Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1346 93.3 5e-14 >seq1346 Length=947742 Score = 93.3 bits (102), Expect = 5e-14 Identities = 158/224 (71%), Gaps = 5/224 (2%) Strand=Plus/Minus Query 59892 CTGTTCCGTGCCATAGAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCA 59950 |||||| |||||| ||||| | ||| || || || | || || || ||||| |||| Sbjct 445290 CTGTTCAATGCCATTGAGACCCTGCCCTGC-GTGAAGAAGAAGGCCGACTGGGCATTGCA 445232 Query 59951 GTGGAT-GAGTCCTGGA--GCATCATTTGCACAACGTCTCATAGCTTTTGCATGCGTGGA 60007 |||||| | | || || |||||| | |||| | | ||||||||| || || Sbjct 445231 GTGGATCGCCAGCAAGACTGCCACATTTGGAGAACGAATTGTGGCTTTTGCAGCAGTCGA 445172 Query 60008 AGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCAT 60067 ||| ||||||||||| ||| ||| | | || |||||||| || ||| | || ||||| Sbjct 445171 AGGCATCTTCTTCTCGGGCAGTTTCGCTTCCATCTTCTGGCTGAAGAAGAGGGGGCTCAT 445112 Query 60068 GCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGG 60111 ||| || || | |||| ||| || |||||||| | || |||| Sbjct 445111 GCCTGGGCTTACTTTCAGCAATGAACTGATTTCTAGAGATGAGG 445068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548474740255440