Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1251 188 9e-43 >seq1251 Length=5235866 Score = 188 bits (208), Expect = 9e-43 Identities = 752/1164 (65%), Gaps = 36/1164 (3%) Strand=Plus/Minus Query 110938 TTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGC 110997 ||| ||||||||||| || ||||| | | | ||| ||| || |||||||| || | Sbjct 3095759 TTCTGCCAATTCACAACTTGCCTCTAAAGCTCCGTAATAAATAGTTTCAAATATTTGTTG 3095700 Query 110998 ATTCATCTCCTTGGC---TTCATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACAT 111053 |||| | | || |||| | ||| ||| ||| ||| || | |||| || Sbjct 3095699 GTTCAGTTTGATAGCAGTTTCACTT---TCATATG-GTATGCGCATTAATACAAATGTAT 3095644 Query 111054 CCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAG 111113 | || | ||||| ||||| | |||||||||||||| | |||||| || ||| | || Sbjct 3095643 CTGCTAATCCTTGTACACCGATTCCAATAGGTCTGTGCCTCATATTTGATTTTTGGGCT- 3095585 Query 111114 TCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCT 111170 ||| || ||||| |||| ||||| | | |||||||| | |||||| |||| Sbjct 3095584 --TCAGGCACTGGATAGTAATTGACATCAATAATTTTATTTAGATTCTGGGTAACTATCT 3095527 Query 111171 TTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTG 111230 |||||| || | |||||| | | | |||| | || ||||| ||| || | Sbjct 3095526 TTGTGACCTCTTTAAGTTTGGTAAAGTTGTAAGTTT---TGTCATCATTCACAAACATGT 3095470 Query 111231 GAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAA 111290 | || || ||||| || || ||||| || || ||||| | ||| ||||| | || Sbjct 3095469 TCAAAGCAATAGATGCTAAGTTACAAACTGCTGTTTCATCTGCAGATGTATACTCAACAA 3095410 Query 111291 TTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGT 111350 ||||||| || |||||| || ||||| || || | ||| || || ||||||||| | | Sbjct 3095409 TTTCTGTGCACAAGTTGCTACATTTAATTGTGCCTAGATTTTTCTGATTACTCTTCCTAT 3095350 Query 111351 TGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAG 111410 | || ||||||||||| | ||| || || || || || || |||| || | ||||| Sbjct 3095349 TACAGGCATCCTTGTATAACATATATGGTGTTCCAGTTTCTACTTGTGCTTCAATAATAG 3095290 Query 111411 CCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGC---CCGTCCCTCCGCCTCGTAC 111466 | ||||| | ||| | ||| || || || | ||| ||| || || Sbjct 3095289 CTTTCCACAGTATCTG-TGCTTTGAC-TTG--TTTCACATAACGTTTTTCCTGTTCATAT 3095234 Query 111467 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCGGAGAGACCTGGTGCCTTGTC 111525 ||| || | || |||||||| |||||| | || |||| | |||||| | | | Sbjct 3095233 TTTTCATACAAAGCCTCAAACTCTTCACCC-CAGCAATCGGCTAAACCTGGAGAATCATG 3095175 Query 111526 TGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585 || || | || | ||| | || || ||||| || ||||| || | |||||||| Sbjct 3095174 AGGGCACATAATACTCCAATCTTCATTTTTTTCAACACGTTTCATAAATAAATCTGGAAT 3095115 Query 111586 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645 |||||| | ||||||| ||||| || | || || | ||| || || | ||| Sbjct 3095114 CCACAGTGCATAAAAGAGTTCTCTTGCACGTACTTCCTCTTTACCATGATTCTTTTTTAA 3095055 Query 111646 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTT 111705 || || ||||| | ||||| || ||||| || || | ||| ||||||| || ||| Sbjct 3095054 ATCTAGAAACTCGAATATATCAGCATGCCAGGGTTCTAAATACACTGCGAAAGCGCCCGG 3094995 Query 111706 TCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGG 111762 || | || |||| | ||||| | || ||| || | || || | ||| || Sbjct 3094994 CCGTTTATTGCCGCCTTGGTCCACATATCTGGCAGTGTTATTGTAAACACGCAACATAGG 3094935 Query 111763 AATAATACCATCTGATTGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCTCTCACA 111820 | ||||||| ||| ||||||||| || || || | | | |||||||| | Sbjct 3094934 CACTATACCATTTGAGACACCATTTGTTCCAGCAATGTAGGTGCCT--TTGGCTCTAATG 3094877 Query 111821 TCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGA 111880 || | || | |||||||| ||||| | || ||||| ||||||| | | | Sbjct 3094876 CAGTGCACATGAACACCAATACCACCAGCTGATTTAGAGATCAAAGCACACTGTTTCAAA 3094817 Query 111881 GTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATC 111940 || |||| || || | || ||| || | | || | ||| || || |||| | Sbjct 3094816 GTGTCATATATCCCCTCAATGCTGTCATCTCTCATAGCAACAAGAAAACATGAAGACAAC 3094757 Query 111941 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TG 111999 || ||||| || || ||||| || || ||||| | || ||| |||| ||| | | Sbjct 3094756 TGTGGTCTAGGGGTGGCAGCAGCAAAAAGAGTTGGACTCGCATGAGTGAA-ATATTTCTC 3094698 Query 112000 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGC 112059 || | | |||||||| | | | | ||||| ||||| || || || ||||| | Sbjct 3094697 AGATAATAAATTGTATGTCTGAATGGCGGCATCAACATCTTCACCATGTATTCCGATAGA 3094638 Query 112060 GACCCGCATGAACATGTACTGTGG 112083 || | ||| ||||| | ||| || Sbjct 3094637 AACTCTCATTAACATATGCTGCGG 3094614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627974684229600