Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq1251 643 2e-179
seq1353 95.1 2e-14
seq1346 95.1 2e-14
>seq1251
Length=5235866
Score = 643 bits (712), Expect = 2e-179
Identities = 1224/1779 (69%), Gaps = 34/1779 (2%)
Strand=Plus/Minus
Query 75366 TCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATAC 75425
||||||||| || || ||||| | | || || || ||||| |||||||| ||||| |
Sbjct 3096378 TCTTATCCACTGTAAATTGAATAGCATTGGCGGCAGGCTTTGTTCGTAGATAATACATTC 3096319
Query 75426 CAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCG 75485
||||||| ||||||| |||| | || || || || |||||||| |||| | |
Sbjct 3096318 CAGTTTTGAGACCCATTTTCCAAGCATAAAAGTGTATAGAAGTTAGTTTTCCATAATTTG 3096259
Query 75486 GATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCG 75545
| || |||| ||| ||||| | ||||| |||||||| ||||| || ||||| || ||||
Sbjct 3096258 GCTCAGCTACATGTATATTAAATGACTGGCTTTGATCTATGAATGCACCTCTGTCTGCCG 3096199
Query 75546 CCATTTTTATAATGGTC-TTTTGA--GGAATTTCCCAAATAGTTTTGAAAACTTGTTTGA 75602
|||||| |||||| |||||| | ||| ||||||| ||||||| | | | | | |
Sbjct 3096198 CCATTTG---AATGGTAGTTTTGACTGAAATCTCCCAAACAGTTTTGTACAAGTCTCTTA 3096142
Query 75603 TATCATCTGGAA-GATTTG--TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCT 75659
|||| | |||| | ||| |||||||||| ||||| || | ||||| ||| |
Sbjct 3096141 TATCTTTGGGAATGGTTTCAATATTTTGAATTGATCCATTATTATGAATAATGAGATTTT 3096082
Query 75660 TGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAA 75719
| || || |||| ||| | | || |||||| | | | | ||| |||| ||||
Sbjct 3096081 TCATATCTTCATCCCATAGCTCAGCTTCTGTTAAATCACGCAATAAGTGATGATTGACAA 3096022
Query 75720 TTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAG 75779
||| |||||||| || ||||| | || |||||||||| || | || || | ||
Sbjct 3096021 CTTGGAATTCTCCTGATAATACACGTCTTTGGTAAATATTAGATGTGAAAGGCTCAAAAG 3095962
Query 75780 ATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAAC 75839
||||||||||||| | ||||| || ||||||||||| |||||||| || || | ||
Sbjct 3095961 ATTCATTGTTTCCAAGTATTTGTGCTGTTGAAGCAGTAGGCATAGGAGCTACTAGTAGTG 3095902
Query 75840 TATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTG 75899
||| | || |||||| || ||||| ||||| | | ||| ||||| || ||||
Sbjct 3095901 AATTGCGAAGTCCATGTTTTGCAATTTTGTCTTTCAATGCCTGCCAGTCCCAGAGGTCTG 3095842
Query 75900 ATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTAT 75959
||| | ||| | || ||||||| || || | || || |||| ||
Sbjct 3095841 TTGGAGTTTTGTTCCACATCTCATATTGTAATATCCCCTGACTGACAGGACTACCATGAT 3095782
Query 75960 ATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAAT 76019
|||| || || ||| | ||||| || | ||| ||||| |||||||| || |||||||
Sbjct 3095781 ATGTCTCATACACCCCATATTTTTCTGCCAATTCACAACTTGCCTCTAAAGCTCCGTAAT 3095722
Query 76020 AAATTGTTTCGAAAATCTTCTTATTAAGAT--CTTGC-GCTTCAAGACTATCAAAAGGAT 76076
|||| ||||| || || | | || || | | || | ||| ||| ||| | ||
Sbjct 3095721 AAATAGTTTCAAATATTTGTTGGTTCAGTTTGATAGCAGTTTC---ACTTTCATATGG-- 3095667
Query 76077 AATGTAAAAGAAT--AAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATG 76134
||| | ||| ||||| |||||||| ||| || || || || ||||||||||| ||
