Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq3 107 2e-18 >seq3 Length=33601328 Score = 107 bits (118), Expect = 2e-18 Identities = 193/277 (70%), Gaps = 4/277 (1%) Strand=Plus/Plus Query 118930 TCGAATTTCATGTATCGTATCTTTCCAAATACGGTACGCTCCTTCCATGCTCTG-TCGTG 118988 ||| | |||||||| || ||||| || || | ||||||||||| | ||| || || Sbjct 31445990 TCGTAGTTCATGTAGCGGATCTTGCCGAAAATTTCGCGCTCCTTCCAACC-CTGATCATG 31446048 Query 118989 GAGTCCTGCTACTGCCCATAGACATCCCACGTATCCGTTGGGATCTGTTCCGTCTAACTC 119048 || || || | | ||| | || || ||||| ||||| ||||| ||||| || Sbjct 31446049 GATGCCAGCGATCGACCACATGCAACCAACGTACCCGTTCGGATCGCGCCCGTCCAAGCT 31446108 Query 119049 GTACTTATCGTTTAAGTAGATA-CAGACGCTTAACGCACTTTCCGGAGTCTTACTCCATT 119107 ||| |||||| | ||||||| | | | | | ||| |||||| | ||| |||| | Sbjct 31446109 GTAGCGATCGTTGAGGTAGATAGCGGTCTCG-AGCGCCTCTTCCGGCGATTTAGTCCACT 31446167 Query 119108 CCAGTAtttttttAGCCCAGTACATACGTAAATACCCGTGCATTTTACCCTCGTTAATCA 119167 | || ||||| || ||||||||||| || | | | |||||||| || || || || | || Sbjct 31446168 CGAGGATTTTCTTCGCCCAGTACATGCGCAGAAATCCGTGCATCTTGCCTTCCTTCACCA 31446227 Query 119168 TCTGAAGTTGTGCGGTGTTCCATAGAGGATCGTGTGT 119204 |||| || || || | |||||| || |||||| || Sbjct 31446228 TCTGTAGCTGGGCCGAGTTCCACAGGTCATCGTGGGT 31446264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511413115071320