Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq3 104 3e-17
seq2 104 3e-17
seq4 96.9 4e-15
>seq3
Length=33601328
Score = 104 bits (114), Expect = 3e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 60061 ATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 60120
||||||||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||
Sbjct 10193309 ATTTTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGAC 10193250
Query 60121 CACTATACTACCGAGGA 60137
|||||||||| ||||||
Sbjct 10193249 CACTATACTATCGAGGA 10193233
Score = 100 bits (110), Expect = 3e-16
Identities = 84/102 (82%), Gaps = 1/102 (1%)
Strand=Plus/Plus
Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122
|| |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||
Sbjct 4940272 TTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCA 4940331
Query 60123 CTATACTACCGAGGA-TTGAATATATAACTTGAATATTACAA 60163
|||||||| |||||| ||| || || ||||||| || ||
Sbjct 4940332 CTATACTATCGAGGACTTGTGTAAGTAGATTGAATACTAAAA 4940373
Score = 98.7 bits (108), Expect = 1e-15
Identities = 82/99 (83%), Gaps = 1/99 (1%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 4942511 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 4942452
Query 60126 TACTACCGAGGA-TTGAATATATAACTTGAATATTACAA 60163
||||| |||||| ||| || || ||||||| || ||
Sbjct 4942451 TACTATCGAGGACTTGCGTAAGTAGATTGAATACTAAAA 4942413
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 9903783 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 9903842
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 9903843 TACTATCGAGGA 9903854
>seq2
Length=51801758
Score = 104 bits (114), Expect = 3e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121
|||||||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||
Sbjct 9499167 TTTTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACC 9499226
Query 60122 ACTATACTACCGAGGAT 60138
||||||||| |||||||
Sbjct 9499227 ACTATACTATCGAGGAT 9499243
Score = 98.7 bits (108), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 9499597 TCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 9499538
Query 60125 ATACTACCGAGGAT 60138
|||||| |||||||
Sbjct 9499537 ATACTATCGAGGAT 9499524
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 19880245 CTCCCCGACGGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 19880304
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 19880305 TACTATCGAGGA 19880316
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 9499922 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 9499981
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 9499982 TACTATCGAGGA 9499993
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 9500525 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 9500584
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 9500585 TACTATCGAGGA 9500596
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 9501245 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 9501304
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 9501305 TACTATCGAGGA 9501316
Score = 95.1 bits (104), Expect = 1e-14
Identities = 68/77 (88%), Gaps = 1/77 (1%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 9501873 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 9501814
Query 60126 TACTACCGAGGA-TTGA 60141
||||| |||||| ||||
Sbjct 9501813 TACTATCGAGGACTTGA 9501797
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 19883274 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 19883215
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 19883214 TACTATCGAGGA 19883203
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 19884587 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 19884646
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 19884647 TACTATCGAGGA 19884658
>seq4
Length=34682002
Score = 96.9 bits (106), Expect = 4e-15
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 20242061 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 20242002
Query 60126 TACTACCGAGGAT 60138
||||| |||||||
Sbjct 20242001 TACTATCGAGGAT 20241989
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571816163308280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |