Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amyelois_20transitella_20[refseq_20GCF_5F001186105.1_202015-07-22]
7,301 sequences; 406,468,287 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq1207 114 1e-20
>seq1207
Length=6027761
Score = 114 bits (126), Expect = 1e-20
Identities = 166/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | ||||| || || || ||||| ||||| || ||||||||
Sbjct 3527979 GCCACCACGGAGACGCAGCACCAAGTGAAGGGTTGATTCCTTTTGAATATTGTAGTCGGA 3528038
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
||||||||| |||| || | ||| || || ||||| ||||||||||| || || | ||
Sbjct 3528039 GAGGGTGCGACCGTCTTCCAACTGTTTTCCAGCGAAGATCAGGCGCTGCTGATCAGGCGG 3528098
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
|| || || ||||| |||||| |||| ||| | | || || | || |
Sbjct 3528099 AATGCCTTCTTTGTCTTGGATTTTG-GCTTTTACGTTTTCGATTGTATCAGAGGGTTCAA 3528157
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
| |||| || || |||||||| |||| ||||| |||||||||||||| ||
Sbjct 3528158 CTTCCAATGTAATGGTTTTACCAGTCAAGGTCTTAACGAAAATCTGCATTTT 3528209
Score = 111 bits (122), Expect = 1e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || | || | ||||| || || || |||||| || || |||||||| ||
Sbjct 3525699 GCCACCACGCAAGCGCAGCACCAAGTGAAGGGTTGACTCCTTTTGGATATTATAGTCTGA 3525758
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
||| ||||| | || || | ||||||||| ||||| |||| ||||| ||||| | |||
Sbjct 3525759 GAGAGTGCGGCCATCTTCCAACTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCTGGGGG 3525818
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
|| | ||| |||||| ||| |||| |||| ||| | | ||||| | ||||
Sbjct 3525819 AATTCCCTCTTTGTCC-TGAATTTTAGCTTTAACATTCTCGATGGTGTCAGAAGGTTCCA 3525877
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
| || | || || ||||| || || || ||||| || ||||||||||||
Sbjct 3525878 CTTCAAGTGTGATGGTTTTTCCAGTGAGGGTCTTAACAAAAATCTGCATG 3525927
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| ||||||| || || || |||||||| ||||||||||| |||
Sbjct 3527296 CCACCACGCAGACGCAACACCAAGTGAAGAGTCGATTCCTTCTGGATGTTATAGTCTGAG 3527355
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || || | |||||| ||||| || |||| ||||| ||||| | ||||
Sbjct 3527356 AGAGTGCGACCATCTTCCAACTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCTGGGGGA 3527415
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | ||| || ||| ||| | || |||| || | | ||||| | ||| ||
Sbjct 3527416 ATTCCCTCTTTATCC-TGAATCTTAGCTTTGACATTTTCAATGGTGTCAGAAGGCTCAAC 3527474
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|| | || || ||||| || || || || || ||||| |||||||||
Sbjct 3527475 TTCAAGTGTGATAGTTTTCCCAGTAAGAGTTTTAACGAAGATCTGCATG 3527523
Score = 100 bits (110), Expect = 3e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| |||| ||| || || || ||||| || || |||
Sbjct 3525244 CCACCACGAAGACGGAGTACCAAGTGCAAGGTGGATTCTTTTTGTATGTTGTAATCAGAG 3525303
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| |||| || | || || || ||||| ||||| ||||||||||| | ||
Sbjct 3525304 AGGGTGCGTCCGTCTTCCAATTGTTTACCAGCGAAGATCAGACGCTGTTGGTCTGGAGGG 3525363
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | |||||||||| ||| |||| |||| ||| | | ||||| | ||| ||
Sbjct 3525364 ATACCCTCCTTGTCC-TGAATTTTGGCTTTAACATTTTCAATTGTGTCAGATGGCTCAAC 3525422
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|| | ||||| |||||||| || | || || || || |||||||||
Sbjct 3525423 TTCTAAAGTTATAGTTTTACCAGTTAAAGTTTTCACAAATATCTGCATG 3525471
Score = 100 bits (110), Expect = 3e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | || ||||| || || ||||||||| ||||||||||| ||
Sbjct 3525927 GCCACCACGAAGACGAAGGACTAGATGGAGAGTAGACTCCTTCTGGATGTTATAGTCAGA 3525986
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
| |||||| | || || | |||||||| || || |||| ||||| ||||| | |||
Sbjct 3525987 CAAGGTGCGGCCATCTTCCAATTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGGGG 3526046
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
|| | ||| |||||| ||| |||| |||| || | | ||||| | || |
Sbjct 3526047 AATTCCCTCTTTGTCC-TGAATTTTAGCTTTGACATTTTCTATTGTGTCAGATGGTTCTA 3526105
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| || | || || ||||| || || || || || ||||| ||||||||
Sbjct 3526106 CTTCTAGTGTGATGGTTTTTCCAGTGAGAGTTTTGACGAATATCTGCAT 3526154
Score = 100 bits (110), Expect = 3e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| ||||||| || || || ||||| || ||||||||||| |||
Sbjct 3526156 CCACCACGCAGACGCAACACCAAGTGAAGGGTTGATTCCTTTTGGATGTTATAGTCTGAG 3526215
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || || | |||||| ||||| || |||| ||||| ||||| | ||||
Sbjct 3526216 AGAGTGCGACCATCTTCCAACTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCTGGGGGA 3526275
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAAC-GACGACACAGTGTCGCTCGACTCCAC 41814
| | ||| || ||| ||| | || |||| || | | ||||| | ||| ||
Sbjct 3526276 ATTCCCTCTTTATCC-TGAATCTTAGCTTTGACATTCTCAATGGTGTCAGAAGGCTCAAC 3526334
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|| | || || ||||| || || || || || ||||| |||||||||
Sbjct 3526335 TTCAAGTGTGATAGTTTTCCCAGTAAGAGTTTTAACGAAGATCTGCATG 3526383
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/206 (71%), Gaps = 2/206 (1%)
Strand=Plus/Plus
Query 41659 ATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTG 41718
||||| ||| || |||||||| |||||||| |||||||| || | || || | ||
Sbjct 3525495 ATGCAATGTGGATTCTTTCTGAATATTATAGTCAGAGAGGGTACGGCCATCTTCCAATTG 3525554
Query 41719 CTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTT 41778
||| || ||||| |||| ||||||||||| | ||| | || |||||||| ||||||
Sbjct 3525555 CTTTCCAGCGAAGATCAAACGCTGTTGGTCTGGGGGGATGCCTTCCTTGTCTTGGATTTT 3525614
Query 41779 TTGCTTCAACGACGACACA-GTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCG 41837
|||| || || ||||| | ||||| || | || || || || ||||
Sbjct 3525615 A-GCTTTGACATTCTCAATTGTGTCAGAAGGTTCCACTTCAAGGGTGATGGTCTTTCCCG 3525673
Query 41838 TCAGCGTCTTTACGAAAATCTGCATG 41863
| || ||||| |||||||||||||||
Sbjct 3525674 TGAGGGTCTTAACGAAAATCTGCATG 3525699
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | || ||||| || || ||||||||| ||||| ||||| ||
Sbjct 3526383 GCCACCACGAAGACGAAGGACTAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGA 3526442
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
| |||||| | || || | |||||||| || || |||| ||||||||||| | |||
Sbjct 3526443 CAAGGTGCGGCCATCTTCCAATTGCTTGCCAGCAAAGATCAAACGCTGTTGGTCTGGGGG 3526502
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACA-GTGTCGCTCGACTCCA 41813
| || |||||||| |||||| |||| || || ||||| | ||||
Sbjct 3526503 GATGCCTTCCTTGTCTTGGATTTTA-GCTTTGACATTCTCAATTGTGTCAGAAGGTTCCA 3526561
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
| || | || || || || || || || ||||| || ||||||||||||
Sbjct 3526562 CTTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTAACAAAAATCTGCATG 3526611
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | || ||||| || || ||||||||| ||||| ||||| ||
Sbjct 3526611 GCCACCACGGAGACGAAGAACTAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGA 3526670
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
| |||||| | || || | |||||||| || || |||| ||||||||||| | |||
Sbjct 3526671 CAAGGTGCGGCCATCTTCCAATTGCTTGCCAGCAAAGATCAAACGCTGTTGGTCTGGGGG 3526730
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACA-GTGTCGCTCGACTCCA 41813
| || |||||||| |||||| |||| || || ||||| | ||||
Sbjct 3526731 GATGCCTTCCTTGTCTTGGATTTTA-GCTTTGACATTCTCAATTGTGTCAGAAGGTTCCA 3526789
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
| || | || || || || || || || ||||| || ||||||||||||
Sbjct 3526790 CTTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTAACAAAAATCTGCATG 3526839
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | || ||||| || || ||||||||| ||||| ||||| ||
Sbjct 3526839 GCCACCACGGAGACGAAGAACTAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGA 3526898
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
| |||||| | || || | |||||||| || || |||| ||||||||||| | |||
Sbjct 3526899 CAAGGTGCGGCCATCTTCCAATTGCTTGCCAGCAAAGATCAAACGCTGTTGGTCTGGGGG 3526958
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACA-GTGTCGCTCGACTCCA 41813
| || |||||||| |||||| |||| || || ||||| | ||||
Sbjct 3526959 GATGCCTTCCTTGTCTTGGATTTTA-GCTTTGACATTCTCAATTGTGTCAGAAGGTTCCA 3527017
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
| || | || || || || || || || ||||| || ||||||||||||
Sbjct 3527018 CTTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTAACAAAAATCTGCATG 3527067
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | || ||||| || || ||||||||| ||||| ||||| ||
Sbjct 3527523 GCCACCACGAAGACGAAGGACTAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGA 3527582
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
| |||||| | || || | |||||||| || || |||| ||||||||||| | |||
Sbjct 3527583 CAAGGTGCGGCCATCTTCCAATTGCTTGCCAGCAAAGATCAAACGCTGTTGGTCTGGGGG 3527642
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACA-GTGTCGCTCGACTCCA 41813
| || |||||||| |||||| |||| || || ||||| | ||||
Sbjct 3527643 GATGCCTTCCTTGTCTTGGATTTTA-GCTTTGACATTCTCAATTGTGTCAGAAGGTTCCA 3527701
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
| || | || || || || || || || ||||| || ||||||||||||
Sbjct 3527702 CTTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTAACAAAAATCTGCATG 3527751
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462261808981200
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