Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq2 125 6e-24
seq1 87.8 1e-12
>seq2
Length=51801758
Score = 125 bits (138), Expect = 6e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
||||||||||| || ||||||||| ||||| || ||| ||| || |||| |||
Sbjct 36664900 ACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATAATCGGACAGGGTACGTCCGTCCTCC 36664841
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || |||||||| ||||| ||||| || || ||||| | ||||||||||||
Sbjct 36664840 AGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGG 36664781
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | | | ||| | ||||||||||| || || ||||||
Sbjct 36664780 ATCTTGGCCTTCACGTTCTCGATGGTATCCGAAGGCTCCACCTCCAGAGTGATGGTCTTG 36664721
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| |||| |||||||| ||||| |||||
Sbjct 36664720 CCAGTCAAGGTCTTCACGAAGATCTGCAT 36664692
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||| | || | || |||||||||||||| ||||||||| |||||||||||| |
Sbjct 21000377 CCACCACGCAGACGTAGGACCAAGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGGAC 21000436
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| |||| | || ||||| || ||||| ||||| || | ||||| || || || ||
Sbjct 21000437 AGCGTGCGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGGGGA 21000496
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| || ||||||||| ||| ||| ||| || | | | | ||| ||| |||
Sbjct 21000497 ATGCCTTCCTTGTCCTGAATCTTTGCCTTCACGTTCTCAATCGTATCCGATGGCTCGACC 21000556
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340
|||| || || ||||| || ||||| |||||||| || || |||||||||
Sbjct 21000557 TCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCATGTTG 21000607
>seq1
Length=37976048
Score = 87.8 bits (96), Expect = 1e-12
Identities = 148/213 (69%), Gaps = 1/213 (0%)
Strand=Plus/Minus
Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188
|||| ||||| || ||||||||| ||||||||||| || || | || ||||
Sbjct 36315767 CAAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCATCCTCCA 36315708
Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248
| || || |||||||| |||| ||||| || || || || | |||||||||||| |
Sbjct 36315707 GCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGGA 36315648
Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308
| || ||| || | | | | ||||| ||| ||||| | || || |||||||
Sbjct 36315647 TCTTCGCCTTCACATTCTCGATGGTGTCCGATGGCTCGACCTCGAGTGTGATGGTCTTGC 36315588
Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATGTTGC 45341
| || || || ||||| || || ||||| ||||
Sbjct 36315587 CGGTGAGCGTTTTCACGAAAATCTGCATTTTGC 36315555
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395074232189221
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |