Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq5 248 1e-60
seq2 172 8e-38
seq1 147 3e-30
seq3 138 2e-27
>seq5
Length=12318379
Score = 248 bits (274), Expect = 1e-60
Identities = 658/1001 (66%), Gaps = 72/1001 (7%)
Strand=Plus/Plus
Query 126723 ACCACGGGTCGTCACCGCAGGAGTACCGAGTCTGATGCCGCTTGGTCTGAGAGCGCTCTT 126782
||| || ||||||| || || |||||||| | ||||||| || |||| || |||
Sbjct 8902432 ACCGCGCGTCGTCAAGGCCGGCGTACCGAGCCGGATGCCGGACGGATTGAGCGCCGACTT 8902491
Query 126783 GTCTCCGGGTACTGTGTTTTTGTTGCAAGCGATTCTGCACAGTTCGAGGATGCGCTCTGC 126842
||| || ||||| ||||| |||||||| ||||| | ||||| ||| ||| ||
Sbjct 8902492 GTCACCCGGTACCGTGTTCTTGTTGCACGCGATCGAAATCTCCTCGAGAATGTACTCGGC 8902551
Query 126843 CGGTGCTCCTGCGAGTCCCACACTGCGCAAATCCACTAGAATCAGATGCACATCGGTACC 126902
| || || | || || || ||||| ||| || || | || ||||||||||||||
Sbjct 8902552 TCGCGCACCGGTGATGCCGACCGGGCGCAGATCGACCAGCACGAGGTGCACATCGGTACC 8902611
Query 126903 GCCAGTGGTGACGGTGTAGCCTCGTGAAACGAGTC-CCTCTGCCAACAA--CTGTGCATT 126959
||| || | || | |||||| | | |||| || ||| || | |||||||
Sbjct 8902612 GCCCGTCGCCACCGAGTAGCCC---GCATCGAGCAGCCCCTGGCAGAGGGCCCGTGCATT 8902668
Query 126960 TCGCACCACTCGTCTTTGGTAGAGTGCAAACTCTAGAGTGGTGGCCTGGTGCATTGCGGT 127019
|| | ||| | ||||| ||||| | || | ||||| ||||| |||
Sbjct 8902669 CCGGATCACCTGCTCCTGGTACGCCCGGAACTCGGGTGTCTTTGCCTGCTGCATGCAGGT 8902728
Query 127020 GGCGATCGCTGCAATCGTGTGATTGTGCGGTCCACCTTGCAGGCCAGGAAACACGGCTCG 127079
||||| | ||||||| |||||||||||| || || ||||| || || ||||| ||| |
Sbjct 8902729 AGCGATGCCAGCAATCGCGTGATTGTGCGGGCCGCCCTGCAGCCCCGGGAACACTGCTTG 8902788
Query 127080 TTC--------------AAT-----------TTC--------CTGCTCTA----GTGAT- 127101
| ||| ||| | ||| | | ||
Sbjct 8902789 GTTGACGCGCGACTCCAAATCGTATAGCACCTTCTCGCCGTTCGGCTTCACGCTGCGAAC 8902848
Query 127102 ----TTGCGGTAAAAGATGACTCCGGCTCGAGGACCTCTGAGAGTCTTGTGCGTTGTAGT 127157
|| ||| | |||||||| ||||| || || || | ||| |||||||| || || ||
Sbjct 8902849 GCCCTTACGGAAGAAGATGACACCGGCCCGGGGGCCCCGGAGTGTCTTGTGGGTCGTCGT 8902908
Query 127158 GGTCACAATGTCACAATACTCAAAGGGGCCAGGAATGACTTTGCCCGCAATCAAGCCCGC 127217
| | || | ||| ||||| || || || ||||| | |||| | | ||||||
Sbjct 8902909 GCTGACCACGTCCGCGTACTCGAACGGCGACGGGATGACACCGGCCGCGA-CGAGCCCGG 8902967
Query 127218 A-ATGTGTGCAATATCGGCCATCAGCAAGGAGCCGG-CTGCATCGGCAATCTCTCGGAAT 127275
| ||||| || |||||||| | ||| | | ||| ||| || |||||||| |||||
Sbjct 8902968 AGATGTGCGCCATATCGGCGAACAGGTACGCACCGTTCTGG-TCCGCAATCTCGCGGAAG 8903026
Query 127276 CGTCTATAGTCCAAGCGCCGAGGATAGCAACTGGTGCCGGCTATGATTAGCCTAGGTTTG 127335
||| | ||||| | || || | ||||| | ||||||| ||||| | | | || |||
Sbjct 8903027 CGTTTGTAGTCGAGGCAGCGCGAGTAGCACGAGATGCCGGCAATGATGACCTTCGGCTTG 8903086
Query 127336 AATAGATTGGCACTCTCGGCAAGTTTGGCATAGTCGACGAGTCCAGTCTGAGGATCCACC 127395
|| || || ||| | || ||| | || |||| || || ||||| | | ||||
Sbjct 8903087 AAGAGGCGAGCCGACTCCTCCAGCTTGTCGTAATCGATCAGACCGGTCTGGGCGTTCACC 8903146
Query 127396 TTGTACGGCATGCTTTCGAAAAAGAGTGATGTAGCGGACA-------CGTT-GCG----G 127443
|||||||||||||| ||||| |||| || || || || | |||| ||| |
Sbjct 8903147 TTGTACGGCATGCTCTCGAAGAAGATGGAGGTGGCAGAGATTTTCTTCGTTTGCGTCATG 8903206
Query 127444 AATCCGTGCGTCAGGTGGCCTCCGTCGGGCAGATCGAGTCCCATGATTCTACCGTGCGGT 127503
|| ||||||||||| ||||| ||||||||||| ||||| |||||||| | ||||||||
Sbjct 8903207 AAACCGTGCGTCAGATGGCCACCGTCGGGCAGGTCGAGGCCCATGATGCGCCCGTGCGGC 8903266
Query 127504 TTAACGATTCCAGTGTACACGGCAAAGTTGGCCATCGAGCCCGAGTACGGTTGTACACAC 127563
| | | | ||||| ||||| |||||||| |||||||||||| || || ||
Sbjct 8903267 TCGATCAGCGCCGTGTAGACGGCGAAGTTGGCTGGCGAGCCCGAGTAAGGCTGCACGTTG 8903326
Query 127564 ACTCCCCA----TTCGGACTCGTTCAAATTGAACGCTCTGAGACATCGCTGCTGTGCTAG 127619
||||| | |||| | ||| | |||| ||| ||| |||| || ||
Sbjct 8903327 CAGCCCCACTGCTCCGGA----TCCAACCGGTACGCCTCGAGCGCCCGCCGCTGGGCCAG 8903382
Query 127620 CAGTTCGATGCGATCGATAAACTCGTTACCACCATAGTATC 127660
||||||||| |||||| ||||||||||| || |||||||
Sbjct 8903383 CAGTTCGATCTCATCGATGAACTCGTTACCGCCGTAGTATC 8903423
>seq2
Length=51801758
Score = 172 bits (190), Expect = 8e-38
Identities = 396/588 (67%), Gaps = 14/588 (2%)
Strand=Plus/Plus
Query 49794 TTACCGTGGAGCCTCCCATGTTTCTATACATGATGGCCTTCATGACGACCACGGTCATCG 49853
|| |||| || || ||||||| || ||||||||||| |||||| ||| ||||| | |
Sbjct 5334263 TTTCCGTCGAACCGACCATGTTCCTGTACATGATGGCGTTCATGCTGACATCGGTCGTGG 5334322
Query 49854 AGCAGGCGTTTTACGTGTACCAAGCGTGCACCGTCAACCATGGCTACTCGCCAGAGGTGT 49913
|||| ||||| | | ||| |||| ||||| ||| | || || ||||||| || | |
Sbjct 5334323 AGCAAGCGTTCTTTCTCTACAAAGCCTGCACTGTCGATCACGGGTACTCGCATGATATCT 5334382
Query 49914 GCCACAACATTAGCCAGTACGATGACATCAACAACCGAGTCCAGCAGACTGTGTCTACAT 49973
| | |||||| |||||| | |||||||| || || ||| || || || |
Sbjct 5334383 GTCTCAACATCGAGCAGTACCAGGACATCAAGAAGGAGGTGCAGGTCACGACCTCCACCT 5334442
Query 49974 TTCATCAGTGGAACGGTGTAGCCAGTCATGTGGTGCCCTTTATATTGGCCTTTTTCCTAG 50033
|||||||||||||| | |||| | ||||||||| | | | || | || || |
Sbjct 5334443 TTCATCAGTGGAACAACATCGCCATGTACGTGGTGCCCATCTTTCTCGCAATGTTTCTCG 5334502
Query 50034 GATCCTATAGT--GATAGGCGCGGTAGAAAGATTGTACTCGTATGTGGACTCGTAGGTAA 50091
| | || | || || || | || | ||| || || || ||||| || ||
Sbjct 5334503 G-TGCT-TGGTCCGACCGGAGGGGCCGCAAGCTTCCGCTGGTGCTCGGACTGTGCGGAAA 5334560
Query 50092 ACTCTTTTTCTCGGCAATGCTAACCGTAAACAGTCTCAAGAGC---TGGCCCGTAGAGTA 50148
|| || | ||||| ||| || || |||| | | | | |||||||| |||||
Sbjct 5334561 GCTGTTCTACTCGGTCATGATAGTGGTGAACACGCGGATGCCCACGTGGCCCGTCGAGTA 5334620
Query 50149 TATAATCTACACGGCATCCTTTCCGAGTGCACTCACCGGAGCCGATTTGACCATATTCGC 50208
|| |||||||| || | | || || | || ||||| |||||| | | || || ||
Sbjct 5334621 CATTATCTACACCGCGACACTGCCCAGCGTGCTGACCGGTGCCGATATAGCGATCTTTGC 5334680
Query 50209 -AGCGTGCTTTGCCTACATTGCCGATGTGTCGACTGTGGAGAATCGCACGCTACGAGTGG 50267
||| ||||| || ||||| ||||| | |||| |||||| | |||||||| || |
Sbjct 5334681 TAGC-TGCTTCGCTTACATCTCCGATATCACGACGGTGGAGCAGCGCACGCTGCGTATAA 5334739
Query 50268 GCATCTTGGATGCCGTCTACCTGAGCACGATGCCAACCGGTGTGGCGATCGGTAGTGTGC 50327
|| ||||||| ||| |||||||||||||| | ||||||||| |||||| ||||
Sbjct 5334740 CGATTCTGGATGCGACCTATCTGAGCACGATGCCGATCGGTGTGGCACTCGGTAATGTGA 5334799
Query 50328 TGTGGAAGCGATTCCG----ATCCTACCCCATCATGTTTGCAATCAAT 50371
| | || | | ||| ||| ||| | |||||||| | ||||||
Sbjct 5334800 TCTTTAA-CCACACCGGCAAATCGTACACGATCATGTTCACCATCAAT 5334846
>seq1
Length=37976048
Score = 147 bits (162), Expect = 3e-30
Identities = 337/505 (67%), Gaps = 2/505 (0%)
Strand=Plus/Minus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| || || || || || || || | || | || ||||| || ||||| | |||
Sbjct 150244 CAGGGTGGTAACAAGCGACCTGGGGCATTTGCTATTTATTTGGAGCCATGGCATGGGGAT 150185
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
| ||||| ||| | || | || ||| | || ||||||| || || || |||
Sbjct 150184 ATATTTGAGTTTTTGGACCTTAAAAAGAACACGGGAAAAGAAGAGGTCCGCGCTAGAGAC 150125
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055
|||| || || || ||| | || |||||||||||| |||| ||| | | |
Sbjct 150124 ATGTTCTACGCTCTGTGGATTCCTGATTTGTTCATGCAGCGTGTCGAAGCAAACGAAATG 150065
Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115
||||| ||||||||||| || | || ||| |||| || ||||| || |||||
Sbjct 150064 TGGAGTTTAATGTGCCCCCACGATTGTCCTGGTTTGTCGGAGACATGGGGTGAGGAGTTC 150005
Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGCACGA 97175
| ||||| | |||||||| ||||| || | | | ||| || | || | |
Sbjct 150004 CAAAAACTCTACACTGGCTACGAGCGCGAGGGTCGTTTCACGCGACAGGTTAAGGCGCAA 149945
Query 97176 GAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTAC 97235
|| ||||| |||||| | | | ||||| ||||||||| || ||||| ||||||
Sbjct 149944 GATTTGTGGTTCGCCATCATAGAGTCGCAGGTTGAGACTGGAGTGCCTTACATGCTCTAC 149885
Query 97236 AAGGATACCGTG-AATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAA 97294
|| ||| |||| ||||| || || ||||||| || | || || |||||| | || ||
Sbjct 149884 AAAGAT-GCGTGCAATCGAAAGAGTAACCAACAAAACGTTGGAACGATCAAGTGTTCAAA 149826
Query 97295 TCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGC 97354
|||||||| |||||||| || ||| | || || || | || || || ||||||
Sbjct 149825 CCTGTGCACCGAAATTGTGGAATACTCTTCAAAAGATGAAATTGCTGTGTGTAATCTGGC 149766
Query 97355 ATCGGTCAATCTGCCCAAGTTTGTA 97379
||| || ||| || |||||||
Sbjct 149765 CTCGATCGCTCTAAACATGTTTGTA 149741
Score = 87.8 bits (96), Expect = 3e-12
Identities = 132/184 (72%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 134242 TCACAAATCAGTTGTGCGATGCGATCACCCTT--TGACACTACAAAGTCGTCATCGGAAT 134299
|| || || | ||| || || ||||| ||||| |||| || ||| ||| | ||| ||
Sbjct 946304 TCGCAGATGAATTGAGCAATACGATCGCCCTTCTTGAC-CTCGAAA-TCGGCCTCGCCAT 946361
Query 134300 GGTTAAAGAGGACCACTCCAATGTTTCCAGTATAGTCGCGGTCCACGACACCGGCTCCGA 134359
||||||| || || ||||| | |||||| || || |||||||||||| |||||||
Sbjct 946362 GGTTAAACAGCACAACTCCGACGTTTCCGCGGTAATCTTCGTCCACGACACCAGCTCCGA 946421
Query 134360 CGTCGATTCCGTACTTGGCTGCCAGTTTGGATCGCGGAGCAATCCTACCGTAGCAACCTT 134419
||||||| || || | || ||| ||| || || || | || |||||||| || |
Sbjct 946422 CGTCGATAAAGTTTTTCACCGCTAGTCCGGAACGAGGCGCCACCCGGCCGTAGCATCCCT 946481
Query 134420 CCGG 134423
||||
Sbjct 946482 CCGG 946485
>seq3
Length=33601328
Score = 138 bits (152), Expect = 2e-27
Identities = 231/331 (70%), Gaps = 11/331 (3%)
Strand=Plus/Plus
Query 125430 GTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGG 125489
||||| ||||| || || |||||||||||||| || || |||||||||||||| |||
Sbjct 22123330 GTGGCGTTCGCAGCTGTCGAGGGCATCTTCTTCAGCGGCAGCTTTGCGGCCATCTTCTGG 22123389
Query 125490 CTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGAC 125549
|| |||||||| || || ||||| || ||||| | || ||||| || || || ||
Sbjct 22123390 CTGAAGAAGCGTGGCCTGATGCCGGGTTTGACGTTCTCCAATGAGTTGATCTCGCGCGAT 22123449
Query 125550 GAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGC 125609
|| || | || || ||||||||| ||| |||| ||| |||||| | | ||
Sbjct 22123450 GAAGGTTTGCATTGCGACTTTGCCTGTCTCATGTT---CAAGTATCTG-ATACAGA---- 22123501
Query 125610 AGATCCAGCGATGAAAAG-GTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGA 125668
| ||| || || | || | ||||| | ||||| || || || || ||
Sbjct 22123502 --AGCCATCGCGCAAGCGTGTGACGGACATTATCCGGGATGCGGTTGCAATCGAGCAGGA 22123559
Query 125669 GTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGA 125728
||| || ||| || | || || ||| ||| | |||||||| ||| | || |||| | |
Sbjct 22123560 GTTCCTGACCAAAGCACTGCCAGTCGATATGTTGGGCATGAATTGCGAACTCATGTCCCA 22123619
Query 125729 GTACATAGAGTTTGTGGCAGATCGTCTACTG 125759
|||||| ||||||||||| ||||| || |||
Sbjct 22123620 GTACATCGAGTTTGTGGCGGATCGGCTGCTG 22123650
Score = 131 bits (144), Expect = 2e-25
Identities = 202/286 (71%), Gaps = 13/286 (5%)
Strand=Plus/Plus
