Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq3 100 2e-16 seq2 89.7 4e-13 >seq3 Length=33601328 Score = 100 bits (110), Expect = 2e-16 Identities = 121/163 (74%), Gaps = 4/163 (2%) Strand=Plus/Plus Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCA--TTTGCGGCCA 22798 ||| || |||| || || ||||| || ||| || | || | | | || |||||||||| Sbjct 22123324 CGTATCGTGGCGTTCGCAGCTGTCGAGGGCATCTTCTT--CAGCGGCAGCTTTGCGGCCA 22123381 Query 22799 TATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTA 22858 | |||||||||||||| ||| || ||||| || ||| |||| ||||| |||||||| Sbjct 22123382 TCTTCTGGCTGAAGAAGCGTGGCCTGATGCCGGGTTTGACGTTCTCCAATGAGTTGATCT 22123441 Query 22859 GCCGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTT 22901 || || |||||| | || || |||||||| ||| | |||| Sbjct 22123442 CGCGCGATGAAGGTTTGCATTGCGACTTTGCCTGTCTCATGTT 22123484 >seq2 Length=51801758 Score = 89.7 bits (98), Expect = 4e-13 Identities = 113/153 (74%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 33565 CGCATACCAGAGATGGGCGACAAGTTTGCATC-GTTCACGGCCCAGAAGGGCACGTGCGG 33623 ||||| || |||| || ||||||||||| || ||||| |||||| ||||||||||| Sbjct 48853901 CGCATCCCGCAGATTGGAGACAAGTTTGCTTCTCGCCACGG-CCAGAAAGGCACGTGCGG 48853959 Query 33624 CATGATGTACGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGT 33683 || |||| ||| ||| |||||||||||| ||| ||| | |||||| | | Sbjct 48853960 TATTCAGTACCGGCAGGAGGATATGCCGTTCACGTGCGAAGGCATCACGCCGGACATTAT 48854019 Query 33684 CATCAACCCGCATGCGTTCCCCTCGCGCATGAC 33716 |||||||||||| || | || || || ||||| Sbjct 48854020 CATCAACCCGCACGCCATTCCGTCCCGTATGAC 48854052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356232727339003