Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1281 98.7 1e-15 >seq1281 Length=644356 Score = 98.7 bits (108), Expect = 1e-15 Identities = 119/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 151992 CGGATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGC 152051 ||||| ||||||| | || || | || || ||||||||||||| || | |||||| Sbjct 548285 CGGATGGAATATCAGCCGTGTGAGCTGAGACATGAGCGTGAAGATGTACCGCGGGCTGGC 548226 Query 152052 CGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAG 152111 |||||||| || ||||||||| || ||||| || |||| || ||||| | Sbjct 548225 GCTGTCCTTGCCGCCGCACAGCCGCGTGCCGAACTGGCCGCGCGGCTGCAGCAGGTTCAC 548166 Query 152112 GTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGT 152153 |||||||| ||||||| | ||||| |||| ||||| ||||| Sbjct 548165 GTTGTTGGAGCCCACGTAGTTCTGCGCCAGGTTCACTATCGT 548124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547166059699800