Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq1 102 8e-17 >seq1 Length=37976048 Score = 102 bits (112), Expect = 8e-17 Identities = 533/842 (63%), Gaps = 23/842 (3%) Strand=Plus/Plus Query 156143 ACGGTAAATTGCTGCGAATTGGCCGCCGGAAGTGTGCGAAAATAGTACATGCCGGTTTTG 156202 |||||||| || || ||| | ||||| ||||| ||||| ||||| || ||||| Sbjct 148851 ACGGTAAACTGAATCGCATTAACAGCCGGCTTCGTGCGTAAATAATACATCCCTGTTTTA 148910 Query 156203 AGGCCGCGCTTCCAACCGTACATGTGCACCGACGCCATTTTAGGCAAAGTAGGGTTTGCC 156262 ||||| |||||| ||||| | || | || | | |||| | | || | || Sbjct 148911 AGGCCCATCTTCCAGCCGTAGAAATGAATTGATGTTAGTTTACCGTAGTTTGGCTCAGCT 148970 Query 156263 ATGTACACGTTGAACGATTGACTTTGATCGATAAATGCTCCCCTGTCTGCTGCCATTTCA 156322 | || | ||||| || || |||||| |||||||| || | || || ||||||| | Sbjct 148971 ACGTGAATATTGAAAGACTGCGATTGATCAATAAATGCCCCTCGATCGGCCGCCATTTTA 149030 Query 156323 AT-CATATATTTTCCATTGTTCTCCCAAATTTCCCAGATTGTCATGTACAGCTTTTTTAG 156381 || || | ||| || || | |||||||||| || ||||||| || || Sbjct 149031 ATGCA---AGTTTTCACTGAT-------ATTTCCCAGACCGTTTTGTACAGATTGCGTAT 149080 Query 156382 ATTGTCGGGAATTTTGGCGATAGAAGCTATCGATCCTCTGTTTGCCATGAT--TGTTTTT 156439 | | ||||||| | ||| ||| ||||| ||| |||| ||| ||||||| Sbjct 149081 GTGTTGCGGAATTTCCTCTATATTTTGTATTGATCCATTGTGGGCCAAGATCTTGTTTTT 149140 Query 156440 CGCATACTATTTGTATAGAGATTTAATTTGATTAGATCATCGACCAAGTAGCGGTTGACA 156499 | || || |||| | || | | ||||| | | ||| | | || || Sbjct 149141 C--ATTTCATCATCCCAGAGCTCCAACTCAGTCAGATCCTTTAGCAAATGATGATTCACC 149198 Query 156500 ACTTGAAATTCGCCCGACAAAACACGTC--TCAAAAACAAATTACTGTGAAACGGTTCAA 156557 ||||||||||| || || | || | | | | || | | |||| | |||||| | Sbjct 149199 ACTTGAAATTCTCCTGAGAGCACCCTACGGTTGTAGACGTTTGA-TGTGTA-CGGTTCGA 149256 Query 156558 ATGACTCGTTGTTGTTGAGTATTTGTGCGGTCGTGGCCGTCGGCATGTACGCCACAAGCA 156617 | |||||||||||| ||| ||||| || |||| || || ||||| || | |||| Sbjct 149257 AAGACTCGTTGTTGCCGAGGATTTGGGCAGTCGAAGCGGTTGGCATAGGAGCTAGTAGCA 149316 Query 156618 ATGAATTACGTAATCCGTATTTTTGTATATTTATTTTCAACTGTGACCAGTCCCATAACG 156677 |||||||| || ||||| | || ||| | || | | | ||| | ||| || Sbjct 149317 GCGAATTACGCAAACCGTACGTAGCAATTTTTTTCTTAAGTTCAGCCCAATTCCACAATT 149376 Query 156678 AAGTCGGTACCGTATTCCACAAATCGTATTGCAATATTCCTTCGCTCGCTTTGCTACCGG 156737 || || | | | ||||| ||||||||| | |||||| ||| | ||| || Sbjct 149377 CTGTGGGCTTCCTGTCCCACATATCGTATTGAAGAATTCCTCTGCTAACCGGGCTTCCAT 149436 Query 156738 CAAACGTGCTATAAGGCTCACTAACAGATGCCAGTTCGTAACTGGCCTCGAGCGCAGCAT 156797 || | || || || || || | |||| ||| | || || || || || | Sbjct 149437 CATATGTTTCGTATGGACCATCAAGCGCAGCCAACTCGCAGCTTGCTTCAAGTGCCCCGA 149496 Query 156798 GATACACAGTTTCAGCAATTTGTTTATTCAATAGAACGGCAGCATCGCTCACGTACGGTA 156857 ||| | |||||| ||||||| ||| || | ||| | || || | || || Sbjct 149497 AATAAATGGTTTCAAACATTTGTTGATTTAACAACTGGGCTTCTTCACTTTCATAAGGAT 149556 Query 156858 TGCGCAACATAACAAATGCATCGGCCAAACCTTGAATGCCAATGCCGATGGGACGATGGC 156917 ||||| || | || ||||| |||| ||||| | || || || || ||||| |||| Sbjct 149557 GGCGCATCAAGATGAAAGCATCTGCCATGCCTTGCACTCCGATACCTATCGGACGGTGGC 149616 Query 156918 GCATATTAGAtttttttGCAGTTTC--AATAGGGTAGAAATTGCGATCAATAATTTTATT 156975 ||||||||||| ||||| || | | ||| ||| | ||| ||| || ||||| || Sbjct 149617 GCATATTAGATCGCTTTGC--TTCCGGGACAGGATAGTAGTTGATATCGATGATTTTGTT 149674 Query 156976 CA 156977 || Sbjct 149675 CA 149676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507013126126320