Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq1 138 7e-28
seq2 114 8e-21
>seq1
Length=37976048
Score = 138 bits (152), Expect = 7e-28
Identities = 168/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || || | |||||||||||| | || || ||||| |||||||||||||||
Sbjct 21735261 CCACCACGGAGGCGCAGCACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAC 21735320
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| |||| |||| ||||||||| ||||| ||||| |||||||| || ||
Sbjct 21735321 AGGGTACGTCCGTCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGA 21735380
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | || | |||| ||| | | |||||
Sbjct 21735381 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 21735440
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCG 34391
|| | |||||||| || || ||||| ||||| || |||||||||||||
Sbjct 21735441 TCAAGGGTGATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCG 21735489
Score = 111 bits (122), Expect = 1e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||| || || |||| | || |||| ||||||||| |||||
Sbjct 36315750 TCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAG 36315691
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
|| || |||||||| || ||| | | ||||||||| ||||| ||| | ||
Sbjct 36315690 ATCAGACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTC 36315631
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | || | | ||||| || | |||||||| ||||||||||| ||||||||
Sbjct 36315630 TCGATGGTGTCCGATGGCTCGACCTCGAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACG 36315571
Query 34379 AAGATCTGCAT 34389
|| ||||||||
Sbjct 36315570 AAAATCTGCAT 36315560
>seq2
Length=51801758
Score = 114 bits (126), Expect = 8e-21
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
||| || ||||| | || |||| ||| | ||| || ||||| ||||||||||||||
Sbjct 21000376 TCCACCACGCAGACGTAGGACCAAGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGGA 21000435
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
|||| || | || |||| |||||| || ||||| || || |||||||| || |||
Sbjct 21000436 CAGCGTGCGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGGGG 21000495
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| || |||||||| |||||| ||| | | | |||| ||| | | |||||
Sbjct 21000496 AATGCCTTCCTTGTCCTGAATCTTTGCCTTCACGTTCTCAATCGTATCCGATGGCTCGAC 21000555
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| |||||||| || || || || || ||||| || ||||||||
Sbjct 21000556 CTCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCAT 21000603
Score = 100 bits (110), Expect = 2e-16
Identities = 172/249 (69%), Gaps = 2/249 (1%)
Strand=Plus/Minus
Query 34141 TTCGTTGCAGATTTCGTCGAATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTC 34200
||||||||| | | | || ||| || ||||| | || |||| ||| | || ||
Sbjct 36664938 TTCGTTGCATAGAT--TAGATTCCACCACGCAGACGGAGGACCAAGTGCAGGGTCGACTC 36664881
Query 34201 TTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAAT 34260
||||| ||||| || |||||||| ||| |||| |||| ||||||||| ||||| ||
Sbjct 36664880 CTTCTGGATGTTATAATCGGACAGGGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGAT 36664821
Query 34261 GAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGC 34320
| |||||||| || || | || ||||||||| ||||| ||| | | |
Sbjct 36664820 CAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTC 36664761
Query 34321 TATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAA 34380
|| | ||| | | || || |||| |||||||| ||||| || | || ||||| ||
Sbjct 36664760 GATGGTATCCGAAGGCTCCACCTCCAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACGAA 36664701
Query 34381 GATCTGCAT 34389
|||||||||
Sbjct 36664700 GATCTGCAT 36664692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323071208574560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |