Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq1251 156 5e-33
>seq1251
Length=5235866
Score = 156 bits (172), Expect = 5e-33
Identities = 1104/1752 (63%), Gaps = 48/1752 (3%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| | ||||| ||| | || | ||||| || ||||| ||||| ||||| | | |
Sbjct 3094614 CCGCAGCATATGTTAATGAGAGTTTCTATCGGAATACATGGTGAAGATGTTGATGCCGCC 3094673
Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340
| |||||||| | | || | | ||| |||| ||| || | ||||| || ||
Sbjct 3094674 ATTCAGACATACAATTTATTATCTGAGAAATAT-TTCACTCATGCGAGTCCAACTCTTTT 3094732
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
||||| || || ||||| || |||| || || ||| | || | | || ||
Sbjct 3094733 TGCTGCTGCCACCCCTAGACCACAGTTGTCTTCATGTTTTCTTGTTGCTATGAGAGATGA 3094792
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
| || | || || |||| ||| | | ||||||| ||||| || | |||||
Sbjct 3094793 CAGCATTGAGGGGATATATGACACTTTGAAACAGTGTGCTTTGATCTCTAAATCAGCTGG 3094852
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGACA 104518
|||||||| | || | || | |||||||| | | | || || || |||
Sbjct 3094853 TGGTATTGGTGTTCATGTGCACTGCATTAGAGCCAA--AGGCACCTACATTGCTGGAACA 3094910
Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578
|||||| ||| ||||||| | || ||| | || || | || ||| || | |||
Sbjct 3094911 AATGGTGTCTCAAATGGTATAGTGCCTATGTTGCGTGTTTACAATAACACTGCCAGATAT 3094970
Query 104579 GTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCAC 104635
|| | |||| || | || ||| || ||||||| ||| | || || |||||
Sbjct 3094971 GTGGACCAAGGCGGCAATAAACGGCCGGGCGCTTTCGCAGTGTATTTAGAACCCTGGCAT 3095030
Query 104636 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC 104695
|| ||||| | ||||| || || || || || ||| | ||||| | || |||
Sbjct 3095031 GCTGATATATTCGAGTTTCTAGATTTAAAAAAGAATCATGGTAAAGAGGAAGTACG-TGC 3095089
Query 104696 C-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 104754
| || ||||| | || || |||||||||||| | || ||||| | ||||| | |
Sbjct 3095090 AAGAGAACTCTTTTATGCACTGTGGATTCCAGATTTATTTATGAAACGTGTTGAAAAAAA 3095149
Query 104755 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGA 104814
|| ||||| | | | || || | | | || ||| | ||||| | ||||||
Sbjct 3095150 TGAAGATTGGAGTATTATGTGCCCTCATGATTCTCCAGGTTTAGCCGATTGCTGGGGTGA 3095209
Query 104815 GGAGTTTGAAGCCCTTTACACAAAGTACGA---GGAAGAAGGTCGGGCGACTGCGACGGT 104871
|||||||| || | || ||| || || |||| || || | || | | ||
Sbjct 3095210 AGAGTTTGAGGCTTTGTATGAAAAATATGAACAGGAAAAACGTTATGTGAAA-CAA--GT 3095266
Query 104872 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930
||| | ||| |||||||||||||| | | | ||| || ||||| |||||||
Sbjct 3095267 CAAAGCA-CAGATACTGTGGAAAGCTATTATTGAAGCACAAGTAGAAACTGGAACACCAT 3095325
Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990
| ||| | ||||| || |||||||| ||||||||||| || ||| | || || |
Sbjct 3095326 ATATGTTATACAAGGATGCCTGTAATAGGAAGAGTAATCAGAAAAATCTAGGCACAATTA 3095385
Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050
| || ||| | || |||||||| | || | |||| |||||| || || || |
Sbjct 3095386 AATGTAGCAACTTGTGCACAGAAATTGTTGAGTATACATCTGCAGATGAAACAGCAGTTT 3095445
Query 105051 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGACATTTGAT 105109
||||| | ||||| || ||| | || || |||| || || |||||| || | |
Sbjct 3095446 GTAACTTAGCATCTATTGCTTTGAACATGTTTGTGAAT---GATGACAAA-ACTTACAAC 3095501
Query 105110 TATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGAT 105169
| | ||||| | || || || || | || ||| | || ||||| | | ||||||||
Sbjct 3095502 TTTACCAAACTTAAAGAGGTCACAAAGATAGTTACCCAGAATCTAAATAAAATTATTGAT 3095561
Query 105170 AGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 105226
|||| || || || ||| || | ||||| |||||||| ||| | || |||
Sbjct 3095562 GTCAATTACTATCCAGTGCCTGA---AGCCCAAAAATCAAATATGAGGCACAGACCTATT 3095618
Query 105227 GGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCC 105286
|| ||||||| || || | || ||| ||| | | ||| ||| |||
Sbjct 3095619 GGAATCGGTGTACAAGGATTAGCAGATACATTTGTATTAATGCGCATACCATATGAAAGT 3095678
Query 105287 GACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAG 105346
|| || | || | || | |||||||| || || ||| ||| ||| | |||
Sbjct 3095679 GAAACTGCTATCAAACTGAACCAACAAATATTTGAAACTATTTATTACGGAGCTTTAGAG 3095738
Query 105347 GCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCT 105406
|| |||| || |||||||| |||| ||||| || | | | ||| ||| |
Sbjct 3095739 GCAAGTTGTGAATTGGCAGAAAAATATGGGGTGTATGAGACATATCATGGTAGTCCTG-- 3095796
Query 105407 TCA--CAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAA-GCTTCACTACGAC 105463
||| || ||| | | |||| ||| |||| |||| | |||| | || |||
Sbjct 3095797 TCAGTCAGGGGATATTACAATATGAGATGT-GGAACAAAACTCCAACAGACCTCTGGGAC 3095855
Query 105464 TGGGAAGCTCTCAAGGAACGCAT--CAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGG 105521
||| | || | || || || ||| | | || ||||| || || || | |
Sbjct 3095856 TGGCAGGCATTGAAAGACAAAATTGCAA--AACATGGACTTCGCAATTCACTACTAGTAG 3095913
Query 105522 CTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCT 105581
|||| ||||| || || || || |||||||| | || || ||||||| ||||| || |
Sbjct 3095914 CTCCTATGCCTACTGCTTCAACAGCACAAATACTTGGAAACAATGAATCTTTTGAGCCTT 3095973
Query 105582 ACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGC 105641
||| | || || || | ||| | | | ||||| || ||||||| | |
Sbjct 3095974 TCACATCTAATATTTACCAAAGACGTGTATTATCAGGAGAATTCCAAGTTGTCAATCATC 3096033
Query 105642 ATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGG 105701
| | || ||| | | ||| || || ||| | |||||||| |||||||
Sbjct 3096034 ACTTATTGCGTGATTTAACAGAAGCTGAGCTATGGGATGAAGATATGAAAAATCTCATTA 3096093
Query 105702 TGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGA-AGTTG 105760
| | ||| || ||||||||||||| ||||| || || | ||||| | |||
Sbjct 3096094 TTCATAATAATGGATCAATTCAAAATATTGAAACCATTCCCAAAGATA-TAAGAGACTTG 3096152
Query 105761 TACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGT 105820
||| || |||||||| || | || | |||| | ||||| ||||| | |||
Sbjct 3096153 TACAAAACTGTTTGGGAGATTTCAGTCAAAACTACCATTCAAATGGCGGCAGACAGAGGT 3096212
Query 105821 CGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGA---AAGTCCAACGATGTCC 105877
||||| |||||||| || | || | | |||| | || | || |||
Sbjct 3096213 GCATTCATAGATCAAAGCCAGTCATTTAA--TATACATGTAGCTGAGCCAAATTATG-GA 3096269
Query 105878 AAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTAC 105937
|| || ||||||| ||| | || |||||| | |||||||||||| || ||||||||
Sbjct 3096270 AAACTAACTTCTATACACTTTTATGCTTGGAAAATGGGTCTCAAAACTGGAATGTATTAT 3096329
Query 105938 CTCCGATCTAAG 105949
|| ||| | |||
Sbjct 3096330 CTACGAACAAAG 3096341
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583207570161240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |