Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1 426 2e-114 seq3 95.1 2e-14 >seq1 Length=37976048 Score = 426 bits (472), Expect = 2e-114 Identities = 1229/1882 (65%), Gaps = 26/1882 (1%) Strand=Plus/Plus Query 70792 TTGTCCAATGTAAACTGAATGGGAG-AGGATGCGGCTTTCGTACGTAGATAGTACATGCC 70850 ||||| | ||||||||||| | | | | |||||| ||| |||| ||| ||||| || Sbjct 148845 TTGTCAACGGTAAACTGAATCGCATTAACAGCCGGCTT-CGTGCGTAAATAATACATCCC 148903 Query 70851 TGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGG 70910 |||||| || || | |||| ||||| ||||| || |||||||| ||| | || Sbjct 148904 TGTTTTAAGGCCCATCTTCCAGCCGTAGAAATGAATTGATGTTAGTTTACCGTAGTTTGG 148963 Query 70911 ATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 70970 || |||| ||||||||| | ||||| |||||| || || || || | || || || Sbjct 148964 CTCAGCTACGTGAATATTGAAAGACTGCGATTGATCAATAAATGCCCCTCGATCGGCCGC 149023 Query 70971 CATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATAT 71029 |||||| ||| || || || |||||||| | ||||| || | | || || | | Sbjct 149024 CATTTTAATGCAAGTTTTCACTGATATTTCCCAGACCGTTTTGTACAGATTGCGTA-TGT 149082 Query 71030 CTTCTGGAAGGTT---TGTATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGA 71086 || |||| | | |||| || || |||||| | || | ||| | ||||| | Sbjct 149083 GTTGCGGAATTTCCTCTATATTTTGTATTGATCCATTGTGGGCCAAGATCTTGTTTTTCA 149142 Query 71087 TCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTT 71146 | || |||| ||| | | ||| || | | | | || | |||| |||| || |||| Sbjct 149143 TTTCATCATCCCAGAGCTCCAACTCAGTCAGATCCTTTAGCAAATGATGATTCACCACTT 149202 Query 71147 GAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACT 71206 |||||||||| || | || ||||| |||| | || || |||||||| | |||| Sbjct 149203 GAAATTCTCCTGAGAGCACCCTACGGTTGTAGACGTTTGATGTGTACGGTTCGAAAGACT 149262 Query 71207 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTAT 71266 | || || || | ||||| ||||| || || || |||||||| || | | || || Sbjct 149263 CGTTGTTGCCGAGGATTTGGGCAGTCGAAGCGGTTGGCATAGGAGCTAGTAGCAGCGAAT 149322 Query 71267 TTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATT--CCCAATTCCAAAGATCCGA 71324 | | | ||| | | | | | ||| | | ||| || | |||||||||| | || | Sbjct 149323 TACGCAAACCGTACG-TAGCAATTTTTTTCTTA-AGTTCAGCCCAATTCCACAATTCTGT 149380 Query 71325 TGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATA 71384 || || || | ||| | ||| |||| Sbjct 149381 GGGCTTCCTGTCCCACATATCGTATTGAAGAATTCCTCTGCTAACCGGGCTTCCATCATA 149440 Query 71385 TGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATA 71444 ||| |||||||| || || | || | || || || || || | ||| || |||| Sbjct 149441 TGTTTCGTATGGACCATCAAGCGCAGCCAACTCGCAGCTTGCTTCAAGTGCCCCGAAATA 149500 Query 71445 AATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATT 71504 ||||||||| || || | | ||| | || ||||| || ||| | |||| Sbjct 149501 AATGGTTTCAAACATTTGTTGATTTAACAACTGGGCTTCTTCACTTTCATAAGGATGGCG 149560 Query 71505 TAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTT 71564 | | || || || ||||| | ||||| || || ||||| || || | ||| | | | Sbjct 149561 CATCAAGATGAAAGCATCTGCCATGCCTTGCACTCCGATACCTATCGGACGGTGGCGCAT 149620 Query 71565 ATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 71624 |||||| | ||||| || | |||||| || || ||||| || ||||| || ||||| Sbjct 149621 ATTAGATCGCTTTGCTTCCGGGACAGGATAGTAGTTGATATCGATGATTTTGTTCAGATT 149680 Query 71625 TCTGACTATTACTTT-GACCACATCCTTTAGTTTGAGAAAATCAAATCTCCCATC---TA 71680 | || || | ||| | | || |||||||| || ||||| || | | ||| | Sbjct 149681 CC-GAGTAACAGTTTTGGCTACCTCCTTTAGCTTCGCGAAATCGTATGTACGATCGGGTT 149739 Query 71681 TTACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGG 71740 ||||||||| ||| | || | || ||||||||||| || || | |||| | | | Sbjct 149740 TTACAAACATGTTTAGAGCGATCGAGGCCAGATTACACACAGCAATTTCAT---CTTTTG 149796 Query 71741 CA---TATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTT 71797 | |||| | |||||| ||||| || || ||||||||| ||||| | ||||||| Sbjct 149797 AAGAGTATTCCACAATTTCGGTGCACAGGTTTGAACACTTGATCGTTCCAACGTTTTGTT 149856 Query 71798 GATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCT 71857 | ||||||||| || |||||||| || || || || | || ||||| |||| || Sbjct 149857 GGTTACTCTTTCGATTGCACGCATCTTTGTAGAGCATGTAAGGCACTCCAGTCTCAACCT 149916 Query 71858 GAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTT 71917 | || ||||| || || ||| | || | ||||| | | || | | | Sbjct 149917 GCGACTCTATGATGGCGAACCACAAATCTTGCGCCTTAACCTGTCGCGTGAAACGACCCT 149976 Query 71918 CTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAG 71977 | | ||||| || || | | || |||||| || ||||| | | || |||| Sbjct 149977 CGCGCTCGTAGCCAGTGTAGAGTTTTTGGAACTCCTCACCCCATGTCTCCGACAAACCAG 150036 Query 71978 GACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGA 72037 |||| || | || ||||| || |||| | | | | | || || | ||| || | Sbjct 150037 GACAATCGTGGGGGCACATTAAACTCCACATTTCGTTTGCTTCGACACGCTGCATGAACA 150096 Query 72038 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTAT 72097 |||||||||||| ||||| || | ||||| | | ||| || ||||| || | Sbjct 150097 AATCAGGAATCCACAGAGCGTAGAACATGTCTCTAGCGCGGACCTCTTCTTTTCCCGTGT 150156 Query 72098 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 72157 |||||||||| || | ||| | | ||||| |||||| || ||||| || || || | Sbjct 150157 TCTTTTTAAGGTCCAAAAACTCAAATATATCCCCATGCCATGGCTCCAAATAAATAGCAA 150216 Query 72158 TAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 72217 | || || || ||||| || ||||| || | ||| | || || || || || || | Sbjct 150217 ATGCCCCAGGTCGCTTGTTACCACCCTGGTCCACGTAACGCGCTGTATTGTTGTAGACAC 150276 Query 72218 TCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGG 72277 || ||| || | | || |||||| |||||| || || | ||||| |||| | | Sbjct 150277 GCAGCATAGGTACTAACCCGTTGGATATACCATTCGTTCCTGCTATATATGTTCCTTTAG 150336 Query 72278 CACGAATAT--TGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 72335 | | |||| ||| ||| | ||||||| || || ||| ||||||||| ||||| || Sbjct 150337 CTCTAATACAATGCACATTAA--GACCTATGCCACCGGCCGATTTAGAGATCAATGCACA 150394 Query 72336 TCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACA 72395 |||| | ||||| || || ||||| || ||||| ||| ||| | || || || || Sbjct 150395 CTGTTTGAGAGTATCGTAAATTCCCTCGATGCTATCGTCCGACATTGTCAGCAGGAAGCA 150454 Query 72396 GCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAA 72455 | |||| ||| | || |||| | ||| ||| | ||| || || ||||||||||| Sbjct 150455 GGACGACAGTTGTGGTCGTTGAGTTGCTGCAGCAAACATGGTTGGCGAGGCGTGCGTAAA 150514 Query 72456 CCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTAT 72515 || |||||||| | |||||||||||||| || | || || || |||||| Sbjct 150515 GTATCGCTCAGACAGCAAGTTGTACGTCTCAATTGCAGCATCAATGTCTGCACCATGTAT 150574 Query 72516 TCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTT 72575 || | || |||||||| | ||| || || || | ||| || ||||| || ||||| Sbjct 150575 GCCGATAGCAACACGCATGAGCATGTGTTGTGGCCGTTCTACAATCTTCCCTTTAATTTT 150634 Query 72576 CAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTC 72635 ||||| ||| ||| |||| || ||||| ||||| ||||| ||||| |||||| || || Sbjct 150635 CAACAGGTATGATCTTTCTAATGTTTTGAAACCGAAATAATTGTAACCAAAGTCACGGTC 150694 Query 72636 GTAAATAATAACCGAATTGAGT 72657 ||| || || | ||||| ||| Sbjct 150695 GTAGATGATTGCAGAATTAAGT 150716 >seq3 Length=33601328 Score = 95.1 bits (104), Expect = 2e-14 Identities = 178/262 (68%), Gaps = 0/262 (0%) Strand=Plus/Minus Query 42335 TATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAAT 42394 ||||| ||||| | || ||||| || || | |||||| || || ||||| || Sbjct 22123132 TATGTGTCGATAAGCAGCGAGTACATCTCGCTGTGCACGTTTTCCATAGCGATCTGGAAA 22123073 Query 42395 CCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTT 42454 || |||||||| | ||||| || ||||| || || | || ||||| | | |||| Sbjct 22123072 CCATAGAAACAGCGAGCCTCCGTCACCTGAACCTCCTGGCTGAACCGTTCGACCAGATTT 22123013 Query 42455 TCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTT 42514 |||||||| || || || ||| ||||| || || | ||||| ||||| | Sbjct 22123012 TCGTTCACGATACCATCGGAGGCGGCAAAGAAGGCGAGCACATGCGAGATAAAGTGACGC 22122953 Query 42515 TCGTCCGGTGTTAATTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACC 42574 ||| ||| | | || ||| || || || || ||||||| ||| || ||||| ||| Sbjct 22122952 TCGCTCGGCTTCAGCGCATCCCAGTCTTTCATGTCCTTAGATAGATCGACCTCTTCGACC 22122893 Query 42575 GTCCAAAATGATGCTTCTGCCT 42596 ||||| || || ||||| |||| Sbjct 22122892 GTCCAGAAAGAAGCTTCGGCCT 22122871 Score = 86.0 bits (94), Expect = 8e-12 Identities = 176/259 (68%), Gaps = 7/259 (3%) Strand=Plus/Minus Query 42053 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTG 42112 || ||||| | ||| || || ||||| |||| ||| ||||| | || || || ||| Sbjct 22123487 TTGAACATGAGACAGGCAAAGTCGCAATGCAAACCTTCATCGCGCGAGATCAACTCATTG 22123428 Query 42113 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGAT 42172 || ||||| | || ||||| ||||||||||| || ||||| || || | |||||| Sbjct 22123427 GAGAACGTCAAACCCGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGCCGCAAAGCTG 22123368 Query 42173 CCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCA 42232 || |||||||| || || || || || || || | | | ||| || || ||| Sbjct 22123367 CCGCTGAAGAAGATGCCCTCGACAGCTGCGAACGCCACGATACGCTCGCCGTAGTTGGC- 22123309 Query 42233 CTGTCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 42287 || || || ||||| || ||||| || ||||| || ||||| |||| || Sbjct 22123308 CT-TCTTGCTCGAGATCCAGTTCATCGCCCAGTCCGCCTTACGCTTCACACACGGCAGCG 22123250 Query 42288 TTTCTATGGCATTAAAGAG 42306 | || |||||||| || || Sbjct 22123249 TCTCGATGGCATTGAACAG 22123231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671137513762760