Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1 457 1e-123 seq3 93.3 6e-14 >seq1 Length=37976048 Score = 457 bits (506), Expect = 1e-123 Identities = 1219/1850 (66%), Gaps = 22/1850 (1%) Strand=Plus/Plus Query 78739 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAA 78798 || || ||||| |||| ||| ||||| || ||||| || || | |||| ||||||||| Sbjct 148875 GCCGGCTTCGTGCGTAAATAATACATCCCTGTTTTAAGGCCCATCTTCCAGCCGTAGAAA 148934 Query 78799 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 78858 || || |||||||| || | || || |||| || ||||| | ||| || | Sbjct 148935 TGAATTGATGTTAGTTTACCGTAGTTTGGCTCAGCTACGTGAATATTGAAAGACTGCGAT 148994 Query 78859 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 78918 ||||| || || || || | || || |||||||| ||| || || || |||||| Sbjct 148995 TGATCAATAAATGCCCCTCGATCGGCCGCCATTTTAATGCAAGTTTTCACTGATATTTCC 149054 Query 78919 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTT---TGTATTCTGAATGGA 78974 || | ||||| || | | || || | | || |||| | | |||| || || || Sbjct 149055 CAGACCGTTTTGTACAGATTGCGTA-TGTGTTGCGGAATTTCCTCTATATTTTGTATTGA 149113 Query 78975 TCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAA 79034 |||| | |||| ||| | || || || || |||| ||| | | ||| || | Sbjct 149114 TCCATTGTGGGCCAAGATCTTGTTTTTCATTTCATCATCCCAGAGCTCCAACTCAGTCAG 149173 Query 79035 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 79094 | | | || | ||| |||| || |||||||||||||| || | || || || |||| Sbjct 149174 ATCCTTTAGCAAATGATGATTCACCACTTGAAATTCTCCTGAGAGCACCCTACGGTTGTA 149233 Query 79095 AATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGC 79154 | || || || ||||| | || || || || || | ||||| ||||| || || Sbjct 149234 GACGTTTGATGTGTACGGTTCGAAAGACTCGTTGTTGCCGAGGATTTGGGCAGTCGAAGC 149293 Query 79155 CGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTTTATCTTT 79214 ||||||||||| || | | | ||| | | |||||| | ||||| | || Sbjct 149294 GGTTGGCATAGGAGCTAGTAGCAGCGAATTACGCAAACCGTACGTAGCAATTTTTTTCTT 149353 Query 79215 TAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAAT 79274 || |||||| ||| | || | || | ||| | ||| ||||| ||||| Sbjct 149354 AAGTTCAGCCCAATTCCACAATTCTGTGGGCTTCCTGTCCCACATATCGTATTGAAGAAT 149413 Query 79275 ACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTC 79334 || | ||| | ||| |||||||| || || || || | || || || Sbjct 149414 TCCTCTGCTAACCGGGCTTCCATCATATGTTTCGTATGGACCATCAAGCGCAGCCAACTC 149473 Query 79335 ACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTG 79394 || || || || | ||| ||| ||||||||||||| || || | | ||| | || Sbjct 149474 GCAGCTTGCTTCAAGTGCCCCGAAATAAATGGTTTCAAACATTTGTTGATTTAACAACTG 149533 Query 79395 TGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAAC 79454 |||||| || ||| | |||| | | || || || ||||| | ||||| || Sbjct 149534 GGCTTCTTCACTTTCATAAGGATGGCGCATCAAGATGAAAGCATCTGCCATGCCTTGCAC 149593 Query 79455 ACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATA 79514 || ||||| || || | || | | ||||||| | ||||| || | |||||| || Sbjct 149594 TCCGATACCTATCGGACGGTGGCGCATATTAGATCGCTTTGCTTCCGGGACAGGATAGTA 149653 Query 79515 ATTAATATCTATAATTTTATTGAGATTCCTGACTATTACTTT-GACCACATCCTTTAGTT 79573 || ||||| || ||||| || ||||||| || || | ||| | | || |||||||| | Sbjct 149654 GTTGATATCGATGATTTTGTTCAGATTCC-GAGTAACAGTTTTGGCTACCTCCTTTAGCT 149712 Query 79574 TGAGAAAATCAAATCGTCCATC---TATTACAAACATGTTCAACGCGACAGATGCCAGAT 79630 | ||||| || | ||| | ||||||||||||| | |||| || ||||||| Sbjct 149713 TCGCGAAATCGTATGTACGATCGGGTTTTACAAACATGTTTAGAGCGATCGAGGCCAGAT 149772 Query 79631 TACAAACGGCTACCTCATTAGCATCCGCA---TATTGTATTATTTCAGTGCAGAGGTTAC 79687 |||| || || | |||| | | | | |||| | ||||| ||||| ||||| Sbjct 149773 TACACACAGCAATTTCAT---CTTTTGAAGAGTATTCCACAATTTCGGTGCACAGGTTTG 149829 Query 79688 TACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAA 79747 |||||| || ||||| | |||||||| ||||||||| || |||||||| || || | Sbjct 149830 AACACTTGATCGTTCCAACGTTTTGTTGGTTACTCTTTCGATTGCACGCATCTTTGTAGA 149889 Query 79748 GAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAG 79807 | ||| | || ||||| |||| ||| || ||||| || || ||| | || | | Sbjct 149890 GCATGTAAGGCACTCCAGTCTCAACCTGCGACTCTATGATGGCGAACCACAAATCTTGCG 