Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22] 7,301 sequences; 406,468,287 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1207 159 8e-34 seq1196 145 2e-29 seq1889 116 9e-21 >seq1207 Length=6027761 Score = 159 bits (176), Expect = 8e-34 Identities = 159/205 (78%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| |||||||| || || ||||| ||||| || || || || || ||| Sbjct 3526379 CAGATCTTCGTTAAAACTCTTACTGGGAAAACTATCACACTTGAAGTTGAGCCTTCTGAC 3526320 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| ||||| |||||| ||||||||||| ||||| ||||| || || |||||||| Sbjct 3526319 ACCATTGAGAATGTCAAAGCTAAGATTCAGGATAAAGAGGGAATTCCCCCAGACCAGCAG 3526260 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| |||||||| ||| | |||||||| | ||||| | || |||||| || Sbjct 3526259 CGTTTGATCTTTGCCGGAAAGCAGTTGGAAGATGGTCGCACTCTCTCAGACTATAACATC 3526200 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| |||||||| || || |||| Sbjct 3526199 CAAAAGGAATCAACCCTTCA-CTTG 3526176 Score = 154 bits (170), Expect = 4e-32 Identities = 158/205 (77%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || || ||||| |||||||| ||||| || || |||||| || ||| Sbjct 3525923 CAGATTTTTGTTAAGACCCTCACTGGAAAAACCATCACACTTGAAGTGGAACCTTCTGAC 3525864 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||| || ||| || |||||||||||||| ||||| || || |||||||| Sbjct 3525863 ACCATCGAGAATGTTAAAGCTAAAATTCAGGACAAAGAGGGAATTCCCCCAGACCAGCAG 3525804 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || || ||| | |||||||| | ||||| | || ||||| || Sbjct 3525803 CGTTTGATCTTCGCTGGCAAGCAGTTGGAAGATGGCCGCACTCTCTCAGACTATAATATC 3525744 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| || ||||| || || |||| Sbjct 3525743 CAAAAGGAGTCAACCCTTCA-CTTG 3525720 Score = 147 bits (162), Expect = 5e-30 Identities = 159/208 (76%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||||||||| || ||||| ||||| || || ||||| |||||| Sbjct 3527975 CAGATCTTCGTAAAAACTCTCACTGGGAAAACCATCACACTTGAAGTGGAGCCTTCAGAC 3527916 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| ||||| |||||| ||| |||||||||||||| ||||| || || |||||||| Sbjct 3527915 ACCATTGAGAATGTCAAAGCAAAAATTCAGGACAAAGAGGGAATTCCCCCAGACCAGCAG 3527856 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | ||||| || || || || | |||||||| | || |||| | || || ||| | Sbjct 3527855 CGTTTGATCTTTGCTGGCAAGCAATTGGAAGATGGCCGCAC-CTTGTCTGACTACAACAT 3527797 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTT 178130 ||| || || || || || ||||| ||| Sbjct 3527796 CCAGAAGGAGTCTACTCTCCATCTAGTT 3527769 Score = 145 bits (160), Expect = 2e-29 Identities = 156/205 (76%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| |||||||| || || ||||| ||||| || || || || || ||| Sbjct 3527519 CAGATCTTCGTTAAAACTCTTACTGGGAAAACTATCACACTTGAAGTTGAGCCTTCTGAC 3527460 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || |||||| ||||||||||| ||||| ||||| || || |||||||| Sbjct 3527459 ACCATTGAAAATGTCAAAGCTAAGATTCAGGATAAAGAGGGAATTCCCCCAGACCAGCAG 3527400 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| |||||||| ||| | |||||||| | ||||| | || |||||| || Sbjct 3527399 CGTTTGATCTTTGCCGGAAAGCAGTTGGAAGATGGTCGCACTCTCTCAGACTATAACATC 3527340 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || ||||| || || || |||| Sbjct 3527339 CAGAAGGAATCGACTCTTCA-CTTG 3527316 Score = 141 bits (156), Expect = 2e-28 Identities = 155/205 (76%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || | || |||||||| |||||| | || || || |||||| Sbjct 2996454 CAAATTTTCGTCAAGACATTGACCGGAAAAACCATCACCTTAGAAGTAGAGCCATCAGAC 2996395 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || || ||||| ||||| ||||| || ||||| |||||||| Sbjct 2996394 ACTATCGAAAATGTTAAGGCTAAAATTCAAGACAAGGAAGGCATTCCTCCAGACCAGCAG 2996335 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | |||||||| || || ||| | ||||||||| | || ||| ||||||| || | Sbjct 2996334 CGATTGATCTTCGCAGGCAAGCAGTTGGAAGATGGACGCACGCTTTCCGATTACAATATT 2996275 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| ||||| || || || |||| Sbjct 2996274 CAAAAGGAATCTACTCTTCA-CTTG 2996251 Score = 136 bits (150), Expect = 1e-26 Identities = 156/207 (75%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||||||||| |||||||| ||||| || || || ||| || ||| Sbjct 3526151 CAGATATTCGTCAAAACTCTCACTGGAAAAACCATCACACTAGAAGTAGAACCATCTGAC 3526092 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || |||||| || |||||||||||||| ||||| || || |||||||| Sbjct 3526091 ACAATAGAAAATGTCAAAGCTAAAATTCAGGACAAAGAGGGAATTCCCCCAGACCAGCAG 3526032 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | ||||| || || || || | |||||||| | || |||| | || |||||| | Sbjct 3526031 CGTTTGATCTTTGCTGGCAAGCAATTGGAAGATGGCCGCAC-CTTGTCTGACTATAACAT 3525973 Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129 ||| || || || || || ||||| || Sbjct 3525972 CCAGAAGGAGTCTACTCTCCATCTAGT 3525946 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || | || |||||||| |||||| | || || || |||||| Sbjct 2998020 CAAATTTTCGTCAAGACATTGACCGGAAAAACCATCACCTTAGAAGTAGAGCCATCAGAC 2997961 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || || ||||| ||||| ||||| || || || |||||||| Sbjct 2997960 ACTATCGAAAATGTTAAGGCTAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCAGCAG 2997901 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | |||||||| || || ||| | ||||| ||| | || ||| |||| || ||| | Sbjct 2997900 CGATTGATCTTCGCAGGCAAGCAGTTGGAAGACGGACGCACGCTTTCCGACTACAACATT 2997841 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132 ||||| || || || || ||| | || || Sbjct 2997840 CAAAAGGAGTCTACTCTACATTTAGTATT 2997812 Score = 129 bits (142), Expect = 1e-24 Identities = 155/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||||||||| |||||||| ||||| || || || ||| || ||| Sbjct 3527291 CAGATATTCGTCAAAACTCTCACTGGAAAAACCATCACACTAGAAGTAGAACCATCTGAC 3527232 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| || |||||||||||||| ||||| || || |||||||| Sbjct 3527231 ACAATAGAAAATGTTAAAGCTAAAATTCAGGACAAAGAGGGAATTCCCCCAGACCAGCAG 3527172 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | ||||| || || || || | |||||||| | || |||| | || || ||| | Sbjct 3527171 CGTTTGATCTTTGCTGGCAAGCAATTGGAAGATGGCCGCAC-CTTGTCTGACTACAACAT 3527113 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTT 178130 ||| || || || || || ||||| ||| Sbjct 3527112 CCAGAAGGAGTCTACTCTCCATCTAGTT 3527085 Score = 120 bits (132), Expect = 7e-22 Identities = 156/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | |||||||| || || | || || ||||| || || | || || ||| Sbjct 3528209 AAAATGC---AGATTTTCGTTAAGACCTTGACTGGTAAAACCATTACATTGGAAGTTGAA 3528153 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 ||| || || ||||| ||||| ||| || || || ||||||||||| || || || Sbjct 3528152 CCCTCTGATACAATCGAAAACGTAAAAGCCAAAATCCAAGACAAAGAAGGCATTCCGCCT 3528093 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || ||||| || || |||||||| ||||||||| | ||||| || | || || |||| Sbjct 3528092 GATCAGCAGCGCCTGATCTTCGCTGGAAAACAGTTGGAAGACGGTCGCACCCTCTCCGAC 3528033 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128 || || | ||||| |||||||| || || |||| Sbjct 3528032 TACAATATTCAAAAGGAATCAACCCTTCA-CTTG 3528000 Score = 118 bits (130), Expect = 3e-21 Identities = 150/205 (73%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||||||| | || || ||||| || || | || || || || ||| Sbjct 3525467 CAGATATTTGTGAAAACTTTAACTGGTAAAACTATAACTTTAGAAGTTGAGCCATCTGAC 3525408 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| || ||||||||||| || || |||||||| ||||| || Sbjct 3525407 ACAATTGAAAATGTTAAAGCCAAAATTCAGGACAAGGAGGGTATCCCTCCAGACCAACAG 3525348 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || ||||| | ||||| ||| | || || | ||||| ||| | Sbjct 3525347 CGTCTGATCTTCGCTGGTAAACAATTGGAAGACGGACGCACCCTCTCTGATTACAACATA 3525288 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||||||||| || |||| |||| Sbjct 3525287 CAAAAAGAATCCACCTTGCA-CTTG 3525264 Score = 116 bits (128), Expect = 9e-21 Identities = 161/225 (72%), Gaps = 3/225 (1%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | || || ||||| || | || || || || || ||| | || || || Sbjct 2996688 AAAATGC---AGATCTTTGTGAAGACATTGACGGGTAAGACTATTACCTTGGAAGTAGAG 2996632 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || || || || || || || ||| |||||||| || ||||| ||||||||||| Sbjct 2996631 CCTTCTGATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAGGGAATCCCTCCT 2996572 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || ||||| ||||| |||||||| || || ||| | ||||| ||| | || || ||||| Sbjct 2996571 GATCAGCAGCGACTGATCTTCGCAGGCAAGCAGTTGGAAGACGGACGCACACTATCCGAT 2996512 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || | || |||||||| || || ||| | || ||| | ||| Sbjct 2996511 TACAATATTCAGAAAGAATCTACCCTTCATTTGGTATTGCGCCTC 2996467 Score = 116 bits (128), Expect = 9e-21 Identities = 161/225 (72%), Gaps = 3/225 (1%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | || || ||||| || | || || || || || ||| | || || || Sbjct 2998254 AAAATGC---AGATCTTTGTGAAGACATTGACGGGTAAGACTATTACCTTGGAAGTAGAG 2998198 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || || || || || || || ||| |||||||| || ||||| ||||||||||| Sbjct 2998197 CCTTCTGATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAGGGAATCCCTCCT 2998138 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || ||||| ||||| |||||||| || || ||| | ||||| ||| | || || ||||| Sbjct 2998137 GATCAGCAGCGACTGATCTTCGCAGGCAAGCAGTTGGAAGACGGACGCACACTATCCGAT 2998078 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || | || |||||||| || || ||| | || ||| | ||| Sbjct 2998077 TACAATATTCAGAAAGAATCTACCCTTCATTTGGTATTGCGCCTC 2998033 Score = 98.7 bits (108), Expect = 2e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||||||||| || | || |||||||| || || | || || || |||||| Sbjct 2997792 CAAATTTTCGTGAAGACATTGACGGGAAAAACTATTACTTTAGAAGTAGAGCCATCAGAC 2997733 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || ||||| || || ||||| ||||| ||||| || || || |||||||| Sbjct 2997732 ACTATTGAAAACGTGAAGGCTAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCAGCAG 2997673 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGA 178075 ||| | |||||||| || || ||| | ||||| Sbjct 2997672 CGATTGATCTTCGCAGGCAAGCAGTTGGAAGA 2997641 >seq1196 Length=1288689 Score = 145 bits (160), Expect = 2e-29 Identities = 156/205 (76%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||| || || || || || |||||||| ||||||||| || ||| Sbjct 730399 CAGATCTTCGTAAAAACACTTACGGGGAAGACCATCACCCTTGAGGTGGAAGCTTCTGAC 730340 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || ||| || ||||| || || ||||| ||||||||||||||||| Sbjct 730339 ACCATCGAAAATGTGAAAGCCAAAATTCAAGATAAGGAAGGTATCCCTCCGGACCAGCAG 730280 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||||||||||||| || ||||| || |||||||| | || | | || || || | Sbjct 730279 CGACTTATCTTCGCTGGCAAACAACTGGAAGATGGCCGCACATTGTCAGACTACAATATT 730220 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| || || || |||| |||| Sbjct 730219 CAAAAGGAGTCCACCTTGCA-CTTG 730196 >seq1889 Length=140810 Score = 116 bits (128), Expect = 9e-21 Identities = 161/225 (72%), Gaps = 3/225 (1%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | || || ||||| || | || || || || || ||| | || || || Sbjct 27460 AAAATGC---AGATCTTTGTGAAGACATTGACGGGTAAGACTATTACCTTGGAAGTAGAG 27516 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || || || || || || || ||| |||||||| || ||||| ||||||||||| Sbjct 27517 CCTTCTGATACTATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAGGGAATCCCTCCT 27576 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || ||||| ||||| |||||||| || || ||| | ||||| ||| | || || ||||| Sbjct 27577 GATCAGCAGCGACTGATCTTCGCAGGCAAGCAGTTGGAAGACGGACGCACACTATCCGAT 27636 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || | || |||||||| || || ||| | || ||| | ||| Sbjct 27637 TACAATATTCAGAAAGAATCTACCCTTCATTTGGTATTGCGCCTC 27681 Score = 104 bits (114), Expect = 6e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || | || |||||||| |||||| | || || || |||||| Sbjct 27694 CAAATTTTCGTCAAGACATTGACCGGAAAAACCATCACCTTAGAAGTAGAGCCATCAGAC 27753 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || || ||||| ||||| ||||| || || || |||||||| Sbjct 27754 ACTATCGAAAATGTTAAGGCTAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCAGCAG 27813 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGA 178075 ||| | |||||||| || || ||| | ||||| Sbjct 27814 CGATTGATCTTCGCAGGCAAGCAGTTGGAAGA 27845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203618598093394