Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq1 176 4e-39 >seq1 Length=37976048 Score = 176 bits (194), Expect = 4e-39 Identities = 240/335 (72%), Gaps = 0/335 (0%) Strand=Plus/Plus Query 5503 GCCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCTTC 5562 |||||||||||| || || || | ||| | ||| |||||| || | | || ||||| Sbjct 946222 GCCCGTGGACCCAAACCCTCCCGAGCCGCGTTCGGTATCGGTAAGCGATGGCAATTCTTC 946281 Query 5563 CACATCGGGGAACGCAGCGCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTAC 5622 | ||||| | || |||||||| | || || || || |||||| |||| || Sbjct 946282 TAGCTCGGGATAAGCTATTTTTTCGCAGATGAATTGAGCAATACGATCGCCCTTCTTGAC 946341 Query 5623 CTCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGC 5682 |||||||||| | ||| ||| |||||||| || || ||||| |||||||| || | Sbjct 946342 CTCGAAATCGGCCTCGCCATGGTTAAACAGCACAACTCCGACGTTTCCGCGGTAATCTTC 946401 Query 5683 GTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGC 5742 ||| | || || || || |||||||| |||| || ||||| || ||||| || || || Sbjct 946402 GTCCACGACACCAGCTCCGACGTCGATAAAGTTTTTCACCGCTAGTCCGGAACGAGGCGC 946461 Query 5743 CACGCGGCCGTAGCACCCATCGGGAAGCTGTATCTGCAGGTCCGTGAACACCACTCGCCG 5802 ||| ||||||||||| || || |||| ||| | ||| | ||| || | |||| || Sbjct 946462 CACCCGGCCGTAGCATCCCTCCGGAACCTGCACCTGAATGTCGGTCATTACCAGCAGCTT 946521 Query 5803 ACCGCCCGCAGGGACGATGCAGTCGCAAGCGCTGC 5837 ||||| ||||| ||| || ||||| | ||||||| Sbjct 946522 ACCGCGGGCAGGAACGGTGTAGTCGTACGCGCTGC 946556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430053346501112