Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq1 408 5e-109 >seq1 Length=37976048 Score = 408 bits (452), Expect = 5e-109 Identities = 1210/1855 (65%), Gaps = 32/1855 (2%) Strand=Plus/Plus Query 52829 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 52888 || || ||||| |||| ||| ||||| || ||||| || || | |||| ||||| ||| Sbjct 148875 GCCGGCTTCGTGCGTAAATAATACATCCCTGTTTTAAGGCCCATCTTCCAGCCGTAGAAA 148934 Query 52889 TGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 52948 || || ||||||||| || | || || |||| || ||||| | ||| || | Sbjct 148935 TGAATTGATGTTAGTTTACCGTAGTTTGGCTCAGCTACGTGAATATTGAAAGACTGCGAT 148994 Query 52949 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 53008 ||||| || || || || | || || |||||||| ||| || || || |||||| Sbjct 148995 TGATCAATAAATGCCCCTCGATCGGCCGCCATTTTAATGCAAGTTTTCACTGATATTTCC 149054 Query 53009 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTT---TGTATTCTGAATAGA 53064 || | ||||| || | | || || | | || |||| | | |||| || || || Sbjct 149055 CAGACCGTTTTGTACAGATTGCGTA-TGTGTTGCGGAATTTCCTCTATATTTTGTATTGA 149113 Query 53065 TCCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 53124 |||| | ||| ||| | || || || ||||||| ||| | | ||| || | Sbjct 149114 TCCATTGTGGGCCAAGATCTTGTTTTTCATTTCATCATCCCAGAGCTCCAACTCAGTCAG 149173 Query 53125 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 53184 | | | || | ||| |||| || |||||||||||||| || | || || || |||| Sbjct 149174 ATCCTTTAGCAAATGATGATTCACCACTTGAAATTCTCCTGAGAGCACCCTACGGTTGTA 149233 Query 53185 AATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGC 53244 | || || |||||||| | |||||| || || || | ||||| ||||| || || Sbjct 149234 GACGTTTGATGTGTACGGTTCGAAAGACTCGTTGTTGCCGAGGATTTGGGCAGTCGAAGC 149293 Query 53245 AGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTT 53304 || |||||||| || | | | ||| | | |||||| || ||||| | || Sbjct 149294 GGTTGGCATAGGAGCTAGTAGCAGCGAATTACGCAAACCGTACGTAGCAATTTTTTTCTT 149353 Query 53305 TAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAAT 53364 || |||||||||| | || | || ||| ||||| Sbjct 149354 AAGTTCAGCCCAATTCCACAATTCTGTGGGCTTCCTGTCCCACATATCGTATTGAAGAAT 149413 Query 53365 ACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTC 53424 || | || | ||| ||||||| |||||||| || || | |||| | || Sbjct 149414 TCCTCTGCTAACCGGGCTTCCATCATATGTTTCGTATGGACCATCAAGCGCAGCCAACTC 149473 Query 53425 ACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTG 53484 || || || || | ||| ||| ||||||||||||| || || | | ||||| || Sbjct 149474 GCAGCTTGCTTCAAGTGCCCCGAAATAAATGGTTTCAAACATTTGTTGATTTAACAACTG 149533 Query 53485 TGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAAC 53544 ||||| || ||| | |||| | | || || || ||||| | ||||| || Sbjct 149534 GGCTTCTTCACTTTCATAAGGATGGCGCATCAAGATGAAAGCATCTGCCATGCCTTGCAC 149593 Query 53545 ACCAATACCGATAGGTCTATGTCTCTTATTAGA--GATTTCAGCTTCTGGAATAGGATAA 53602 || ||||| || || | || | | ||||||| | ||| ||||| || | |||||| Sbjct 149594 TCCGATACCTATCGGACGGTGGCGCATATTAGATCGCTTT--GCTTCCGGGACAGGATAG 149651 Query 53603 TAATTAATATCTATAATTTTATTGAGGTTTC---TGACAATTACTTTGACCACATCCTTC 53659 || || ||||| || ||||| || || || | | ||| || ||| | || ||||| Sbjct 149652 TAGTTGATATCGATGATTTTGTTCAGATTCCGAGTAACAGTT---TTGGCTACCTCCTTT 149708 Query 53660 AGTTTGAGAAAATCAAATTGTCCATC---TATTACAAACATGTTCAATGCAATAGATGCC 53716 || || ||||| || | ||| | ||||||||||||| | || || || ||| Sbjct 149709 AGCTTCGCGAAATCGTATGTACGATCGGGTTTTACAAACATGTTTAGAGCGATCGAGGCC 149768 Query 53717 AGATTACAAACGGCTACCTCATTAGCATCCGCA---TATTGTATTATCTCAGTGCAAAGA 53773 |||||||| || || | |||| | | | | |||| | || || ||||| || Sbjct 149769 AGATTACACACAGCAATTTCAT---CTTTTGAAGAGTATTCCACAATTTCGGTGCACAGG 149825 Query 53774 TTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTA 53833 || ||||||||| ||||| | |||||||| ||||||||| || |||||||| || Sbjct 149826 TTTGAACACTTGATCGTTCCAACGTTTTGTTGGTTACTCTTTCGATTGCACGCATCTTTG 149885 Query 53834 TAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACA 53893 || || ||| | ||| ||||| |||| ||| || ||||| || || ||| | | Sbjct 149886 TAGAGCATGTAAGGCACTCCAGTCTCAACCTGCGACTCTATGATGGCGAACCACAAATCT 149945 Query 53894 CGAGCCTTTAT-TATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTC 53952 | ||||| | | | | | | | | || | ||||| || || | | || Sbjct 149946 TGCGCCTTAACCTGTCGCGT-GAAACGACCCTCGCGCTCGTAGCCAGTGTAGAGTTTTTG 150004 Query 53953 AAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCA 54012 ||||| || ||||| | ||| |||||||| || | || ||||| || ||| Sbjct 150005 GAACTCCTCACCCCATGTCTCCGACAAACCAGGACAATCGTGGGGGCACATTAAACTCCA 150064 Query 54013 CTCTCCGTCATCCTTC-ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATA 54071 | | ||| | |||| || || | ||| || | |||||||||||| ||||| || | Sbjct 150065 CATTTCGTT-TGCTTCGACACGCTGCATGAACAAATCAGGAATCCACAGAGCGTAGAACA 150123 Query 54072 GATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAA 54131 ||||| | | || || ||||| || ||||||||||| || | ||| | | | Sbjct 150124 TGTCTCTAGCGCGGACCTCTTCTTTTCCCGTGTTCTTTTTAAGGTCCAAAAACTCAAATA 150183 Query 54132 TATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCT 54191 |||| |||||| || ||||| || || | | | ||||| || ||||| || |||| Sbjct 150184 TATCCCCATGCCATGGCTCCAAATAAATAGCAAATGCCCCAGGTCGCTTGTTACCACCCT 150243 Query 54192 GATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATG 54251 | || | ||| | || || || || || || | || ||| || | | || |||||| Sbjct 150244 GGTCCACGTAACGCGCTGTATTGTTGTAGACACGCAGCATAGGTACTAACCCGTTGGATA 150303 Query 54252 CACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTA--CTAATTGATAGACC 54309 |||||| || || | ||||| |||| | || | |||| | | ||| | |||| Sbjct 150304 TACCATTCGTTCCTGCTATATATGTTCCTTTAGCTCTAATACAATGCACATTAA--GACC 150361 Query 54310 TATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 54369 ||| || || ||| ||||||||| ||||| || |||| | ||||| || || ||||| Sbjct 150362 TATGCCACCGGCCGATTTAGAGATCAATGCACACTGTTTGAGAGTATCGTAAATTCCCTC 150421 Query 54370 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 54429 || ||||| ||| ||| | || || || ||| |||| ||| | || |||| | Sbjct 150422 GATGCTATCGTCCGACATTGTCAGCAGGAAGCAGGACGACAGTTGTGGTCGTTGAGTTGC 150481 Query 54430 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 54489 ||| ||| | ||| || || ||||||||||| || ||||| || | |||||||| Sbjct 150482 TGCAGCAAACATGGTTGGCGAGGCGTGCGTAAAGTATCGCTCAGACAGCAAGTTGTACGT 150541 Query 54490 CTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTG 54549 ||| || || | || || || ||| || || | || |||||||| | |||||| Sbjct 150542 CTCAATTGCAGCATCAATGTCTGCACCATGTATGCCGATAGCAACACGCATGAGCATGTG 150601 Query 54550 CTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTT 54609 || || | ||| || ||||| || ||||||| || ||| ||| |||| || ||||| Sbjct 150602 TTGTGGCCGTTCTACAATCTTCCCTTTAATTTTCAACAGGTATGATCTTTCTAATGTTTT 150661 Query 54610 AAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGT 54664 ||||| ||||| ||||| |||||| || ||||| || || | || || ||| Sbjct 150662 GAAACCGAAATAATTGTAACCAAAGTCACGGTCGTAGATGATTGCAGAATTAAGT 150716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593720108274480