Query 125038 AGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATT 125097
|||| | || || || ||||||||||||||||||||||| || |||||| || | || |
Sbjct 22122871 AGGCCGAAGCTTCTTTCTGGACGGTCGAAGAGGTCGATCTATCTAAGGACATGAAAGACT 22122930
Query 125098 GGGAGACTCGTTTGACTGAAACTGAGCGAGAGT----TTATATCGCACATTTTGGCCTTC 125153
|||| | | |||| | ||||||| || |||| ||||| | | ||||||
Sbjct 22122931 GGGATGCGC-------TGAAGCCGAGCGAGCGTCACTTTATCTCGCATGTGCTCGCCTTC 22122983
Query 125154 TTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTG 125213
||||||| ||||||||| ||||| ||||| |||||| | ||| ||| || ||| |
Sbjct 22122984 TTTGCCGCCTCCGATGGTATCGTGAACGAAAATCTGGTCGAACGGTTCAGCCAGGAGGTT 22123043
Query 125214 ACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTC 125272
| | |||| ||| || || || || ||||| ||| || || |||||||||
Sbjct 22123044 CAGGTGACGGAGG-CTCGCTGTTTCTATGGTTTCCAGATCGCTATGGAAAACGTGCACAG 22123102
Query 125273 GGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCGCAA 125318
|| |||||||| || || |||| |||||||| |||||| ||
Sbjct 22123103 CGAGATGTACTCGCTGCTTATCGACACATACATTCGGGATCCGAAA 22123148
Score = 113 bits (124), Expect = 7e-20
Identities = 233/347 (67%), Gaps = 0/347 (0%)
Strand=Plus/Minus
Query 70067 GGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGAC 70126
|| || ||||| ||||| || || ||||||||| | |||| || ||| ||| |
Sbjct 27418243 GGGGACCTGGGTCCAGTTTATGGGTTCCAGTGGCGCCACTTTGGAGCCACGTACGGCACG 27418184
Query 70127 TGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATCATTGACACTCTC 70186
||| | || || |||| ||||| ||||| || | |||||| |||| ||
Sbjct 27418183 TGCCACGATGATTACACGGGCAAGGGTAAAGATCAGCTGGCGGAAATCATCGACAAGCTG 27418124
Query 70187 AAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCAC 70246
|||| |||||| || ||| || ||||| | || || | ||||| || | ||| | | |
Sbjct 27418123 AAGAACAATCCCACCGATCGGCGGATCATCCTGAGCGCCTGGAACCCGGTGGATATTCCC 27418064
Query 70247 CAAATGGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTACGATGGCAAATTG 70306
||||| || || || || |||||||||| ||||||||| | | || | ||
Sbjct 27418063 ATTATGGCCCTTCCGCCCTGCCACTGTTTGGTGCAGTTTTACGTGGCAAACGGTGAGCTG 27418004
Query 70307 TCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCA 70366
|| ||| ||||| || | || || | || || || || || || ||||||||
Sbjct 27418003 TCCTGCCAGATGTACCAACGATCCGCAGATGTTGGGCTGGGCGTGCCATTCAACATTGCG 27417944
Query 70367 AGCTATTCTATGTTGACGCACATGATTGCTCACATTACCGGCCTGAA 70413
||||| || || ||||||||||||| || || | || || |||||
Sbjct 27417943 AGCTACTCGCTGCTGACGCACATGATCGCGCATGTAACGGGACTGAA 27417897
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741057338088760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |