Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq1251 188 9e-43
>seq1251
Length=5235866
Score = 188 bits (208), Expect = 9e-43
Identities = 752/1164 (65%), Gaps = 36/1164 (3%)
Strand=Plus/Minus
Query 110938 TTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGC 110997
||| ||||||||||| || ||||| | | | ||| ||| || |||||||| || |
Sbjct 3095759 TTCTGCCAATTCACAACTTGCCTCTAAAGCTCCGTAATAAATAGTTTCAAATATTTGTTG 3095700
Query 110998 ATTCATCTCCTTGGC---TTCATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACAT 111053
|||| | | || |||| | ||| ||| ||| ||| || | |||| ||
Sbjct 3095699 GTTCAGTTTGATAGCAGTTTCACTT---TCATATG-GTATGCGCATTAATACAAATGTAT 3095644
Query 111054 CCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAG 111113
| || | ||||| ||||| | |||||||||||||| | |||||| || ||| | ||
Sbjct 3095643 CTGCTAATCCTTGTACACCGATTCCAATAGGTCTGTGCCTCATATTTGATTTTTGGGCT- 3095585
Query 111114 TCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCT 111170
||| || ||||| |||| ||||| | | |||||||| | |||||| ||||
Sbjct 3095584 --TCAGGCACTGGATAGTAATTGACATCAATAATTTTATTTAGATTCTGGGTAACTATCT 3095527
Query 111171 TTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTG 111230
|||||| || | |||||| | | | |||| | || ||||| ||| || |
Sbjct 3095526 TTGTGACCTCTTTAAGTTTGGTAAAGTTGTAAGTTT---TGTCATCATTCACAAACATGT 3095470
Query 111231 GAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAA 111290
| || || ||||| || || ||||| || || ||||| | ||| ||||| | ||
Sbjct 3095469 TCAAAGCAATAGATGCTAAGTTACAAACTGCTGTTTCATCTGCAGATGTATACTCAACAA 3095410
Query 111291 TTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGT 111350
||||||| || |||||| || ||||| || || | ||| || || ||||||||| | |
Sbjct 3095409 TTTCTGTGCACAAGTTGCTACATTTAATTGTGCCTAGATTTTTCTGATTACTCTTCCTAT 3095350
Query 111351 TGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAG 111410
| || ||||||||||| | ||| || || || || || || |||| || | |||||
Sbjct 3095349 TACAGGCATCCTTGTATAACATATATGGTGTTCCAGTTTCTACTTGTGCTTCAATAATAG 3095290
Query 111411 CCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGC---CCGTCCCTCCGCCTCGTAC 111466
| ||||| | ||| | ||| || || || | ||| ||| || ||
Sbjct 3095289 CTTTCCACAGTATCTG-TGCTTTGAC-TTG--TTTCACATAACGTTTTTCCTGTTCATAT 3095234
Query 111467 TTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCGGAGAGACCTGGTGCCTTGTC 111525
||| || | || |||||||| |||||| | || |||| | |||||| | | |
Sbjct 3095233 TTTTCATACAAAGCCTCAAACTCTTCACCC-CAGCAATCGGCTAAACCTGGAGAATCATG 3095175
Query 111526 TGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585
|| || | || | ||| | || || ||||| || ||||| || | ||||||||
Sbjct 3095174 AGGGCACATAATACTCCAATCTTCATTTTTTTCAACACGTTTCATAAATAAATCTGGAAT 3095115
Query 111586 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645
|||||| | ||||||| ||||| || | || || | ||| || || | |||
Sbjct 3095114 CCACAGTGCATAAAAGAGTTCTCTTGCACGTACTTCCTCTTTACCATGATTCTTTTTTAA 3095055
Query 111646 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTT 111705
|| || ||||| | ||||| || ||||| || || | ||| ||||||| || |||
Sbjct 3095054 ATCTAGAAACTCGAATATATCAGCATGCCAGGGTTCTAAATACACTGCGAAAGCGCCCGG 3094995
Query 111706 TCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGG 111762
|| | || |||| | ||||| | || ||| || | || || | ||| ||
Sbjct 3094994 CCGTTTATTGCCGCCTTGGTCCACATATCTGGCAGTGTTATTGTAAACACGCAACATAGG 3094935
Query 111763 AATAATACCATCTGATTGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCTCTCACA 111820
| ||||||| ||| ||||||||| || || || | | | |||||||| |
Sbjct 3094934 CACTATACCATTTGAGACACCATTTGTTCCAGCAATGTAGGTGCCT--TTGGCTCTAATG 3094877
Query 111821 TCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGA 111880
|| | || | |||||||| ||||| | || ||||| ||||||| | | |
Sbjct 3094876 CAGTGCACATGAACACCAATACCACCAGCTGATTTAGAGATCAAAGCACACTGTTTCAAA 3094817
Query 111881 GTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATC 111940
|| |||| || || | || ||| || | | || | ||| || || |||| |
Sbjct 3094816 GTGTCATATATCCCCTCAATGCTGTCATCTCTCATAGCAACAAGAAAACATGAAGACAAC 3094757
Query 111941 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TG 111999
|| ||||| || || ||||| || || ||||| | || ||| |||| ||| | |
Sbjct 3094756 TGTGGTCTAGGGGTGGCAGCAGCAAAAAGAGTTGGACTCGCATGAGTGAA-ATATTTCTC 3094698
Query 112000 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGC 112059
|| | | |||||||| | | | | ||||| ||||| || || || ||||| |
Sbjct 3094697 AGATAATAAATTGTATGTCTGAATGGCGGCATCAACATCTTCACCATGTATTCCGATAGA 3094638
Query 112060 GACCCGCATGAACATGTACTGTGG 112083
|| | ||| ||||| | ||| ||
Sbjct 3094637 AACTCTCATTAACATATGCTGCGG 3094614
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627974684229600
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