Sbjct 3095666 TATGCGCATTAATACAAATGTATCTGCTAATCCTTGTACACCGATTCCAATAGGTCTGTG 3095607
Query 76135 TCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATT 76194
||| |||| || ||| ||||| || | || || ||||| | ||| |||||||||||
Sbjct 3095606 CCTCATATTTGATTTTTGGGCTTCAGGCACTGGATAGTAATTGACATCAATAATTTTATT 3095547
Query 76195 GAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAAT--CAAATTTT-CC 76251
||||| | ||||| || || || || |||||| ||| | || |||| |
Sbjct 3095546 TAGATTCTGGGTAACTATCTTTGTGACCTCTTTAAGTTTGGTAAAGTTGTAAGTTTTGTC 3095487
Query 76252 ATCTATCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGC 76311
||| |||||||||| || | ||| |||||||||| |||||||| ||| |||| ||
Sbjct 3095486 ATCATTCACAAACATGTTCAAAGCAATAGATGCTAAGTTACAAACTGCTGTTTCATCTGC 3095427
Query 76312 ATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTG 76371
| | ||| | | || || ||||| | || ||||| || || || || |||||||
Sbjct 3095426 AGATGTATACTCAACAATTTCTGTGCACAAGTTGCTACATTTAATTGTGCCTAGATTTTT 3095367
Query 76372 TTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAAT 76431
|| || ||||| | ||||| | ||||| || | | | | || ||||||||||| |
Sbjct 3095366 CTGATTACTCTTCCTATTACAGGCATCCTTGTATAACATATATGGTGTTCCAGTTTCTAC 3095307
Query 76432 CTGTGATTCGATAATAGATTTCCAGACGACTCT-AGCTTTTATTATAGATT--TGTATCG 76488
|||| ||| ||||||| |||||| | | ||| ||||| | | | || || ||
Sbjct 3095306 TTGTGCTTCAATAATAGCTTTCCACA-GTATCTGTGCTTTGA--CTTGTTTCACATAACG 3095250
Query 76489 CTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAA 76548
|| || |||||||| | ||| || ||||| || || ||||| ||| | ||
Sbjct 3095249 TTTTTCCTGTTCATATTTTTCATACAAAGCCTCAAACTCTTCACCCCAGCAATCGGCTAA 3095190
Query 76549 ACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCAT 76608
||| ||| | |||| || ||||| | ||| || ||| || | ||| ||||||||
Sbjct 3095189 ACCTGGAGAATCATGAGGGCACATAATACTCCAATCTTCATTTTTTTCAACACGTTTCAT 3095130
Query 76609 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTC-TACGTTCTTCATTTC 76667
||| | ||| || ||||| || ||| ||| || |||| | | ||| ||| || || |
Sbjct 3095129 AAATAAATCTGGAATCCACAGTGCATAAAAGAGTTCTCTTGCACGTAC-TTCCTCTTTAC 3095071
Query 76668 CTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATA 76727
| ||||||||| | |||||| ||||| | ||||||| |||||| ||||||| ||| |
Sbjct 3095070 CATGATTCTTTTTTAAATCTAGAAACTCGAATATATCAGCATGCCAGGGTTCTAAATACA 3095011
Query 76728 TCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTAT 76787
|| | | | ||||| |||||||| || || || || | |||||||||||||||||| |
Sbjct 3095010 CTGCGAAAGCGCCCGGCCGTTTATTGCCGCCTTGGTCCACATATCTGGCAGTGTTATTGT 3094951
Query 76788 AAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTC 76847
|||| | |||||| || | || || || || |||||||||||||| ||| || | |
Sbjct 3094950 AAACACGCAACATAGGCACTATACCATTTGAGACACCATTTGTTCCAGCAATGTAGGTGC 3094891
Query 76848 CACATGCACGAAT--ATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAG 76905
| || | ||| | | | || || | || || || || || ||||||||| |
Sbjct 3094890 CTTTGGCTCTAATGCAGTGCACAT-GA-ACACCAATACCACCAGCTGATTTAGAGATCAA 3094833
Query 76906 AGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAG 76965
|||||| ||||||| |||||||| || ||||| || || ||||| |||| || |||
Sbjct 3094832 AGCACACTGTTTCAAAGTGTCATATATCCCCTCAATGCTGTCATCTCTCATAGCAACAAG 3094773
Query 76966 AAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATG 77025
|||||| ||||| || | | || | ||| ||| | || ||| |||||
Sbjct 3094772 AAAACATGAAGACAACTGTGGTCTAGGGGTGGCAGCAGCAAAAAGAGTTGGACTCGCATG 3094713
Query 77026 AGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTG 77085
|||||| |||| ||||| | || ||||||||| | ||| | || || | |||
Sbjct 3094712 AGTGAAATATTTCTCAGATAATAAATTGTATGTCTGAATGGCGGCATCAACATCTTCACC 3094653
Query 77086 ATGAATTCCTACAGCGACACGCATCAACATATGCTGAGG 77124
||| ||||| | || || | ||| ||||||||||| ||
Sbjct 3094652 ATGTATTCCGATAGAAACTCTCATTAACATATGCTGCGG 3094614
>seq1353
Length=2130601
Score = 95.1 bits (104), Expect = 2e-14
Identities = 97/127 (76%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 169535 TTATGACTCCTATCAATCCTATGTTGGCCGAATCATGCGATTCTGTTAACAAGGCATTTA 169594
||||||||||| | ||||||||||| ||| ||||| | ||||| | | ||| | |
Sbjct 1736940 TTATGACTCCTGTGCGGCCTATGTTGGCTGAAGCATGCAAATCTGTAGAAATGGCTATGA 1736881
Query 169595 AAAAATTTCCATCTGGGATGTTTGCAGAAGTCAAATATGACGGTGAACGAGTGCAAGTTC 169654
|||||| ||| || |||| | | ||| ||||||||||||| ||| |||| ||||| |
Sbjct 1736880 AAAAATGTCCCAACGGTATGTATTCTGAAATCAAATATGACGGAGAAAGAGTACAAGTGC 1736821
Query 169655 ATAAAAA 169661
|||||||
Sbjct 1736820 ATAAAAA 1736814
>seq1346
Length=947742
Score = 95.1 bits (104), Expect = 2e-14
Identities = 158/226 (70%), Gaps = 3/226 (1%)
Strand=Plus/Plus
Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713
||||||||| ||| | ||| || || || ||||||||||| || || | ||| ||
Sbjct 445070 TCATCTCTAGAAATCAGTTCATTGCTGAAAGTAAGCCCAGGCATGAGCCCCCTCTTCTTC 445129
Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773
||||| || || | |||||| || || ||||| |||||||| || || || || ||
Sbjct 445130 AGCCAGAAGATGGAAGCGAAACTGCCCGAGAAGAAGATGCCTTCGACTGCTGCAAAAGCC 445189
Query 46774 ACAAGTCTCTCTCCGTAACTGGCA-TCATTATG--AATCCACCTTTGAGCCCAATCAGCC 46830
|||| || ||||| | ||||| || | || |||||| ||||| || |||
Sbjct 445190 ACAATTCGTTCTCCAAATGTGGCAGTCTTGCTGGCGATCCACTGCAATGCCCAGTCGGCC 445249
Query 46831 TTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGT 46876
|| ||||| || || |||| || || || ||||| || || ||||
Sbjct 445250 TTCTTCTTCACGCAGGGCAGGGTCTCAATGGCATTGAACAGGAAGT 445295
Score = 89.7 bits (98), Expect = 7e-13
Identities = 112/154 (73%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 46921 TACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCA 46980
||||| || ||||| | ||||| ||||| ||||| || || |||||| |||| |||||
Sbjct 446283 TACATCTCAGAATGTACATTTTCCATAGCAATCTGGAACCCATAAAAAAATCTAGCTTCT 446342
Query 46981 GTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTA 47040
|| | || |||||| | |||| ||| | || ||||| |||||||||||
Sbjct 446343 GTCACTTGGACCTCTTGTGAGAATCTTTCTACTAGGTTTTCATTGACTATTCCATCTGAC 446402
Query 47041 GCAGCAAAAAATGCCAATACATGTTTAATAAAAT 47074
|| || |||||||| | |||||||| || ||||
Sbjct 446403 GCTGCGAAAAATGCAAGCACATGTTTGATGAAAT 446436
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712869335824320
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