149949 Query 79808 CCTTTAT-TATAGACTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAAC 79866 |||| | | | | | || | | || | ||||| || || | | || |||| Sbjct 149950 CCTTAACCTGTCG-CGTGAAACGACCCTCGCGCTCGTAGCCAGTGTAGAGTTTTTGGAAC 150008 Query 79867 TCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCT 79926 || || ||||| || || |||||||| |||| || ||||| || |||| | Sbjct 150009 TCCTCACCCCATGTCTCCGACAAACCAGGACAATCGTGGGGGCACATTAAACTCCACATT 150068 Query 79927 CCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCT 79986 | | | | || || | ||| || | |||||||||||| ||||| || | ||| Sbjct 150069 TCGTTTGCTTCGACACGCTGCATGAACAAATCAGGAATCCACAGAGCGTAGAACATGTCT 150128 Query 79987 CTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCA 80046 || | | ||| || ||||| || ||||||||||| || | ||| | | ||||| Sbjct 150129 CTAGCGCGGACCTCTTCTTTTCCCGTGTTCTTTTTAAGGTCCAAAAACTCAAATATATCC 150188 Query 80047 GAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCT 80106 |||||| || ||||| || || || | | || ||||| ||||| || ||||| || Sbjct 150189 CCATGCCATGGCTCCAAATAAATAGCAAATGCCCCAGGTCGCTTGTTACCACCCTGGTCC 150248 Query 80107 ATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCA 80166 | ||| | || || || || || || | || ||| || | | || |||||| ||||| Sbjct 150249 ACGTAACGCGCTGTATTGTTGTAGACACGCAGCATAGGTACTAACCCGTTGGATATACCA 150308 Query 80167 TTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTA--CTAATTGATAGACCTATTC 80224 || || || | ||||| |||| | || | |||| | | ||| | ||||||| | Sbjct 150309 TTCGTTCCTGCTATATATGTTCCTTTAGCTCTAATACAATGCACATTAA--GACCTATGC 150366 Query 80225 CCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGC 80284 | || ||| ||||||||| ||||| || |||| | ||||| || || ||||| |||| Sbjct 150367 CACCGGCCGATTTAGAGATCAATGCACACTGTTTGAGAGTATCGTAAATTCCCTCGATGC 150426 Query 80285 TATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCAT 80344 |||| || ||| | || || || ||| |||| ||| | || |||| | ||| Sbjct 150427 TATCGTCCGACATTGTCAGCAGGAAGCAGGACGACAGTTGTGGTCGTTGAGTTGCTGCAG 150486 Query 80345 TAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAA 80404 ||| | ||| || || ||||||||||| || |||||||| | ||||||||||||| Sbjct 150487 CAAACATGGTTGGCGAGGCGTGCGTAAAGTATCGCTCAGACAGCAAGTTGTACGTCTCAA 150546 Query 80405 TAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAG 80464 | || | || || || ||| || || | || |||||||| | |||||| || | Sbjct 150547 TTGCAGCATCAATGTCTGCACCATGTATGCCGATAGCAACACGCATGAGCATGTGTTGTG 150606 Query 80465 GTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAAC 80524 | | ||| || ||||| || |||||||||| ||| ||| |||| || ||||| |||| Sbjct 150607 GCCGTTCTACAATCTTCCCTTTAATTTTCAACAGGTATGATCTTTCTAATGTTTTGAAAC 150666 Query 80525 CAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGT 80574 | ||||| ||||| |||||| || ||||| || || | || || ||| Sbjct 150667 CGAAATAATTGTAACCAAAGTCACGGTCGTAGATGATTGCAGAATTAAGT 150716 >seq3 Length=33601328 Score = 93.3 bits (102), Expect = 6e-14 Identities = 180/261 (69%), Gaps = 11/261 (4%) Strand=Plus/Minus Query 49948 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 50007 || ||||| | ||| || || ||||| |||| ||| || || | || | || ||| Sbjct 22123487 TTGAACATGAGACAGGCAAAGTCGCAATGCAAACCTTCATCGCGCGAGATCAACTCATTG 22123428 Query 50008 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAA--TG 50065 || ||||| | || ||||| ||||||||||| || ||||| || |||| |||||| || Sbjct 22123427 GAGAACGTCAAACCCGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGCCGCAAAGCTG 22123368 Query 50066 ACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG 50125 | | | |||||||| || || || || || || || || | | ||| || || ||| Sbjct 22123367 CCGCTG--AAGAAGATGCCCTCGACAGCTGCGAACGCCACGATACGCTCGCCGTAGTTGG 22123310 Query 50126 CGCTGTCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 50180 | || || || ||||| || ||||| || ||||| || ||||| |||| Sbjct 22123309 C-CT-TCTTGCTCGAGATCCAGTTCATCGCCCAGTCCGCCTTACGCTTCACACACGGCAG 22123252 Query 50181 CGTTTCTATGGCATTAAAGAG 50201 ||| || |||||||| || || Sbjct 22123251 CGTCTCGATGGCATTGAACAG 22123231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718266995349640