Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq1 125 6e-24 >seq1 Length=37976048 Score = 125 bits (138), Expect = 6e-24 Identities = 134/177 (76%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 5320 TTCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTTCCGAA 5379 |||||| || | ||||| || | || |||||||| ||||| || ||| | || Sbjct 946303 TTCGCAGATGAATTGAGCAATACGATCGCCCTTCTTGACCTCGAAATCGGCCTCGCCATG 946362 Query 5380 GTTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCGCCCAC 5439 |||||||||||| || ||||| || || ||||| |||||||| | || ||||| || || Sbjct 946363 GTTAAACAGCACAACTCCGACGTTTCCGCGGTAATCTTCGTCCACGACACCAGCTCCGAC 946422 Query 5440 GTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGTAGCAACC 5496 ||||||||||| ||| ||||| || |||||||| || || | || |||||||| || Sbjct 946423 GTCGATAAAGTTTTTCACCGCTAGTCCGGAACGAGGCGCCACCCGGCCGTAGCATCC 946479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447749275027120