Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq3 145 7e-30
seq1 104 2e-17
>seq3
Length=33601328
Score = 145 bits (160), Expect = 7e-30
Identities = 154/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 71670 AAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTC 71729
|||| || ||||| || ||||| | || |||| |||| | || || || || || |
Sbjct 31446266 AAACCCACGATGACCTGTGGAACTCGGCCCAGCTACAGATGGTGAAGGAAGGCAAGATGC 31446207
Query 71730 ACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGC 71789
|||||| || |||||||||||||| || || || |||||||||||| || | || ||
Sbjct 31446206 ACGGATTTCTGCGCATGTACTGGGCGAAGAAAATCCTCGAGTGGACTAAATCGCCGGAAG 31446147
Query 71790 AGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTA 71849
||||||||||| |||| || || |||||| | ||||| | ||||| |||||||| |
Sbjct 31446146 AGGCGCTCGAGACCGCTATCTACCTCAACGATCGCTACAGCTTGGACGGGCGCGATCCGA 31446087
Query 71850 ACGGTTATGTCGGTTGCATGTGG 71872
|||| || || ||||||||||||
Sbjct 31446086 ACGGGTACGTTGGTTGCATGTGG 31446064
Score = 95.1 bits (104), Expect = 1e-14
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 119735 CTTGTCGTAGCCCAACTCGAACAACAGTCGATCTGCCACAAACTCGATGTATTCGCACAT 119794
||| || |||||| ||| | || ||| ||||| ||||||||||||||||| | | ||||
Sbjct 22123671 CTTCTCACAGCCCAGCTCCACCAGCAGCCGATCCGCCACAAACTCGATGTACTGGGACAT 22123612
Query 119795 GGATTGCGAATTCATGCCCAACATAGCGACCGGTAAAGCATTGGTAAAGAAATCCTTTTC 119854
| || ||||||||||||||||| |||| || | || ||||| | ||| |||| ||
Sbjct 22123611 GAGTTCGCAATTCATGCCCAACATATCGACTGGCAGTGCTTTGGTCAGGAACTCCTGCTC 22123552
Query 119855 AATGTCGACCGCTTC 119869
|| | ||||| ||
Sbjct 22123551 GATTGCAACCGCATC 22123537
>seq1
Length=37976048
Score = 104 bits (114), Expect = 2e-17
Identities = 302/455 (66%), Gaps = 14/455 (3%)
Strand=Plus/Plus
Query 147449 ATGCTGATTGACCACTTGATACTCGCCCGACAGAACTCTTCGTACGTACAAATTACTAGT 147508
||| ||||| ||||||||| | || || || || || || || ||| | || ||
Sbjct 149186 ATGATGATTCACCACTTGAAATTCTCCTGAGAGCACCCTACGGTTGTAGACGTTTGATGT 149245
Query 147509 AAACGGCTCGAACGACTCGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATGTA 147568
|||| ||||| ||||||||||| || || || || ||||||| || || |||||
Sbjct 149246 GTACGGTTCGAAAGACTCGTTGTTGCCGAGGATTTGGGCAGTCGAAGCGGTTGGCATAGG 149305
Query 147569 AGCAATCAATAATGAATTGCGTAAGCCGTGCATAGCCATTTCTCGCTTAAGCTCGTCCCA 147628
||| | | | ||||| || || |||| | |||| |||| | |||||| || ||||
Sbjct 149306 AGCTAGTAGCAGCGAATTACGCAAACCGTACGTAGCAATTTTTTTCTTAAGTTCAGCCCA 149365
Query 147629 GTTCCAAAGATCATTCGATTGG-TTAATATTCCACAAATCAAACTGTAAAAGTCCACAAC 147687
||||| | |||| | || || | | ||||| ||| | || | || ||| | |
Sbjct 149366 ATTCCACA----ATTCTGTGGGCTTCCTGTCCCACATATCGTATTGAAGAATTCCTCTGC 149421
Query 147688 TTGCAGGGCTTCCATCGTAAGAATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACTTT 147747
| | ||||||||||| || | ||||||| || | || ||| | ||| |||
Sbjct 149422 TAACCGGGCTTCCATCATATGTTTCGTATGGACCATCAAGCGCAGCCAACTCGCAGCTT- 149480
Query 147748 GACTT--AGTGCACCATAATAAATAGTTTCTGAAATCTTTTTATTTAA-ATCTCTAGCCT 147804
||| ||||| || ||||||| ||||| | || | || |||||| | || || |
Sbjct 149481 -GCTTCAAGTGCCCCGAAATAAATGGTTTCAAACATTTGTTGATTTAACAACT-GGGCTT 149538
Query 147805 CTTGGCTGTCGTAGGGCATATC-CAAAATGGCGAACGTATCCGCAAGTCCTTGAATACCG 147863
||| || || || || || | || | | ||| | ||| || | ||||| | |||
Sbjct 149539 CTTCACTTTCATAAGG-ATGGCGCATCAAGATGAAAGCATCTGCCATGCCTTGCACTCCG 149597
Query 147864 ATACCGATGGGTCGGTGTCTGAAATTCGAT-GCTT 147897
||||| || || ||||| | | ||| ||| ||||
Sbjct 149598 ATACCTATCGGACGGTGGCGCATATTAGATCGCTT 149632
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478661197360720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |