Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1207 149 1e-30 seq1196 132 1e-25 >seq1207 Length=6027761 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || ||||| ||||||||||| || ||||||||||| || | || || | |||||| Sbjct 3527767 AGAACTAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCT 3527826 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | || || || ||||| | | ||||||||| | | ||||| || || || Sbjct 3527827 TCCAATTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATTCCCTCTTTGTCC 3527886 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||||||| ||||||| |||| | | |||||||| ||| |||||||| || || ||| Sbjct 3527887 TGAATTTTTGCTTTGACATTCTCAATGGTGTCTGAAGGCTCCACTTCAAGTGTGATGGTT 3527946 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || |||||||| || ||||||| |||||| Sbjct 3527947 TTCCCAGTGAGAGTTTTTACGAAGATCTGCAT 3527978 Score = 127 bits (140), Expect = 5e-24 Identities = 156/210 (74%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || || || ||||||||||| || || | | ||| | |||||||| | Sbjct 3526176 CAAG-TGAAGGGTTGATTCCTTTTGGATGTTATAGTCTGAGAGAGTGCGACCATCTTCCA 3526234 Query 151957 --GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 ||||| ||||| ||||| | | ||||||||| | | ||||| || || || || Sbjct 3526235 ACTGCTTT--CCGGCAAAGATCAAACGCTGCTGGTCTGGGGGAATTCCCTCTTTATCCTG 3526292 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 ||| || ||||||| |||| | | |||| ||| ||| |||||||| || |||||||| Sbjct 3526293 AATCTTAGCTTTGACATTCTCAATGGTGTCAGAAGGCTCAACTTCAAGTGTGATAGTTTT 3526352 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || ||||||| |||||| Sbjct 3526353 CCCAGTAAGAGTTTTAACGAAGATCTGCAT 3526382 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| ||||| ||||||||||| || ||||||||||| || | || || | |||||| Sbjct 3526399 AGGACTAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCT 3526458 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | || || || ||||| | | ||| ||||| | | ||| |||||||| ||| Sbjct 3526459 TCCAATTGCTTGCCAGCAAAGATCAAACGCTGTTGGTCTGGGGGGATGCCTTCCTTGTCT 3526518 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || ||||| ||||||| |||| | |||| ||| || |||||||| || || || Sbjct 3526519 TGGATTTTAGCTTTGACATTCTCAATTGTGTCAGAAGGTTCCACTTCAAGGGTGATGGTC 3526578 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| || || | |||||| Sbjct 3526579 TTTCCAGTGAGGGTCTTAACAAAAATCTGCAT 3526610 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| ||||| ||||||||||| || ||||||||||| || | || || | |||||| Sbjct 3527539 AGGACTAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCT 3527598 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | || || || ||||| | | ||| ||||| | | ||| |||||||| ||| Sbjct 3527599 TCCAATTGCTTGCCAGCAAAGATCAAACGCTGTTGGTCTGGGGGGATGCCTTCCTTGTCT 3527658 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || ||||| ||||||| |||| | |||| ||| || |||||||| || || || Sbjct 3527659 TGGATTTTAGCTTTGACATTCTCAATTGTGTCAGAAGGTTCCACTTCAAGGGTGATGGTC 3527718 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| || || | |||||| Sbjct 3527719 TTTCCAGTGAGGGTCTTAACAAAAATCTGCAT 3527750 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| ||||| ||||||||||| || |||||||| || || | || || | |||||| Sbjct 3525943 AGGACTAGATGGAGAGTAGACTCCTTCTGGATGTTATAGTCAGACAAGGTGCGGCCATCT 3526002 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | || || || ||||| | | ||||||||| | | ||||| || || || Sbjct 3526003 TCCAATTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATTCCCTCTTTGTCC 3526062 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 |||||||| ||||||| | |||| |||| || |||||||| || || || ||| Sbjct 3526063 TGAATTTTAGCTTTGACATTTTCTATTGTGTCAGATGGTTCTACTTCTAGTGTGATGGTT 3526122 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || |||||||| || ||||| | |||||| Sbjct 3526123 TTTCCAGTGAGAGTTTTGACGAATATCTGCAT 3526154 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || ||||| ||||||||||| || ||||||||||| || | || || | |||||| Sbjct 3526627 AGAACTAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCT 3526686 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | || || || ||||| | | ||| ||||| | | ||| |||||||| ||| Sbjct 3526687 TCCAATTGCTTGCCAGCAAAGATCAAACGCTGTTGGTCTGGGGGGATGCCTTCCTTGTCT 3526746 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || ||||| ||||||| |||| | |||| ||| || |||||||| || || || Sbjct 3526747 TGGATTTTAGCTTTGACATTCTCAATTGTGTCAGAAGGTTCCACTTCAAGGGTGATGGTC 3526806 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| || || | |||||| Sbjct 3526807 TTTCCAGTGAGGGTCTTAACAAAAATCTGCAT 3526838 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || ||||| ||||||||||| || ||||||||||| || | || || | |||||| Sbjct 3526855 AGAACTAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCT 3526914 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | || || || ||||| | | ||| ||||| | | ||| |||||||| ||| Sbjct 3526915 TCCAATTGCTTGCCAGCAAAGATCAAACGCTGTTGGTCTGGGGGGATGCCTTCCTTGTCT 3526974 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || ||||| ||||||| |||| | |||| ||| || |||||||| || || || Sbjct 3526975 TGGATTTTAGCTTTGACATTCTCAATTGTGTCAGAAGGTTCCACTTCAAGGGTGATGGTC 3527034 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| || || | |||||| Sbjct 3527035 TTTCCAGTGAGGGTCTTAACAAAAATCTGCAT 3527066 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || ||||| ||||||||||| || ||||||||||| || | || || | |||||| Sbjct 3527083 AGAACTAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCT 3527142 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | || || || ||||| | | ||||||||| | | ||||| || || || Sbjct 3527143 TCCAATTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATTCCCTCTTTGTCC 3527202 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 |||||||| ||| ||| | |||| |||| || |||||||| || || || ||| Sbjct 3527203 TGAATTTTAGCTTTAACATTTTCTATTGTGTCAGATGGTTCTACTTCTAGTGTGATGGTT 3527262 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || |||||||| || ||||| | |||||| Sbjct 3527263 TTTCCAGTGAGAGTTTTGACGAATATCTGCAT 3527294 Score = 105 bits (116), Expect = 2e-17 Identities = 149/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| || ||||| || |||||||||| | || | |||||||| | Sbjct 2996251 CAAG-TGAAGAGTAGATTCCTTTTGAATATTGTAATCGGAAAGCGTGCGTCCATCTTCCA 2996309 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || |||||||| | | ||||||||| | | || |||||||| ||||||| Sbjct 2996310 ACTGCTTGCCTGCGAAGATCAATCGCTGCTGGTCTGGAGGAATGCCTTCCTTGTCTTGAA 2996369 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| || ||| | || | ||||||| ||||||||| | || || ||||| | Sbjct 2996370 TTTTAGCCTTAACATTTTCGATAGTGTCTGATGGCTCTACTTCTAAGGTGATGGTTTTTC 2996429 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | ||||| ||||| | ||||| Sbjct 2996430 CGGTCAATGTCTTGACGAAAATTTGCAT 2996457 Score = 102 bits (112), Expect = 2e-16 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| ||||||||||| ||||| |||||||| |||| | || | || ||||| | Sbjct 2997820 ATGTAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAAAGCGTGCGTCCGTCTTCCAACTG 2997879 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 || || |||||||| | | ||||||||| | | || |||||||| ||||||||||| Sbjct 2997880 CTTGCCTGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGAATTTT 2997939 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 || ||| | || | ||||||| ||||||||| | || || ||||| || || Sbjct 2997940 AGCCTTAACATTTTCGATAGTGTCTGATGGCTCTACTTCTAAGGTGATGGTTTTTCCGGT 2997999 Query 152081 GAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| ||||| | ||||| Sbjct 2998000 CAATGTCTTGACGAAAATTTGCAT 2998023 Score = 98.7 bits (108), Expect = 2e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 || || |||||||| ||||||||||| | | || | || ||||| | ||| || Sbjct 3525274 GTGGATTCTTTTTGTATGTTGTAATCAGAGAGGGTGCGTCCGTCTTCCAATTGTTTACCA 3525333 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 |||||||| || | ||| ||||| | | ||| || ||||| || |||||||| ||| Sbjct 3525334 GCGAAGATCAGACGCTGTTGGTCTGGAGGGATACCCTCCTTGTCCTGAATTTTGGCTTTA 3525393 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 ||| | || | |||| || ||| ||||| | ||| |||||||| || || | ||| Sbjct 3525394 ACATTTTCAATTGTGTCAGATGGCTCAACTTCTAAAGTTATAGTTTTACCAGTTAAAGTT 3525453 Query 152088 TTCACGAAGACCTGCAT 152104 ||||| || | |||||| Sbjct 3525454 TTCACAAATATCTGCAT 3525470 Score = 93.3 bits (102), Expect = 1e-13 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || || |||||||| | | ||||||||| | | || |||||||| ||||||||||| Sbjct 2997653 TTGCCTGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGAATTTTA 2997712 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 || || | || | ||||||| ||||||||| | |||||||||||| ||||| Sbjct 2997713 GCCTTCACGTTTTCAATAGTGTCTGATGGCTCTACTTCTAAAGTAATAGTTTTTCCCGTC 2997772 Query 152082 AGAGTCTTCACGAAGACCTGCATT 152105 | ||||||||||| | |||||| Sbjct 2997773 AATGTCTTCACGAAAATTTGCATT 2997796 >seq1196 Length=1288689 Score = 132 bits (146), Expect = 1e-25 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 || ||||| ||||| || ||||| || | || || | |||||||| || ||| || Sbjct 730206 GTGGACTCCTTTTGAATATTGTAGTCTGACAATGTGCGGCCATCTTCCAGTTGTTTGCCA 730265 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 ||||||||||| | ||||||||||| | ||| |||||||| ||||||||||| ||| Sbjct 730266 GCGAAGATAAGTCGCTGCTGGTCCGGAGGGATACCTTCCTTATCTTGAATTTTGGCTTTC 730325 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 ||| | || | | |||| ||| || || ||||| || || || || ||||| || || Sbjct 730326 ACATTTTCGATGGTGTCAGAAGCTTCCACCTCAAGGGTGATGGTCTTCCCCGTAAGTGTT 730385 Query 152088 TTCACGAAGACCTGCATT 152105 || ||||||| ||||||| Sbjct 730386 TTTACGAAGATCTGCATT 730403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153712866914971