Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq1 176 4e-39
>seq1
Length=37976048
Score = 176 bits (194), Expect = 4e-39
Identities = 240/335 (72%), Gaps = 0/335 (0%)
Strand=Plus/Plus
Query 5503 GCCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCTTC 5562
|||||||||||| || || || | ||| | ||| |||||| || | | || |||||
Sbjct 946222 GCCCGTGGACCCAAACCCTCCCGAGCCGCGTTCGGTATCGGTAAGCGATGGCAATTCTTC 946281
Query 5563 CACATCGGGGAACGCAGCGCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTAC 5622
| ||||| | || |||||||| | || || || || |||||| |||| ||
Sbjct 946282 TAGCTCGGGATAAGCTATTTTTTCGCAGATGAATTGAGCAATACGATCGCCCTTCTTGAC 946341
Query 5623 CTCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGC 5682
|||||||||| | ||| ||| |||||||| || || ||||| |||||||| || |
Sbjct 946342 CTCGAAATCGGCCTCGCCATGGTTAAACAGCACAACTCCGACGTTTCCGCGGTAATCTTC 946401
Query 5683 GTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGC 5742
||| | || || || || |||||||| |||| || ||||| || ||||| || || ||
Sbjct 946402 GTCCACGACACCAGCTCCGACGTCGATAAAGTTTTTCACCGCTAGTCCGGAACGAGGCGC 946461
Query 5743 CACGCGGCCGTAGCACCCATCGGGAAGCTGTATCTGCAGGTCCGTGAACACCACTCGCCG 5802
||| ||||||||||| || || |||| ||| | ||| | ||| || | |||| ||
Sbjct 946462 CACCCGGCCGTAGCATCCCTCCGGAACCTGCACCTGAATGTCGGTCATTACCAGCAGCTT 946521
Query 5803 ACCGCCCGCAGGGACGATGCAGTCGCAAGCGCTGC 5837
||||| ||||| ||| || ||||| | |||||||
Sbjct 946522 ACCGCGGGCAGGAACGGTGTAGTCGTACGCGCTGC 946556
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430053346501112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |