Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq3 145 7e-30 seq1 104 2e-17 >seq3 Length=33601328 Score = 145 bits (160), Expect = 7e-30 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 71670 AAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTC 71729 |||| || ||||| || ||||| | || |||| |||| | || || || || || | Sbjct 31446266 AAACCCACGATGACCTGTGGAACTCGGCCCAGCTACAGATGGTGAAGGAAGGCAAGATGC 31446207 Query 71730 ACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGC 71789 |||||| || |||||||||||||| || || || |||||||||||| || | || || Sbjct 31446206 ACGGATTTCTGCGCATGTACTGGGCGAAGAAAATCCTCGAGTGGACTAAATCGCCGGAAG 31446147 Query 71790 AGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTA 71849 ||||||||||| |||| || || |||||| | ||||| | ||||| |||||||| | Sbjct 31446146 AGGCGCTCGAGACCGCTATCTACCTCAACGATCGCTACAGCTTGGACGGGCGCGATCCGA 31446087 Query 71850 ACGGTTATGTCGGTTGCATGTGG 71872 |||| || || |||||||||||| Sbjct 31446086 ACGGGTACGTTGGTTGCATGTGG 31446064 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 119735 CTTGTCGTAGCCCAACTCGAACAACAGTCGATCTGCCACAAACTCGATGTATTCGCACAT 119794 ||| || |||||| ||| | || ||| ||||| ||||||||||||||||| | | |||| Sbjct 22123671 CTTCTCACAGCCCAGCTCCACCAGCAGCCGATCCGCCACAAACTCGATGTACTGGGACAT 22123612 Query 119795 GGATTGCGAATTCATGCCCAACATAGCGACCGGTAAAGCATTGGTAAAGAAATCCTTTTC 119854 | || ||||||||||||||||| |||| || | || ||||| | ||| |||| || Sbjct 22123611 GAGTTCGCAATTCATGCCCAACATATCGACTGGCAGTGCTTTGGTCAGGAACTCCTGCTC 22123552 Query 119855 AATGTCGACCGCTTC 119869 || | ||||| || Sbjct 22123551 GATTGCAACCGCATC 22123537 >seq1 Length=37976048 Score = 104 bits (114), Expect = 2e-17 Identities = 302/455 (66%), Gaps = 14/455 (3%) Strand=Plus/Plus Query 147449 ATGCTGATTGACCACTTGATACTCGCCCGACAGAACTCTTCGTACGTACAAATTACTAGT 147508 ||| ||||| ||||||||| | || || || || || || || ||| | || || Sbjct 149186 ATGATGATTCACCACTTGAAATTCTCCTGAGAGCACCCTACGGTTGTAGACGTTTGATGT 149245 Query 147509 AAACGGCTCGAACGACTCGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATGTA 147568 |||| ||||| ||||||||||| || || || || ||||||| || || ||||| Sbjct 149246 GTACGGTTCGAAAGACTCGTTGTTGCCGAGGATTTGGGCAGTCGAAGCGGTTGGCATAGG 149305 Query 147569 AGCAATCAATAATGAATTGCGTAAGCCGTGCATAGCCATTTCTCGCTTAAGCTCGTCCCA 147628 ||| | | | ||||| || || |||| | |||| |||| | |||||| || |||| Sbjct 149306 AGCTAGTAGCAGCGAATTACGCAAACCGTACGTAGCAATTTTTTTCTTAAGTTCAGCCCA 149365 Query 147629 GTTCCAAAGATCATTCGATTGG-TTAATATTCCACAAATCAAACTGTAAAAGTCCACAAC 147687 ||||| | |||| | || || | | ||||| ||| | || | || ||| | | Sbjct 149366 ATTCCACA----ATTCTGTGGGCTTCCTGTCCCACATATCGTATTGAAGAATTCCTCTGC 149421 Query 147688 TTGCAGGGCTTCCATCGTAAGAATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACTTT 147747 | | ||||||||||| || | ||||||| || | || ||| | ||| ||| Sbjct 149422 TAACCGGGCTTCCATCATATGTTTCGTATGGACCATCAAGCGCAGCCAACTCGCAGCTT- 149480 Query 147748 GACTT--AGTGCACCATAATAAATAGTTTCTGAAATCTTTTTATTTAA-ATCTCTAGCCT 147804 ||| ||||| || ||||||| ||||| | || | || |||||| | || || | Sbjct 149481 -GCTTCAAGTGCCCCGAAATAAATGGTTTCAAACATTTGTTGATTTAACAACT-GGGCTT 149538 Query 147805 CTTGGCTGTCGTAGGGCATATC-CAAAATGGCGAACGTATCCGCAAGTCCTTGAATACCG 147863 ||| || || || || || | || | | ||| | ||| || | ||||| | ||| Sbjct 149539 CTTCACTTTCATAAGG-ATGGCGCATCAAGATGAAAGCATCTGCCATGCCTTGCACTCCG 149597 Query 147864 ATACCGATGGGTCGGTGTCTGAAATTCGAT-GCTT 147897 ||||| || || ||||| | | ||| ||| |||| Sbjct 149598 ATACCTATCGGACGGTGGCGCATATTAGATCGCTT 149632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478661197360720