Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq1251 581 4e-161
seq1346 95.1 2e-14
>seq1251
Length=5235866
Score = 581 bits (644), Expect = 4e-161
Identities = 1212/1781 (68%), Gaps = 38/1781 (2%)
Strand=Plus/Minus
Query 76771 TCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATAC 76830
||||||||| |||||| ||||| | | | || || ||||| |||||||| ||||| |
Sbjct 3096378 TCTTATCCACTGTAAATTGAATAGCATTGGCGGCAGGCTTTGTTCGTAGATAATACATTC 3096319
Query 76831 CAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAG 76890
||||||| ||||||| |||| | || || || || || ||||| |||| | |
Sbjct 3096318 CAGTTTTGAGACCCATTTTCCAAGCATAAAAGTGTATAGAAGTTAGTTTTCCATAATTTG 3096259
Query 76891 GATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCG 76950
| || |||| ||| ||||| | ||||| |||||||| ||||| || ||||| || ||||
Sbjct 3096258 GCTCAGCTACATGTATATTAAATGACTGGCTTTGATCTATGAATGCACCTCTGTCTGCCG 3096199
Query 76951 CCATTTTTATAATGGTC-TTTTGA--GGAATTTCCCAAATAGTTTTGAAAACTTGTTTGA 77007
|||||| |||||| |||||| | ||| ||||||| ||||||| | | | | | |
Sbjct 3096198 CCATTTG---AATGGTAGTTTTGACTGAAATCTCCCAAACAGTTTTGTACAAGTCTCTTA 3096142
Query 77008 TATCATCTGGAA-GGTTTG--TATTTTGAATGGAACCACCATC-TGATATAATTGTATTC 77063
|||| | |||| ||||| |||||||||| || ||| || ||| ||||| |||
Sbjct 3096141 TATCTTTGGGAATGGTTTCAATATTTTGAATTGATCCATTATTATGA-ATAATGAGATTT 3096083
Query 77064 TTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACT 77123
|| ||||| |||| ||| | | ||||||||| | | | | ||| |||| ||
Sbjct 3096082 TTCATATCTTCATCCCATAGCTCAGCTTCTGTTAAATCACGCAATAAGTGATGATTGACA 3096023
Query 77124 ATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACA 77183
| ||| |||||||| || ||||| | | |||||||||| || | || || | |
Sbjct 3096022 ACTTGGAATTCTCCTGATAATACACGTCTTTGGTAAATATTAGATGTGAAAGGCTCAAAA 3095963
Query 77184 GATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAA 77243
|||||||||||||| | ||||| || || |||||||| |||||||| || || | ||
Sbjct 3095962 GATTCATTGTTTCCAAGTATTTGTGCTGTTGAAGCAGTAGGCATAGGAGCTACTAGTAGT 3095903
Query 77244 CTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCT 77303
||| | || |||||| || ||||| ||||| | | ||| ||||| || |||
Sbjct 3095902 GAATTGCGAAGTCCATGTTTTGCAATTTTGTCTTTCAATGCCTGCCAGTCCCAGAGGTCT 3095843
Query 77304 GAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTA 77363
| || | ||| | || ||||||| || || | ||| || |||| |
Sbjct 3095842 GTTGGAGTTTTGTTCCACATCTCATATTGTAATATCCCCTGACTGACAGGACTACCATGA 3095783
Query 77364 TATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAA 77423
||||| ||||| || | | |||| || | ||||||||| || || || |||||||||
Sbjct 3095782 TATGTCTCATACACCCCATATTTTTCTGCCAATTCACAACTTGCCTCTAAAGCTCCGTAA 3095723
Query 77424 TAAATTGTTTCGAAAATCTTCTTATTGAGAT--CTTG-TGCTTCAATACTATCAAACGGA 77480
||||| ||||| || || | | || || | | | | ||| ||| ||| | ||
Sbjct 3095722 TAAATAGTTTCAAATATTTGTTGGTTCAGTTTGATAGCAGTTTC---ACTTTCATATGG- 3095667
Query 77481 TAATGTAAAAGAAT--AAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTAT 77538
||| | ||| ||| | |||||||||||| || || || || ||||||||||| |
Sbjct 3095666 -TATGCGCATTAATACAAATGTATCTGCTAATCCTTGTACACCGATTCCAATAGGTCTGT 3095608
Query 77539 GTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTAT 77598
| ||| |||| || ||| ||||| || | ||||| ||||| | || ||||||||||
Sbjct 3095607 GCCTCATATTTGATTTTTGGGCTTCAGGCACTGGATAGTAATTGACATCAATAATTTTAT 3095548
Query 77599 TGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAAT--CAAATCTT-C 77655
| ||||| ||||| || || || || ||||| ||| | || | ||
Sbjct 3095547 TTAGATTCTGGGTAACTATCTTTGTGACCTCTTTAAGTTTGGTAAAGTTGTAAGTTTTGT 3095488
Query 77656 CATCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAG 77715
|||| | ||||||||||||||||| |||||||||| |||||||||||| |||| |
Sbjct 3095487 CATCATTCACAAACATGTTCAAAGCAATAGATGCTAAGTTACAAACTGCTGTTTCATCTG 3095428
Query 77716 CGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTT 77775
| | ||| | | || || || || | || |||||||| || ||||| |||||||
Sbjct 3095427 CAGATGTATACTCAACAATTTCTGTGCACAAGTTGCTACATTTAATTGTGCCTAGATTTT 3095368
Query 77776 GTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAA 77835
|| || ||||| |||| || | ||||| || | ||| | || || || ||||| |
Sbjct 3095367 TCTGATTACTCTTCCTATTACAGGCATCCTTGTATAACATATATGGTGTTCCAGTTTCTA 3095308
Query 77836 TCTGTGATTCGATAATAGATTTCCAGACGACTCT-AGCTTTTATCATAGATT--TGTATC 77892
|||| ||| ||||||| |||||| | | ||| ||||| | | | || || |
Sbjct 3095307 CTTGTGCTTCAATAATAGCTTTCCACA-GTATCTGTGCTTTGA--CTTGTTTCACATAAC 3095251
Query 77893 GCCTCTCTCTTTCATA--TTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATC 77950
| | || |||||| || || | |||| ||||| || || ||||| ||| |
Sbjct 3095250 GTTTTTCCTGTTCATATTTTTCATACAAAGCC--TCAAACTCTTCACCCCAGCAATCGGC 3095193
Query 77951 CAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTT 78010
|| || || | |||| |||||||| | ||| || ||| || | ||| |||||
Sbjct 3095192 TAAACCTGGAGAATCATGAGGGCACATAATACTCCAATCTTCATTTTTTTCAACACGTTT 3095133
Query 78011 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATT 78070
|||||| | ||| || ||||| || ||| ||| || |||| | | ||| || ||
Sbjct 3095132 CATAAATAAATCTGGAATCCACAGTGCATAAAAGAGTTCTCTTGCACGTACTTCCTCTTT 3095073
Query 78071 TCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATA 78130
|| ||||||||| | ||| |||||||| | ||||||| |||||| ||||||| |||
Sbjct 3095072 ACCATGATTCTTTTTTAAATCTAGAAACTCGAATATATCAGCATGCCAGGGTTCTAAATA 3095013
Query 78131 TATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATT 78190
| ||| | | | || || |||||||| || || || || | ||||||||| ||||||||
Sbjct 3095012 CACTGCGAAAGCGCCCGGCCGTTTATTGCCGCCTTGGTCCACATATCTGGCAGTGTTATT 3094953
Query 78191 ATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACT 78250
||||| | |||||| || | ||||| || || ||||||||||||| ||| || |
Sbjct 3094952 GTAAACACGCAACATAGGCACTATACCATTTGAGACACCATTTGTTCCAGCAATGTAGGT 3094893
Query 78251 TCCACTTGCGCGAAT--ATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATT 78308
|| | || | ||| | | | ||| | | || || || || || ||||| ||
Sbjct 3094892 GCCTTTGGCTCTAATGCAGTGCACATGAACA--CCAATACCACCAGCTGATTTAGAGATC 3094835
Query 78309 AGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGA 78368
| ||| || ||||||| || || || || ||||| || |||||||| |||| || |
Sbjct 3094834 AAAGCACACTGTTTCAAAGTGTCATATATCCCCTCAATGCTGTCATCTCTCATAGCAACA 3094775
Query 78369 AGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCA 78428
|||||||| ||||| || | | || | ||| ||| | || ||| |||
Sbjct 3094774 AGAAAACATGAAGACAACTGTGGTCTAGGGGTGGCAGCAGCAAAAAGAGTTGGACTCGCA 3094715
Query 78429 TGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCAT 78488
|| || || |||| ||||| | || ||||||||| | ||| || | || | ||
Sbjct 3094714 TGAGTGAAATATTTCTCAGATAATAAATTGTATGTCTGAATGGCGGCATCAACATCTTCA 3094655
Query 78489 TGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGG 78529
||| ||||| | | || | ||| ||||||||||| ||
Sbjct 3094654 CCATGTATTCCGATAGAAACTCTCATTAACATATGCTGCGG 3094614
>seq1346
Length=947742
Score = 95.1 bits (104), Expect = 2e-14
Identities = 79/97 (81%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 48627 TTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTC 48686
||||||| ||| |||||||| | |||||||||||||||||||| || |||||||| |||
Sbjct 446683 TTTGATAAATCCACTTCTTCCACCGTCCAAAATGATGCCTCTGCCTTCTTATACATTTTC 446742
Query 48687 CATATATCACTGTATTGGATTGGGAAAATAACAAATC 48723
||||| || || || || ||||| || |||||||
Sbjct 446743 CATATGTCGGGATACTGAATGGGGAATATTACAAATC 446779
Score = 89.7 bits (98), Expect = 7e-13
Identities = 117/162 (72%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 48432 TACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCT 48491
||||| || || || | |||||| || || ||||| || || |||||| |||| ||||||
Sbjct 446283 TACATCTCAGAATGTACATTTTCCATAGCAATCTGGAACCCATAAAAAAATCTAGCTTCT 446342
Query 48492 GTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTA 48551
|| | || ||||| | |||| ||| | | || ||||| |||||||||||
Sbjct 446343 GTCACTTGGACCTCTTGTGAGAATCTTTCTACTAGGTTTTCATTGACTATTCCATCTGAC 446402
Query 48552 GCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCG 48593
|| || |||||||| | |||||||| || |||| | ||||
Sbjct 446403 GCTGCGAAAAATGCAAGCACATGTTTGATGAAATGTCGTTCG 446444
Score = 86.0 bits (94), Expect = 9e-12
Identities = 156/226 (69%), Gaps = 3/226 (1%)
Strand=Plus/Plus
Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224
||||||||| ||| | ||| || || || || || ||||| || || | || ||
Sbjct 445070 TCATCTCTAGAAATCAGTTCATTGCTGAAAGTAAGCCCAGGCATGAGCCCCCTCTTCTTC 445129
Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCG 48284
||||| || || | |||||| || || ||||| |||||||| || || ||||| ||
Sbjct 445130 AGCCAGAAGATGGAAGCGAAACTGCCCGAGAAGAAGATGCCTTCGACTGCTGCAAAAGCC 445189
Query 48285 GTAAGTCTCTCTCCGTAACTGGCTTCGTTG-TGT--ATCCACCGTTGTGCCCAATCAGCC 48341
|| || ||||| | |||| ||| || |||||| | |||||| || |||
Sbjct 445190 ACAATTCGTTCTCCAAATGTGGCAGTCTTGCTGGCGATCCACTGCAATGCCCAGTCGGCC 445249
Query 48342 TTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGT 48387
|||||||| || || |||| || || || ||||| || || ||||
Sbjct 445250 TTCTTCTTCACGCAGGGCAGGGTCTCAATGGCATTGAACAGGAAGT 445295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694605402788640
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