Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq1207 140 2e-28
seq1168 125 4e-24
seq1196 89.7 3e-13
>seq1207
Length=6027761
Score = 140 bits (154), Expect = 2e-28
Identities = 170/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | ||||| || | ||| || ||||| ||||| ||||| ||
Sbjct 3525244 CCACCACGAAGACGGAGTACCAAGTGCAAGGTGGATTCTTTTTGTATGTTGTAATCAGAG 3525303
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || ||||||| | ||||||||| || || || | |||||||||||| || ||
Sbjct 3525304 AGGGTGCGTCCGTCTTCCAATTGTTTACCAGCGAAGATCAGACGCTGTTGGTCTGGAGGG 3525363
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| ||| ||| | |||||| | ||||||||| ||| ||
Sbjct 3525364 ATACCCTCCTTGTC-CTGAATTTTGGCTTTAACATTTTCAATTGTGTCAGATGGCTCAAC 3525422
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
||| | ||||| |||||||| ||||| ||||||||||| |||||||||
Sbjct 3525423 TTCTAAAGTTATAGTTTTACCAGTTAAAGTTTTCACAAATATCTGCATG 3525471
Score = 118 bits (130), Expect = 7e-22
Identities = 167/230 (73%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | ||| || || ||||| ||||| ||||||||||||||| || || |||
Sbjct 2997797 CCACCTCTCAAACGTAATACTAAATGTAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAA 2997856
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || ||||||| | || || || || || || || ||||| ||||| || ||
Sbjct 2997857 AGCGTGCGTCCGTCTTCCAACTGCTTGCCTGCGAAGATCAATCGCTGCTGGTCTGGGGGA 2997916
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCT--TCGCTCTCC 34656
| || ||||||||| ||| ||| | ||||| | || |||||| | |||||
Sbjct 2997917 ATGCCTTCCTTGTCT-TGAATTTTAGCCTTAACATTTTCGATAGTGTCTGATGGCTCT-- 2997973
Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| | ||| || ||||| ||||| || || || || ||||| |||||
Sbjct 2997974 ACTTCTAAGGTGATGGTTTTTCCGGTCAATGTCTTGACGAAAATTTGCAT 2998023
Score = 111 bits (122), Expect = 1e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || | |||||| | || | ||||||||| |||||| || ||||| || || ||
Sbjct 3526383 GCCACCACGAAGACGAAGGACTAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGA 3526442
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
| || || | ||||| | ||| || || ||||| || |||||||||||||| || ||
Sbjct 3526443 CAAGGTGCGGCCATCTTCCAATTGCTTGCCAGCAAAGATCAAACGCTGTTGGTCTGGGGG 3526502
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| || ||||||||| ||| ||| | ||| || | ||||||||| ||||
Sbjct 3526503 GATGCCTTCCTTGTCTTGGAT-TTTAGCTTTGACATTCTCAATTGTGTCAGAAGGTTCCA 3526561
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|||| | ||| || || || || || | || || |||||||||||||||
Sbjct 3526562 CTTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTAACAAAAATCTGCATG 3526611
Score = 111 bits (122), Expect = 1e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || | |||||| | || | ||||||||| |||||| || ||||| || || ||
Sbjct 3527523 GCCACCACGAAGACGAAGGACTAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGA 3527582
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
| || || | ||||| | ||| || || ||||| || |||||||||||||| || ||
Sbjct 3527583 CAAGGTGCGGCCATCTTCCAATTGCTTGCCAGCAAAGATCAAACGCTGTTGGTCTGGGGG 3527642
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| || ||||||||| ||| ||| | ||| || | ||||||||| ||||
Sbjct 3527643 GATGCCTTCCTTGTCTTGGAT-TTTAGCTTTGACATTCTCAATTGTGTCAGAAGGTTCCA 3527701
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|||| | ||| || || || || || | || || |||||||||||||||
Sbjct 3527702 CTTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTAACAAAAATCTGCATG 3527751
Score = 109 bits (120), Expect = 3e-19
Identities = 165/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||||| ||||| || ||||| ||||||||||| || ||||| |||
Sbjct 2996231 CCACCACGAAGACGCAGTACCAAGTGAAGAGTAGATTCCTTTTGAATATTGTAATCGGAA 2996290
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | ||||| | || || || || || || || ||||| ||||| || ||
Sbjct 2996291 AGCGTGCGTCCATCTTCCAACTGCTTGCCTGCGAAGATCAATCGCTGCTGGTCTGGAGGA 2996350
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCT--TCGCTCTCC 34656
| || ||||||||| ||| ||| | ||||| | || |||||| | |||||
Sbjct 2996351 ATGCCTTCCTTGTCT-TGAATTTTAGCCTTAACATTTTCGATAGTGTCTGATGGCTCT-- 2996407
Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| | ||| || ||||| ||||| || || || || ||||| |||||
Sbjct 2996408 ACTTCTAAGGTGATGGTTTTTCCGGTCAATGTCTTGACGAAAATTTGCAT 2996457
Score = 107 bits (118), Expect = 1e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
|||||||||||||| || ||||| ||||| || |||||||| ||||| || || ||
Sbjct 3527305 AGACGCAACACCAAGTGAAGAGTCGATTCCTTCTGGATGTTATAGTCTGAGAGAGTGCGA 3527364
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| ||||| | || || |||||||| || |||||||| ||||| || || | ||||||
Sbjct 3527365 CCATCTTCCAACTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCTGGGGGAATTCCCTCT 3527424
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTT 34668
|| || ||||| ||| | | ||| ||||| ||| ||||| | ||
Sbjct 3527425 TTATCCTGAATCTTAGCTTTGACATTTTCAATGGTGTCAGAAGGCTCAACTTCAAGTGTG 3527484
Query 34669 ATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|| ||||| || || | ||||| || || |||||||||
Sbjct 3527485 ATAGTTTTCCCAGTAAGAGTTTTAACGAAGATCTGCATG 3527523
Score = 105 bits (116), Expect = 4e-18
Identities = 157/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
|||||||||||||| || || || |||||||| |||||||| ||||| || || ||
Sbjct 3526165 AGACGCAACACCAAGTGAAGGGTTGATTCCTTTTGGATGTTATAGTCTGAGAGAGTGCGA 3526224
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| ||||| | || || |||||||| || |||||||| ||||| || || | ||||||
Sbjct 3526225 CCATCTTCCAACTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCTGGGGGAATTCCCTCT 3526284
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|| || ||| || | ||| || | ||| ||||| ||| ||||| | ||
Sbjct 3526285 TTATC-CTGAATCTTAGCTTTGACATTCTCAATGGTGTCAGAAGGCTCAACTTCAAGTGT 3526343
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|| ||||| || || | ||||| || || |||||||||
Sbjct 3526344 GATAGTTTTCCCAGTAAGAGTTTTAACGAAGATCTGCATG 3526383
Score = 105 bits (116), Expect = 4e-18
Identities = 157/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | || | ||||||||| |||||| || ||||| || || || | || ||
Sbjct 3526621 AGACGAAGAACTAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGG 3526680
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| ||||| | ||| || || ||||| || |||||||||||||| || || | || |||
Sbjct 3526681 CCATCTTCCAATTGCTTGCCAGCAAAGATCAAACGCTGTTGGTCTGGGGGGATGCCTTCC 3526740
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|||||| ||| ||| | ||| || | ||||||||| |||||||| | |||
Sbjct 3526741 TTGTCTTGGAT-TTTAGCTTTGACATTCTCAATTGTGTCAGAAGGTTCCACTTCAAGGGT 3526799
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|| || || || || | || || |||||||||||||||
Sbjct 3526800 GATGGTCTTTCCAGTGAGGGTCTTAACAAAAATCTGCATG 3526839
Score = 105 bits (116), Expect = 4e-18
Identities = 157/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | || | ||||||||| |||||| || ||||| || || || | || ||
Sbjct 3526849 AGACGAAGAACTAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGG 3526908
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| ||||| | ||| || || ||||| || |||||||||||||| || || | || |||
Sbjct 3526909 CCATCTTCCAATTGCTTGCCAGCAAAGATCAAACGCTGTTGGTCTGGGGGGATGCCTTCC 3526968
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|||||| ||| ||| | ||| || | ||||||||| |||||||| | |||
Sbjct 3526969 TTGTCTTGGAT-TTTAGCTTTGACATTCTCAATTGTGTCAGAAGGTTCCACTTCAAGGGT 3527027
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|| || || || || | || || |||||||||||||||
Sbjct 3527028 GATGGTCTTTCCAGTGAGGGTCTTAACAAAAATCTGCATG 3527067
Score = 102 bits (112), Expect = 5e-17
Identities = 158/223 (71%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||||| |||||| || || || ||||||||||| || || || || || || ||
Sbjct 3527989 AGACGCAGCACCAAGTGAAGGGTTGATTCCTTTTGAATATTGTAGTCGGAGAGGGTGCGA 3528048
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
||||||| | ||||| || || || || | ||||| || || ||||| | || ||
Sbjct 3528049 CCGTCTTCCAACTGTTTTCCAGCGAAGATCAGGCGCTGCTGATCAGGCGGAATGCCTTCT 3528108
Query 34609 TTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|||||| ||| ||| | ||| ||| | ||||| || | || ||||||| ||
Sbjct 3528109 TTGTCTTGGAT-TTTGGCTTTTACGTTTTCGATTGTATCAGAGGGTTCAACTTCCAATGT 3528167
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710
|| |||||||| || || || || || ||||||||||| |||
Sbjct 3528168 AATGGTTTTACCAGTCAAGGTCTTAACGAAAATCTGCATTTTG 3528210
Score = 100 bits (110), Expect = 2e-16
Identities = 154/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 34492 CGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCG 34551
|||| |||||| || || || ||||||||| || ||||| ||||| || || || |
Sbjct 3525712 CGCAGCACCAAGTGAAGGGTTGACTCCTTTTGGATATTATAGTCTGAGAGAGTGCGGCCA 3525771
Query 34552 TCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTG 34611
||||| | || || || || || || |||||||| ||||| || || | |||||| |||
Sbjct 3525772 TCTTCCAACTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCTGGGGGAATTCCCTCTTTG 3525831
Query 34612 TCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCACTTCCACGGTTAT 34670
|| ||| ||| | |||||| | || ||||| |||||||| | || ||
Sbjct 3525832 TCC-TGAATTTTAGCTTTAACATTCTCGATGGTGTCAGAAGGTTCCACTTCAAGTGTGAT 3525890
Query 34671 CGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
||||| || || | || || |||||||||||||||
Sbjct 3525891 GGTTTTTCCAGTGAGGGTCTTAACAAAAATCTGCATG 3525927
Score = 89.7 bits (98), Expect = 3e-13
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
|| ||||| | ||| || || ||||| ||||| || || || || || | |||||
Sbjct 3525490 ACTAAATGCAATGTGGATTCTTTCTGAATATTATAGTCAGAGAGGGTACGGCCATCTTCC 3525549
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
| ||| || || || || || |||||||||||||| || || | || ||||||||| |
Sbjct 3525550 AATTGCTTTCCAGCGAAGATCAAACGCTGTTGGTCTGGGGGGATGCCTTCCTTGTCTTGG 3525609
Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676
|| ||| | ||| || | ||||||||| |||||||| | ||| || || ||
Sbjct 3525610 AT-TTTAGCTTTGACATTCTCAATTGTGTCAGAAGGTTCCACTTCAAGGGTGATGGTCTT 3525668
Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|| || | || || || ||||||||||||
Sbjct 3525669 TCCCGTGAGGGTCTTAACGAAAATCTGCATG 3525699
>seq1168
Length=7897672
Score = 125 bits (138), Expect = 4e-24
Identities = 134/177 (76%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 47129 ACTTTTAAAGATTGGCCTCGTGGTTTGCGTCAGAGACCAAAAGAGTTAGCGGACGCGGGC 47188
|| || ||||| ||||| ||| | ||| || | || |||| ||||| || || ||
Sbjct 2386355 ACGTTCAAAGACTGGCCGCGTAGCATGCCCCAAAAGCCGGAAGATTTAGCTGAAGCCGGT 2386414
Query 47189 TTCTTTTATACTGGTGAAGGTGATAAAACGAAGTGTTATTATTGTGATGGTGGTCTGAGA 47248
|| | ||| || || |||| || || || |||||||| || ||||| || || |||| |
Sbjct 2386415 TTTTATTACACCGGCCAAGGCGACAAGACTAAGTGTTACTACTGTGACGGAGGCCTGAAA 2386474
Query 47249 GATTGGAACGAAGAAGATATACCTTGGGAGGAGCACGCTCGTTGGTTTGATCGTTGT 47305
|||||| | |||| ||| |||| |||||| ||||||||||||||||||| ||||||
Sbjct 2386475 GATTGGGAAAAAGACGATGTACCGTGGGAGCAGCACGCTCGTTGGTTTGACCGTTGT 2386531
>seq1196
Length=1288689
Score = 89.7 bits (98), Expect = 3e-13
Identities = 150/212 (71%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556
|||||| || | ||| |||||||||||| || || ||||| | ||| || | |||||
Sbjct 730193 CACCAAGTGCAAGGTGGACTCCTTTTGAATATTGTAGTCTGACAATGTGCGGCCATCTTC 730252
Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616
|||||||| || || || || | ||||| |||||||| || | || ||||| ||| |
Sbjct 730253 CAGTTGTTTGCCAGCGAAGATAAGTCGCTGCTGGTCCGGAGGGATACCTTCCTTATCT-T 730311
Query 34617 GATCTTTTGTTTTAAC-GATAAAATTGTGTC-TTCGCTCTCCACTTCCACGGTTATCGTT 34674
|| ||| | ||| || | || ||||| ||| ||||| || | ||| || ||
Sbjct 730312 GAATTTTGGCTTTCACATTTTCGATGGTGTCAGAAGCT-TCCACCTCAAGGGTGATGGTC 730370
Query 34675 TTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || | ||||| || || ||||||||
Sbjct 730371 TTCCCCGTAAGTGTTTTTACGAAGATCTGCAT 730402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314701595065133
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