Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq1 430 2e-115 >seq1 Length=37976048 Score = 430 bits (476), Expect = 2e-115 Identities = 1215/1855 (65%), Gaps = 32/1855 (2%) Strand=Plus/Plus Query 64860 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 64919 || || ||||| |||| ||| ||||| || ||||| || || | |||| ||||| ||| Sbjct 148875 GCCGGCTTCGTGCGTAAATAATACATCCCTGTTTTAAGGCCCATCTTCCAGCCGTAGAAA 148934 Query 64920 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 64979 || || |||||||| || | || || |||| || ||||| | ||| || | Sbjct 148935 TGAATTGATGTTAGTTTACCGTAGTTTGGCTCAGCTACGTGAATATTGAAAGACTGCGAT 148994 Query 64980 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 65039 ||||| || || || || | || || |||||||| ||| || || || |||||| Sbjct 148995 TGATCAATAAATGCCCCTCGATCGGCCGCCATTTTAATGCAAGTTTTCACTGATATTTCC 149054 Query 65040 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTT---TGTATTCTGAATGGA 65095 || | ||||| || | | || || | | || |||| | | |||| || || || Sbjct 149055 CAGACCGTTTTGTACAGATTGCGTA-TGTGTTGCGGAATTTCCTCTATATTTTGTATTGA 149113 Query 65096 TCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 65155 |||| | |||| ||| | || || || ||||||| ||| | | ||| || | Sbjct 149114 TCCATTGTGGGCCAAGATCTTGTTTTTCATTTCATCATCCCAGAGCTCCAACTCAGTCAG 149173 Query 65156 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 65215 | | | || | ||| |||| || |||||||||||||| || | || || || |||| Sbjct 149174 ATCCTTTAGCAAATGATGATTCACCACTTGAAATTCTCCTGAGAGCACCCTACGGTTGTA 149233 Query 65216 AATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGC 65275 | || || |||||||| | |||||| || || || | ||||| ||||| || || Sbjct 149234 GACGTTTGATGTGTACGGTTCGAAAGACTCGTTGTTGCCGAGGATTTGGGCAGTCGAAGC 149293 Query 65276 AGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTT 65335 || |||||||| || | | | ||| | | |||||| || ||||| | || Sbjct 149294 GGTTGGCATAGGAGCTAGTAGCAGCGAATTACGCAAACCGTACGTAGCAATTTTTTTCTT 149353 Query 65336 TAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAAT 65395 || |||||||||| | || | || ||| ||||| Sbjct 149354 AAGTTCAGCCCAATTCCACAATTCTGTGGGCTTCCTGTCCCACATATCGTATTGAAGAAT 149413 Query 65396 ACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTC 65455 || | || | ||| ||||||| |||||||| || || | |||| | || Sbjct 149414 TCCTCTGCTAACCGGGCTTCCATCATATGTTTCGTATGGACCATCAAGCGCAGCCAACTC 149473 Query 65456 ACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTG 65515 || || || || | ||| ||| ||||||||||||| || || | | ||||| || Sbjct 149474 GCAGCTTGCTTCAAGTGCCCCGAAATAAATGGTTTCAAACATTTGTTGATTTAACAACTG 149533 Query 65516 TGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAAC 65575 ||||| || ||| | |||| | | || || || ||||| | ||||| || Sbjct 149534 GGCTTCTTCACTTTCATAAGGATGGCGCATCAAGATGAAAGCATCTGCCATGCCTTGCAC 149593 Query 65576 ACCAATACCGATAGGTCTATGTCTCTTATTAGA--GATTTCAGCTTCTGGAATAGGATAA 65633 || ||||| || || | || | | ||||||| | ||| ||||| || | |||||| Sbjct 149594 TCCGATACCTATCGGACGGTGGCGCATATTAGATCGCTTT--GCTTCCGGGACAGGATAG 149651 Query 65634 TAATTAATATCTATAATTTTATTGAGATTTC---TGACAATTACTTTGACCACATCCTTC 65690 || || ||||| || ||||| || ||||| | | ||| || ||| | || ||||| Sbjct 149652 TAGTTGATATCGATGATTTTGTTCAGATTCCGAGTAACAGTT---TTGGCTACCTCCTTT 149708 Query 65691 AGTTTGAGAAAATCAAAT---CGCTCATCTATTACAAACATGTTCAATGCAACAGATGCC 65747 || || ||||| || || || | ||||||||||||| | || | || ||| Sbjct 149709 AGCTTCGCGAAATCGTATGTACGATCGGGTTTTACAAACATGTTTAGAGCGATCGAGGCC 149768 Query 65748 AGATTACAAACGGCTACCTCATTAGCATCCGCA---TATTGTATTATCTCAGTGCAAAGA 65804 |||||||| || || | |||| | | | | |||| | || || ||||| || Sbjct 149769 AGATTACACACAGCAATTTCAT---CTTTTGAAGAGTATTCCACAATTTCGGTGCACAGG 149825 Query 65805 TTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTA 65864 || ||||||||| ||||| | |||||||| ||||||||| || |||||||| || Sbjct 149826 TTTGAACACTTGATCGTTCCAACGTTTTGTTGGTTACTCTTTCGATTGCACGCATCTTTG 149885 Query 65865 TAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACT 65924 || || ||| | || ||||| |||| ||| || ||||| || || ||| | || Sbjct 149886 TAGAGCATGTAAGGCACTCCAGTCTCAACCTGCGACTCTATGATGGCGAACCACAAATCT 149945 Query 65925 CGAGCCTTTAT-TATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTC 65983 | ||||| | | | | | | | | || | ||||| || || | | || Sbjct 149946 TGCGCCTTAACCTGTCGCGT-GAAACGACCCTCGCGCTCGTAGCCAGTGTAGAGTTTTTG 150004 Query 65984 GAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCA 66043 |||||| || ||||| | ||| |||||||| || | || ||||| || ||| Sbjct 150005 GAACTCCTCACCCCATGTCTCCGACAAACCAGGACAATCGTGGGGGCACATTAAACTCCA 150064 Query 66044 CTCTCCGTCATCCTTC-ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATA 66102 | | ||| | |||| || || | ||| || | |||||||||||| ||||| || | Sbjct 150065 CATTTCGTT-TGCTTCGACACGCTGCATGAACAAATCAGGAATCCACAGAGCGTAGAACA 150123 Query 66103 AATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAA 66162 ||||| | | || || ||||| || ||||||||||| || | ||| | | | Sbjct 150124 TGTCTCTAGCGCGGACCTCTTCTTTTCCCGTGTTCTTTTTAAGGTCCAAAAACTCAAATA 150183 Query 66163 TATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCT 66222 |||| |||||| || ||||| || || || | | ||||| || ||||| || |||| Sbjct 150184 TATCCCCATGCCATGGCTCCAAATAAATAGCAAATGCCCCAGGTCGCTTGTTACCACCCT 150243 Query 66223 GATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATG 66282 | || | ||| | || || || || || || | || ||| || | | || |||||| Sbjct 150244 GGTCCACGTAACGCGCTGTATTGTTGTAGACACGCAGCATAGGTACTAACCCGTTGGATA 150303 Query 66283 TACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTA--CTAATTGATAGACC 66340 ||||||| || || | ||||| |||| | || | |||| | | ||| | |||| Sbjct 150304 TACCATTCGTTCCTGCTATATATGTTCCTTTAGCTCTAATACAATGCACATTAA--GACC 150361 Query 66341 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 66400 ||| || || ||| ||||||||| ||||| || |||| | ||||| || || ||||| Sbjct 150362 TATGCCACCGGCCGATTTAGAGATCAATGCACACTGTTTGAGAGTATCGTAAATTCCCTC 150421 Query 66401 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 66460 || ||||| ||| ||| | || || || ||| |||| ||| | || |||| | Sbjct 150422 GATGCTATCGTCCGACATTGTCAGCAGGAAGCAGGACGACAGTTGTGGTCGTTGAGTTGC 150481 Query 66461 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 66520 ||| ||| | ||| || || ||||||||||| || ||||| || | |||||||| Sbjct 150482 TGCAGCAAACATGGTTGGCGAGGCGTGCGTAAAGTATCGCTCAGACAGCAAGTTGTACGT 150541 Query 66521 CTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTG 66580 |||||| || | || || || ||| || || | || |||||||| | |||||| Sbjct 150542 CTCAATTGCAGCATCAATGTCTGCACCATGTATGCCGATAGCAACACGCATGAGCATGTG 150601 Query 66581 CTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTT 66640 || || | ||| || ||||| || |||||||||| ||| ||| |||| || ||||| Sbjct 150602 TTGTGGCCGTTCTACAATCTTCCCTTTAATTTTCAACAGGTATGATCTTTCTAATGTTTT 150661 Query 66641 AAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGT 66695 ||||| ||||| ||||| |||||| || ||||| || || | || || ||| Sbjct 150662 GAAACCGAAATAATTGTAACCAAAGTCACGGTCGTAGATGATTGCAGAATTAAGT 150716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658171146340840