Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1251 156 5e-33 >seq1251 Length=5235866 Score = 156 bits (172), Expect = 5e-33 Identities = 1104/1752 (63%), Gaps = 48/1752 (3%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| | ||||| ||| | || | ||||| || ||||| ||||| ||||| | | | Sbjct 3094614 CCGCAGCATATGTTAATGAGAGTTTCTATCGGAATACATGGTGAAGATGTTGATGCCGCC 3094673 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | |||||||| | | || | | ||| |||| ||| || | ||||| || || Sbjct 3094674 ATTCAGACATACAATTTATTATCTGAGAAATAT-TTCACTCATGCGAGTCCAACTCTTTT 3094732 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||||| || || ||||| || |||| || || ||| | || | | || || Sbjct 3094733 TGCTGCTGCCACCCCTAGACCACAGTTGTCTTCATGTTTTCTTGTTGCTATGAGAGATGA 3094792 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 | || | || || |||| ||| | | ||||||| ||||| || | ||||| Sbjct 3094793 CAGCATTGAGGGGATATATGACACTTTGAAACAGTGTGCTTTGATCTCTAAATCAGCTGG 3094852 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGACA 104518 |||||||| | || | || | |||||||| | | | || || || ||| Sbjct 3094853 TGGTATTGGTGTTCATGTGCACTGCATTAGAGCCAA--AGGCACCTACATTGCTGGAACA 3094910 Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578 |||||| ||| ||||||| | || ||| | || || | || ||| || | ||| Sbjct 3094911 AATGGTGTCTCAAATGGTATAGTGCCTATGTTGCGTGTTTACAATAACACTGCCAGATAT 3094970 Query 104579 GTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCAC 104635 || | |||| || | || ||| || ||||||| ||| | || || ||||| Sbjct 3094971 GTGGACCAAGGCGGCAATAAACGGCCGGGCGCTTTCGCAGTGTATTTAGAACCCTGGCAT 3095030 Query 104636 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC 104695 || ||||| | ||||| || || || || || ||| | ||||| | || ||| Sbjct 3095031 GCTGATATATTCGAGTTTCTAGATTTAAAAAAGAATCATGGTAAAGAGGAAGTACG-TGC 3095089 Query 104696 C-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 104754 | || ||||| | || || |||||||||||| | || ||||| | ||||| | | Sbjct 3095090 AAGAGAACTCTTTTATGCACTGTGGATTCCAGATTTATTTATGAAACGTGTTGAAAAAAA 3095149 Query 104755 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGA 104814 || ||||| | | | || || | | | || ||| | ||||| | |||||| Sbjct 3095150 TGAAGATTGGAGTATTATGTGCCCTCATGATTCTCCAGGTTTAGCCGATTGCTGGGGTGA 3095209 Query 104815 GGAGTTTGAAGCCCTTTACACAAAGTACGA---GGAAGAAGGTCGGGCGACTGCGACGGT 104871 |||||||| || | || ||| || || |||| || || | || | | || Sbjct 3095210 AGAGTTTGAGGCTTTGTATGAAAAATATGAACAGGAAAAACGTTATGTGAAA-CAA--GT 3095266 Query 104872 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930 ||| | ||| |||||||||||||| | | | ||| || ||||| ||||||| Sbjct 3095267 CAAAGCA-CAGATACTGTGGAAAGCTATTATTGAAGCACAAGTAGAAACTGGAACACCAT 3095325 Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990 | ||| | ||||| || |||||||| ||||||||||| || ||| | || || | Sbjct 3095326 ATATGTTATACAAGGATGCCTGTAATAGGAAGAGTAATCAGAAAAATCTAGGCACAATTA 3095385 Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050 | || ||| | || |||||||| | || | |||| |||||| || || || | Sbjct 3095386 AATGTAGCAACTTGTGCACAGAAATTGTTGAGTATACATCTGCAGATGAAACAGCAGTTT 3095445 Query 105051 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGACATTTGAT 105109 ||||| | ||||| || ||| | || || |||| || || |||||| || | | Sbjct 3095446 GTAACTTAGCATCTATTGCTTTGAACATGTTTGTGAAT---GATGACAAA-ACTTACAAC 3095501 Query 105110 TATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGAT 105169 | | ||||| | || || || || | || ||| | || ||||| | | |||||||| Sbjct 3095502 TTTACCAAACTTAAAGAGGTCACAAAGATAGTTACCCAGAATCTAAATAAAATTATTGAT 3095561 Query 105170 AGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 105226 |||| || || || ||| || | ||||| |||||||| ||| | || ||| Sbjct 3095562 GTCAATTACTATCCAGTGCCTGA---AGCCCAAAAATCAAATATGAGGCACAGACCTATT 3095618 Query 105227 GGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCC 105286 || ||||||| || || | || ||| ||| | | ||| ||| ||| Sbjct 3095619 GGAATCGGTGTACAAGGATTAGCAGATACATTTGTATTAATGCGCATACCATATGAAAGT 3095678 Query 105287 GACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAG 105346 || || | || | || | |||||||| || || ||| ||| ||| | ||| Sbjct 3095679 GAAACTGCTATCAAACTGAACCAACAAATATTTGAAACTATTTATTACGGAGCTTTAGAG 3095738 Query 105347 GCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCT 105406 || |||| || |||||||| |||| ||||| || | | | ||| ||| | Sbjct 3095739 GCAAGTTGTGAATTGGCAGAAAAATATGGGGTGTATGAGACATATCATGGTAGTCCTG-- 3095796 Query 105407 TCA--CAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAA-GCTTCACTACGAC 105463 ||| || ||| | | |||| ||| |||| |||| | |||| | || ||| Sbjct 3095797 TCAGTCAGGGGATATTACAATATGAGATGT-GGAACAAAACTCCAACAGACCTCTGGGAC 3095855 Query 105464 TGGGAAGCTCTCAAGGAACGCAT--CAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGG 105521 ||| | || | || || || ||| | | || ||||| || || || | | Sbjct 3095856 TGGCAGGCATTGAAAGACAAAATTGCAA--AACATGGACTTCGCAATTCACTACTAGTAG 3095913 Query 105522 CTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCT 105581 |||| ||||| || || || || |||||||| | || || ||||||| ||||| || | Sbjct 3095914 CTCCTATGCCTACTGCTTCAACAGCACAAATACTTGGAAACAATGAATCTTTTGAGCCTT 3095973 Query 105582 ACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGC 105641 ||| | || || || | ||| | | | ||||| || ||||||| | | Sbjct 3095974 TCACATCTAATATTTACCAAAGACGTGTATTATCAGGAGAATTCCAAGTTGTCAATCATC 3096033 Query 105642 ATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGG 105701 | | || ||| | | ||| || || ||| | |||||||| ||||||| Sbjct 3096034 ACTTATTGCGTGATTTAACAGAAGCTGAGCTATGGGATGAAGATATGAAAAATCTCATTA 3096093 Query 105702 TGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGA-AGTTG 105760 | | ||| || ||||||||||||| ||||| || || | ||||| | ||| Sbjct 3096094 TTCATAATAATGGATCAATTCAAAATATTGAAACCATTCCCAAAGATA-TAAGAGACTTG 3096152 Query 105761 TACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGT 105820 ||| || |||||||| || | || | |||| | ||||| ||||| | ||| Sbjct 3096153 TACAAAACTGTTTGGGAGATTTCAGTCAAAACTACCATTCAAATGGCGGCAGACAGAGGT 3096212 Query 105821 CGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGA---AAGTCCAACGATGTCC 105877 ||||| |||||||| || | || | | |||| | || | || ||| Sbjct 3096213 GCATTCATAGATCAAAGCCAGTCATTTAA--TATACATGTAGCTGAGCCAAATTATG-GA 3096269 Query 105878 AAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTAC 105937 || || ||||||| ||| | || |||||| | |||||||||||| || |||||||| Sbjct 3096270 AAACTAACTTCTATACACTTTTATGCTTGGAAAATGGGTCTCAAAACTGGAATGTATTAT 3096329 Query 105938 CTCCGATCTAAG 105949 || ||| | ||| Sbjct 3096330 CTACGAACAAAG 3096341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583207570161240