Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq1 417 1e-111 >seq1 Length=37976048 Score = 417 bits (462), Expect = 1e-111 Identities = 1217/1861 (65%), Gaps = 46/1861 (2%) Strand=Plus/Plus Query 62067 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 62126 || || ||||| |||| ||| ||||| || ||||| || || | |||| ||||| ||| Sbjct 148875 GCCGGCTTCGTGCGTAAATAATACATCCCTGTTTTAAGGCCCATCTTCCAGCCGTAGAAA 148934 Query 62127 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 62186 || || |||||||| || | || || |||| || ||||| | ||| || | Sbjct 148935 TGAATTGATGTTAGTTTACCGTAGTTTGGCTCAGCTACGTGAATATTGAAAGACTGCGAT 148994 Query 62187 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATTTCC 62246 ||||| || || || || | || || |||||||| ||| || || || |||||| Sbjct 148995 TGATCAATAAATGCCCCTCGATCGGCCGCCATTTTAATGCAAGTTTTCACTGATATTTCC 149054 Query 62247 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTT---TGTATTCTGAATGGA 62302 || | ||||| || | | || || | | || |||| | | |||| || || || Sbjct 149055 CAGACCGTTTTGTACAGATTGCGTA-TGTGTTGCGGAATTTCCTCTATATTTTGTATTGA 149113 Query 62303 TCCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 62362 |||| | ||| ||| | || || || ||||||| ||| | | ||| || | Sbjct 149114 TCCATTGTGGGCCAAGATCTTGTTTTTCATTTCATCATCCCAGAGCTCCAACTCAGTCAG 149173 Query 62363 AACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTA 62422 | | | || | ||| | || || ||||| |||||||| || | || || || |||| Sbjct 149174 ATCCTTTAGCAAATGATGATTCACCACTTGAAATTCTCCTGAGAGCACCCTACGGTTGTA 149233 Query 62423 AATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGC 62482 | || || |||||||| | ||||| || || || | ||||| ||||| || || Sbjct 149234 GACGTTTGATGTGTACGGTTCGAAAGACTCGTTGTTGCCGAGGATTTGGGCAGTCGAAGC 149293 Query 62483 AGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTT 62542 || |||||||| || | | | ||| | | |||||| || ||||| | || Sbjct 149294 GGTTGGCATAGGAGCTAGTAGCAGCGAATTACGCAAACCGTACGTAGCAATTTTTTTCTT 149353 Query 62543 TAGATGTTCCCAATTCCAAAGATCCGACGG-------TACAACANNNNNNNNNNNATATT 62595 || | |||||||||| | || | || | | ||| |||| Sbjct 149354 AAGTTCAGCCCAATTCCACAATTCTGTGGGCTTCCTGTCCCACATATCG-------TATT 149406 Query 62596 GTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCATATGGTCCTTCCTTCTCAG 62655 | ||||| || | || | ||| ||||||| || ||||| || || | ||| Sbjct 149407 GAAGAATTCCTCTGCTAACCGGGCTTCCATCATATGTTTCGTATGGACCATCAAGCGCAG 149466 Query 62656 CTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTA 62715 | | | || || || || | ||| ||| |||||||||||||||| || | | ||||| Sbjct 149467 CCAACTCGCAGCTTGCTTCAAGTGCCCCGAAATAAATGGTTTCAAACATTTGTTGATTTA 149526 Query 62716 GATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATC 62775 || ||||| || ||| | |||| | | || || || || || | | Sbjct 149527 ACAACTGGGCTTCTTCACTTTCATAAGGATGGCGCATCAAGATGAAAGCATCTGCCATGC 149586 Query 62776 CTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA--GATTTCAGCTTCTGGAAT 62833 |||| || || ||||| || || | || | | ||||||| | ||| ||||| || | Sbjct 149587 CTTGCACTCCGATACCTATCGGACGGTGGCGCATATTAGATCGCTTT--GCTTCCGGGAC 149644 Query 62834 AGGATAATAATTAATATCTATAATTTTATTGAGATTTC---TGACAATTACTTTGACCAC 62890 |||||| || || ||||| || ||||| || ||||| | | ||| || ||| | || Sbjct 149645 AGGATAGTAGTTGATATCGATGATTTTGTTCAGATTCCGAGTAACAGTT---TTGGCTAC 149701 Query 62891 ATCCTTCAGTTTGAGAAAATCAAATCGCCCATC---TATTACAAACATGTTCAATGCAAC 62947 ||||| || || ||||| || | ||| | ||||||||||||| | || | Sbjct 149702 CTCCTTTAGCTTCGCGAAATCGTATGTACGATCGGGTTTTACAAACATGTTTAGAGCGAT 149761 Query 62948 AGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCA---TATTGTATTATCTCAGT 63004 || |||||||||||||| || | |||| | | | | |||| | || || || Sbjct 149762 CGAGGCCAGATTACACACAGCAATTTCAT---CTTTTGAAGAGTATTCCACAATTTCGGT 149818 Query 63005 GCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGC 63064 ||| || || ||||||||| ||||| | |||||||| ||||||||| || ||||| Sbjct 149819 GCACAGGTTTGAACACTTGATCGTTCCAACGTTTTGTTGGTTACTCTTTCGATTGCACGC 149878 Query 63065 ATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA 63124 ||| || || || ||| | || ||||| |||| ||| || ||||| || || ||| Sbjct 149879 ATCTTTGTAGAGCATGTAAGGCACTCCAGTCTCAACCTGCGACTCTATGATGGCGAACCA 149938 Query 63125 GACGACTCGAGCCTTTAT-TATAGATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACA 63183 | || | ||||| | | | | | | | | | || | ||||| ||| || | Sbjct 149939 CAAATCTTGCGCCTTAACCTGTCGCGT-GAAACGACCCTCGCGCTCGTAGCCAGTGTAGA 149997 Query 63184 ATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCA 63243 | || |||||| || ||||| | ||| | |||||| || | || ||||| | Sbjct 149998 GTTTTTGGAACTCCTCACCCCATGTCTCCGACAAACCAGGACAATCGTGGGGGCACATTA 150057 Query 63244 ACGACCACTCTCCGTCATCCTTC-ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 63302 | |||| | ||| | |||| || || | ||| || | |||||||||||| ||||| Sbjct 150058 AACTCCACATTTCGTT-TGCTTCGACACGCTGCATGAACAAATCAGGAATCCACAGAGCG 150116 Query 63303 ATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 63362 || | ||||| | | || || ||||| || ||||||||||| || | ||| Sbjct 150117 TAGAACATGTCTCTAGCGCGGACCTCTTCTTTTCCCGTGTTCTTTTTAAGGTCCAAAAAC 150176 Query 63363 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTT 63422 | | ||||| |||||| || ||||| || || || | | ||||| || ||||| Sbjct 150177 TCAAATATATCCCCATGCCATGGCTCCAAATAAATAGCAAATGCCCCAGGTCGCTTGTTA 150236 Query 63423 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 63482 || ||||| || | ||| | || || || || || || | || ||| || | | ||| Sbjct 150237 CCACCCTGGTCCACGTAACGCGCTGTATTGTTGTAGACACGCAGCATAGGTACTAACCCG 150296 Query 63483 TTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTA--CTAATTG 63540 || ||||||||||| || || | ||||| ||| | || | |||| | | ||| Sbjct 150297 TTGGATATACCATTCGTTCCTGCTATATATGTTCCTTTAGCTCTAATACAATGCACATTA 150356 Query 63541 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGA 63600 | ||||||| || || ||| ||||||||| ||||| || |||| | || || || | Sbjct 150357 A--GACCTATGCCACCGGCCGATTTAGAGATCAATGCACACTGTTTGAGAGTATCGTAAA 150414 Query 63601 TGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAG 63660 | || || |||||||| || ||| | || || || ||| |||| ||| | || Sbjct 150415 TTCCCTCGATGCTATCGTCCGACATTGTCAGCAGGAAGCAGGACGACAGTTGTGGTCGTT 150474 Query 63661 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGAT 63720 |||| | ||| ||| | ||| || || ||||||||||| || ||||| || | | Sbjct 150475 GAGTTGCTGCAGCAAACATGGTTGGCGAGGCGTGCGTAAAGTATCGCTCAGACAGCAAGT 150534 Query 63721 TGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTA 63780 ||||||||||||| || | || || || ||| || || | || |||||||| | Sbjct 150535 TGTACGTCTCAATTGCAGCATCAATGTCTGCACCATGTATGCCGATAGCAACACGCATGA 150594 Query 63781 ACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCA 63840 |||||| || || | ||| ||||| || || |||||||||| ||| ||| |||| | Sbjct 150595 GCATGTGTTGTGGCCGTTCTACAATCTTCCCTTTAATTTTCAACAGGTATGATCTTTCTA 150654 Query 63841 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGA 63900 | ||||| ||||| ||||| ||||| |||||| || ||||| || || | ||||| | Sbjct 150655 ATGTTTTGAAACCGAAATAATTGTAACCAAAGTCACGGTCGTAGATGATTGCAGAATTAA 150714 Query 63901 G 63901 | Sbjct 150715 G 150715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816017583280