Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq1 233 2e-56 >seq1 Length=37976048 Score = 233 bits (258), Expect = 2e-56 Identities = 1154/1806 (64%), Gaps = 52/1806 (3%) Strand=Plus/Plus Query 36834 ATAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTT 36893 ||||||||| || ||||| || |||| |||| ||||| ||||| || || ||||| Sbjct 148892 ATAATACATCCCTGTTTTAAGGCCCATCTTCCAGCCGTAGAAATGAATTGATGTTAGTTT 148951 Query 36894 TGCGTATGTAGGATTATCTATAT--ATATTGTCATTGATTGACTTTGATCTATAAACGCA 36951 |||| | || | | ||| | |||||| | || || |||||| ||||| || Sbjct 148952 ACCGTAGTTTGGCTCAGCTACGTGAATATTGAAA--GACTGCGATTGATCAATAAATGCC 149009 Query 36952 CCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGA--GATATCTCCCAAACCGTTTTAT 37009 |||| ||||| ||||||| ||| | | |||| | ||||| ||||| |||||||| | Sbjct 149010 CCTCGATCGGCCGCCATTT-TAATGCA-AGTTTTCACTGATATTTCCCAGACCGTTTTGT 149067 Query 37010 ATATTTGTTTTATATTATCTGGTAAATC---TAAATGTTGAATAGAACCATTATGTAACA 37066 | | | ||| | | || | || || || ||| || || ||||| || || Sbjct 149068 ACAGATTGCGTATGTGTTGCGGAATTTCCTCTATATTTTGTATTGATCCATTGTGGGCCA 149127 Query 37067 CAATTGTATTCTTTATGTCATTATTCCACATATTTCTACTTATT-AGTTCTCTCAATAGG 37125 || | || || || |||| || ||| | | | ||| | | || || | | | Sbjct 149128 AGATCTTGTTTTTCATTTCATCATCCCAGAGCTC-CAACTCAGTCAGATCCTTTAGCAAA 149186 Query 37126 TGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTC--TTGTATATATATTGCTAG 37183 || |||| || || ||||| ||||| || | || || | ||||| | | ||| | | Sbjct 149187 TGATGATTCACCACTTGAAATTCTCCTGAGAGCACCCTACGGTTGTAGACGT-TTGAT-G 149244 Query 37184 TATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTG 37243 | || ||||| | ||||| || || | | ||||| | || || || || ||||| | Sbjct 149245 TGTACGGTTCGAAAGACTCGTTGTTGCCGAGGATTTGGGCAGTCGAAGCGGTTGGCATAG 149304 Query 37244 GTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCC 37303 | |||| ||| || ||| | ||| || | ||| |||| | || || |||||| || Sbjct 149305 GAGCTAGTAGCAGCGAATTACGCAAACCGTACGTAGCAATTTTTTTCTTAAGTTCAGCCC 149364 Query 37304 AATCCCATAAATCTGTTGGGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCG 37363 ||| ||| || ||||| || ||| | ||||||||| ||||| ||||| ||| | || Sbjct 149365 AATTCCACAATTCTGTGGGCTTCCTGTCCCACATATCGTATTGAAGAATTCCTCTGCTAA 149424 Query 37364 CTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATT 37423 | || | | |||||| || || || || | || ||| | ||||| || | || Sbjct 149425 CCGGGCTTCCATCATATGTTTCGTATGGACCATCAAGCGCAGCCAACTCGCAGCTTGCTT 149484 Query 37424 CTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGC 37483 | ||||| | |||| || ||||| || |||||| |||||| | | |||||||| | Sbjct 149485 CAAGTGCCCCGAAATAAATGGTTTCAAACATTTGTTGATTTAACAACTGGGCTTCTTCAC 149544 Query 37484 TATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTA 37543 | || | | || || || || || || |||| |||| || || || |||||||||| Sbjct 149545 TTTCATAAGGATGGCGCATCAAGATGAAAGCATCTGCCATGCCTTGCACTCCGATACCTA 149604 Query 37544 TGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGATAATAATTGATATCTA 37603 | || | || | ||||||||| | ||| || ||||| || |||||||| | Sbjct 149605 TCGGACGGTGGCGCATATTAGATCGCTTTGCTTCCGGGACAGGATAGTAGTTGATATCGA 149664 Query 37604 TTATTTTATTTAGATT---TTTAACTAGTATTTTCGTAATTATTCTCAACTTGTCGAA-- 37658 | ||||| || ||||| |||| ||| ||| || | | | | ||| |||| Sbjct 149665 TGATTTTGTTCAGATTCCGAGTAAC-AGT-TTTGGCTACCTCCT-TTAGCTTCGCGAAAT 149721 Query 37659 CATAAATAC-----GTTATTATTAACAAATTTACTCAACGAAATAGATCCTAGATTACAT 37713 | || ||| | | ||| |||| |||| | || || || | |||||||| Sbjct 149722 CGTATGTACGATCGGGTTTTACAAACATGTTTA--GAGCG--ATCGAGGCCAGATTACAC 149777 Query 37714 ACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGTACAGAGATTACTCGATCTA 37773 ||||||| |||||||| | ||| | ||| || || || || || | | Sbjct 149778 ACAGCAATTTCATCTTTTGAAGAGTATTCCACAATTTCGGTGCACAGGTTTGAACACTTG 149837 Query 37774 ATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATAC 37833 || ||||| | || ||| || ||| ||| || | |||||| || || || || Sbjct 149838 ATCGTTCCAACGTTTTGTTGGTTACTCTTTCGATTGCACGCATCTTTGTAGAGCATGTAA 149897 Query 37834 GGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCTTG---CTTTA 37890 ||| ||| || | || | ||| || || | ||| ||| ||||| ||| | Sbjct 149898 GGCACTCCAGTCTCAACCTGCGACTCTATGATGGCGAACCACAAA--TCTTGCGCCTTAA 149955 Query 37891 ACGATCGCTTTAAtttttttCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTC 37950 | |||| | || || ||||| | | || | ||| | || || | Sbjct 149956 CCTGTCGCGTGAA-ACGACCCTCGCGCTCGTAGCCAGTGTAGAGTTTTTGGAACTCCTCA 150014 Query 37951 CCCCATACATCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCT 38010 |||||| || | || || ||||| ||| || ||||||| | ||| ||| | | Sbjct 150015 CCCCATGTCTCCGACAAACCAGGACAATCGTGGGGGCACATTAAACTCCACATTTCGTTT 150074 Query 38011 TTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTA-AATAAATCTTTGGT 38069 ||| || || | ||| || |||||||| | ||| | || ||| || | ||| | | Sbjct 150075 GCTTCGACACGCTGCATGAACAAATCAGGAATCCACAGAGC-GTAGAACATGTCTCTAGC 150133 Query 38070 TCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCT-TAGAAAATCGAATATATCAGCGT 38128 | ||||| || || |||||| ||||| | | ||| || |||||||| | | Sbjct 150134 GCGGACCTCTTCTTTTCCCGTGTTCTTT-TTAAGGTCCAAAAACTCAAATATATCCCCAT 150192 Query 38129 GCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATAT 38188 ||||||| || | |||||| | | ||| || |||| || | ||| ||||| | | | Sbjct 150193 GCCATGGCTCCAAATAAATAGCAAATGCCCCAGGTCGCTTGTTACCACCCTGGTCCACGT 150252 Query 38189 ATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTA 38248 | | |||| || || || | | | ||||||||||| || || ||| | || || Sbjct 150253 AACGCGCTGTATTGTTGTAGACACGCAGCATAGGTACTAACCCGTTGGATATACCATTCG 150312 Query 38249 TACCGGATATATAAGTACCCTTAGCTCGTATATTACTTATCGACAAT----CCTATTCCA 38304 | || | |||||| || || ||||||| || ||| || ||| | ||||| ||| Sbjct 150313 TTCCTGCTATATATGTTCCTTTAGCTC---TAATAC-AATGCACATTAAGACCTATGCCA 150368 Query 38305 CCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTG 38364 || || ||| || || || || || ||||| | ||||| | || || || || || Sbjct 150369 CCGGCCGATTTAGAGATCAATGCACACTGTTTGAGAGTATCGTAAATTCCCTCGATGCTA 150428 Query 38365 TCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTA 38424 || ||| |||| || | || || |||| ||| || | ||||| | || | Sbjct 150429 TCGTCCGACATTGTCAGCAGGAAGCAGGACGACAGTTGTGGTCGTTGAGTTGCTGCAGCA 150488 Query 38425 AATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATT 38484 || | || || || || || | || || || |||| | || || || || ||| Sbjct 150489 AACATGGTTGGCGAGGCGTGCGTAAAGTATCGCTCAGACAGCAAGTTGTACGTCTCAATT 150548 Query 38485 ACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGT 38544 || |||| || || | || || || || | || || | ||| ||||| |||||||| Sbjct 150549 GCAGCATCAATGTCTGCACCATGTATGCCGATAGCAACACGCATGAGCATGTGTTGTGGC 150608 Query 38545 CTTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCA 38604 | ||||| || || || ||| | || || ||| ||||||||||||| | || Sbjct 150609 CGTTCTACAATCTTCCCTTTAATTTTCAACAGGTATGATCTTTCTAATGTTTTGAAACCG 150668 Query 38605 AAATAA 38610 |||||| Sbjct 150669 AAATAA 150674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468523622831440