Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_031761.1
Length=131855
Score E
Sequences producing significant alignments: (Bits) Value
seq1168 125 6e-24
seq1207 113 4e-20
seq1889 95.1 1e-14
seq3248 91.5 1e-13
seq1459 91.5 1e-13
>seq1168
Length=7897672
Score = 125 bits (138), Expect = 6e-24
Identities = 135/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 105056 CAAAGGCCAGAGCAATTGGCCGAAGCCGGTTTTTACTACACCGGCAAAGGTGATAAAGTC 105115
|||| ||| || | || || |||||||||||||| ||||||||| |||| || ||
Sbjct 2386385 CAAAAGCCGGAAGATTTAGCTGAAGCCGGTTTTTATTACACCGGCCAAGGCGACAAGACT 2386444
Query 105116 AAATGTTTTTATTGCGACGGCGGCCTTAAGGATTGGGCAAACGCCGACGAACCGTGGGAG 105175
|| |||| || || ||||| ||||| || ||||||| ||| | ||| | ||||||||||
Sbjct 2386445 AAGTGTTACTACTGTGACGGAGGCCTGAAAGATTGGGAAAAAGACGATGTACCGTGGGAG 2386504
Query 105176 GAACATGCACGTTGGTTTGATCGCTGTTCGTTCGTAAAACTGGTCAAAGGACACGACTA 105234
| || || ||||||||||| || |||| | ||| | || || ||||||| ||| ||
Sbjct 2386505 CAGCACGCTCGTTGGTTTGACCGTTGTTATTATGTATACCTTGTTAAAGGACGCGATTA 2386563
Score = 91.5 bits (100), Expect = 1e-13
Identities = 133/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 104684 ACATACGTTAACTGGCCCGTGTCATTTTTGGAACCAAGTCAAATGGCCGCCAACGGGTTC 104743
|||| ||| || ||||| || ||||| | |||| || | || |||||| ||
Sbjct 2386025 ACATTCGTCAATTGGCCTGTCCCATTTCTATCACCACTAAAACTAGCTCGCAACGGTTTT 2386084
Query 104744 TACTATTTGGGGCGCGCGGACGAAGTGCGCTGCGCGTTCTGCAAAGTGGAAATAATGCGC 104803
|| |||||||| |||||||| | || || || || |||||||| || ||| |
Sbjct 2386085 TATTATTTGGGAAAAAATGACGAAGTTAGGTGTGCTTTTTGTAAAGTGGAGATTATGAGG 2386144
Query 104804 TGGTTGGAGGGCGACGACCCGGCCGTAGATCATAAACGATGGGCGCCACAGTGCCCGTTT 104863
||| |||| |||||||| || ||| ||| ||| | || ||||||||||| |||||| |
Sbjct 2386145 TGGATGGAAGGCGACGATCCAGCCAAAGACCATCAGCGGTGGGCGCCACAATGCCCGCTA 2386204
Query 104864 TTGCGAAA 104871
|| || ||
Sbjct 2386205 TTACGCAA 2386212
>seq1207
Length=6027761
Score = 113 bits (124), Expect = 4e-20
Identities = 164/232 (71%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 111097 AAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111156
|||||||| ||||| || || || ||||| || ||||||||||| ||||| ||||||
Sbjct 3528209 AAAATGCAGATTTTCGTTAAGACCTTGACTGGTAAAACCATTACATTGGAAGTTGAACCC 3528150
Query 111157 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111216
||| | | | | |||||| ||||| |||||||||||| |||| |||
Sbjct 3528149 TCTGATACAATCGAAAACGTAAAAGCCAAAATCCAAGACAAAGAAGGCATTCCGCCTGAT 3528090
Query 111217 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 111276
|| || | || || | || || ||||| |||||||| | || | |||| ||
Sbjct 3528089 CAGCAGCGCCTGATCTTCGCTGGAAAACAGTTGGAAGACGGTCGCACCCTCTCCGACTAC 3528030
Query 111277 AATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328
||||| ||||| ||||| || || || || ||| ||||||| || |||||||
Sbjct 3528029 AATATTCAAAAGGAATCAACCCTTCACTTGGTGCTGCGTCTCCGTGGTGGCA 3527978
Score = 95.1 bits (104), Expect = 1e-14
Identities = 162/233 (70%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 111096 AAAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACC 111155
||||||||| || ||||| || || ||||| || || || |||||| ||||| || ||
Sbjct 2996689 AAAAATGCAGATCTTTGTGAAGACATTGACGGGTAAGACTATTACCTTGGAAGTAGAGCC 2996630
Query 111156 CAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGA 111215
||| || ||| | || ||| || ||| || ||||| || | || ||
Sbjct 2996629 TTCTGATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAGGGAATCCCTCCTGA 2996570
Query 111216 TCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATT--CTAAAACTATGGCCGAT 111273
||| || | || || | || ||||| || |||||||| | | ||||| |||||
Sbjct 2996569 TCAGCAGCGACTGATCTTCGCAGGCAAGCAGTTGGAAGACGGACGCACACTAT--CCGAT 2996512
Query 111274 TATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
|| ||||| || ||||||||||| || ||||| || ||||| || || |||||
Sbjct 2996511 TACAATATTCAGAAAGAATCTACCCTTCATTTGGTATTGCGCCTCCGTGGTGG 2996459
Score = 95.1 bits (104), Expect = 1e-14
Identities = 162/233 (70%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 111096 AAAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACC 111155
||||||||| || ||||| || || ||||| || || || |||||| ||||| || ||
Sbjct 2998255 AAAAATGCAGATCTTTGTGAAGACATTGACGGGTAAGACTATTACCTTGGAAGTAGAGCC 2998196
Query 111156 CAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGA 111215
||| || ||| | || ||| || ||| || ||||| || | || ||
Sbjct 2998195 TTCTGATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAGGGAATCCCTCCTGA 2998136
Query 111216 TCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATT--CTAAAACTATGGCCGAT 111273
||| || | || || | || ||||| || |||||||| | | ||||| |||||
Sbjct 2998135 TCAGCAGCGACTGATCTTCGCAGGCAAGCAGTTGGAAGACGGACGCACACTAT--CCGAT 2998078
Query 111274 TATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
|| ||||| || ||||||||||| || ||||| || ||||| || || |||||
Sbjct 2998077 TACAATATTCAGAAAGAATCTACCCTTCATTTGGTATTGCGCCTCCGTGGTGG 2998025
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
||||||||||| ||||| || |||||||| |||||||| ||| | ||| || ||
Sbjct 2996457 ATGCAAATTTTCGTCAAGACATTGACCGGAAAAACCATCACCTTAGAAGTAGAGCCATCA 2996398
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
|| || | | | || || |||||| ||||| |||||| |||| || ||
Sbjct 2996397 GACACTATCGAAAATGTTAAGGCTAAAATTCAAGACAAGGAAGGCATTCCTCCAGACCAG 2996338
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
|| | | || | || ||||| || ||||||||| || | ||||||| |||
Sbjct 2996337 CAGCGATTGATCTTCGCAGGCAAGCAGTTGGAAGATGGACGCACGCTTTCCGATTACAAT 2996278
Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
|| ||||| |||||||| || || || || ||||||| || |||||
Sbjct 2996277 ATTCAAAAGGAATCTACTCTTCACTTGGTACTGCGTCTTCGTGGTGG 2996231
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159
||||||||||| ||||| || |||||||| |||||||| ||| | ||| || ||
Sbjct 2998023 ATGCAAATTTTCGTCAAGACATTGACCGGAAAAACCATCACCTTAGAAGTAGAGCCATCA 2997964
Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219
|| || | | | || || |||||| ||||| |||||| ||||| || ||
Sbjct 2997963 GACACTATCGAAAATGTTAAGGCTAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCAG 2997904
Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279
|| | | || | || ||||| || |||||||| || | |||| || ||
Sbjct 2997903 CAGCGATTGATCTTCGCAGGCAAGCAGTTGGAAGACGGACGCACGCTTTCCGACTACAAC 2997844
Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
|| ||||| || ||||| ||||||||||| || ||| || | |||||
Sbjct 2997843 ATTCAAAAGGAGTCTACTCTACATTTAGTATTACGTTTGAGAGGTGG 2997797
>seq1889
Length=140810
Score = 95.1 bits (104), Expect = 1e-14
Identities = 162/233 (70%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 111096 AAAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACC 111155
||||||||| || ||||| || || ||||| || || || |||||| ||||| || ||
Sbjct 27459 AAAAATGCAGATCTTTGTGAAGACATTGACGGGTAAGACTATTACCTTGGAAGTAGAGCC 27518
Query 111156 CAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGA 111215
||| || ||| | || ||| || ||| || ||||| || | || ||
Sbjct 27519 TTCTGATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAGGGAATCCCTCCTGA 27578
Query 111216 TCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATT--CTAAAACTATGGCCGAT 111273
||| || | || || | || ||||| || |||||||| | | ||||| |||||
Sbjct 27579 TCAGCAGCGACTGATCTTCGCAGGCAAGCAGTTGGAAGACGGACGCACACTAT--CCGAT 27636
Query 111274 TATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326
|| ||||| || ||||||||||| || ||||| || ||||| || || |||||
Sbjct 27637 TACAATATTCAGAAAGAATCTACCCTTCATTTGGTATTGCGCCTCCGTGGTGG 27689
>seq3248
Length=8693
Score = 91.5 bits (100), Expect = 1e-13
Identities = 73/88 (83%), Gaps = 0/88 (0%)
Strand=Plus/Minus
Query 95409 CTGCGCTTGCAACTCAATTTGCGGGTTCCAATGCGGTTCCAACATGATAATGTGGTTGCC 95468
|||||||||| ||| | ||||||||||| ||||| ||||||| || | ||||||| |
Sbjct 8686 CTGCGCTTGCTCCTCCAGCTGCGGGTTCCAGTGCGGGTCCAACAGGAGCAGGTGGTTGGC 8627
Query 95469 GCCGGTTAAATTCAGACCTACGCCGCCG 95496
|||| |||||| |||||||||||||||
Sbjct 8626 GCCGCATAAATTGAGACCTACGCCGCCG 8599
>seq1459
Length=1092699
Score = 91.5 bits (100), Expect = 1e-13
Identities = 92/120 (77%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 95377 TGCTTCTTTTGACCCATGCGATGAATGCGGCTCTGCGCTTGCAACTCAATTTGCGGGTTC 95436
|| ||||| || |||| ||| | || | |||||||||| ||| | |||||||||
Sbjct 75859 TGTTTCTTCTGCCCCACGCGGTATATTCTATCCTGCGCTTGCTCCTCCAGCTGCGGGTTC 75800
Query 95437 CAATGCGGTTCCAACATGATAATGTGGTTGCCGCCGGTTAAATTCAGACCTACGCCGCCG 95496
|| ||||| ||||| | || | ||||||| ||||| |||||| |||||||||||||||
Sbjct 75799 CAGTGCGGGTCCAAAAGGAGCAGGTGGTTGGCGCCGCATAAATTGAGACCTACGCCGCCG 75740
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421773666843976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |