Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 7e-17
seq2 86.0 5e-12
>seq1
Length=37976048
Score = 102 bits (112), Expect = 7e-17
Identities = 140/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGT 48593
|||||| || |||||||| || | || || || | |||||||||||||| ||| ||
Sbjct 36315751 CTCCTTCTGGATGTTGTAGTCCGA-AAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCGA 36315693
Query 48594 AAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAG 48653
| || | |||||||||||| || | | ||||||||| || ||| ||| | |
Sbjct 36315692 AGATCAGACGCTGCTGATCTGGGGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTCACAT 36315633
Query 48654 ACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCA 48713
| | ||||| || | | ||| ||||| ||| ||||| || |||||||| |||||||
Sbjct 36315632 TCTCGATGGTGTCCGATGGCTCGACCTCGAGTGTGATGGTCTTGCCGGTGAGCGTTTTCA 36315573
Query 48714 CAAAAATCTGCAT 48726
| |||||||||||
Sbjct 36315572 CGAAAATCTGCAT 36315560
Score = 98.7 bits (108), Expect = 8e-16
Identities = 146/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583
||||| || |||||| || |||||||| || | || || |||| |||||||||
Sbjct 21735285 TGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGTCCGTCTTCCAGCTGC 21735344
Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643
|| ||| || | || | ||||||||||||| ||| | | ||||||||| || ||
Sbjct 21735345 TTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGAATGCCCTCCTTGTCCTGGATCTTG 21735404
Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703
||| | | | | || ||||| | | ||| ||| | || ||||| ||||| |||
Sbjct 21735405 GCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTGATGGTCTTACCCGTG 21735464
Query 48704 AGAGTTTTCACAAAAATCTGCATCGTG 48730
|| ||||| || || ||||||||||||
Sbjct 21735465 AGGGTTTTGACGAAGATCTGCATCGTG 21735491
>seq2
Length=51801758
Score = 86.0 bits (94), Expect = 5e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594
|||||| || ||||| ||||| | || || |||||||||||||||| ||| || |
Sbjct 36664883 CTCCTTCTGGATGTTATAATCGGACAGGGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAA 36664824
Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654
|| |||||||||||||| || | | ||||||||| || || ||| |
Sbjct 36664823 GATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTT 36664764
Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714
| | |||||||| | || |||| ||| | || ||||| || || || | || |||||
Sbjct 36664763 CTCGATGGTATCCGAAGGCTCCACCTCCAGAGTGATGGTCTTGCCAGTCAAGGTCTTCAC 36664704
Query 48715 AAAAATCTGCAT 48726
|| ||||||||
Sbjct 36664703 GAAGATCTGCAT 36664692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421250168066201
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |