Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1 266 8e-66 >seq1 Length=37976048 Score = 266 bits (294), Expect = 8e-66 Identities = 705/1069 (66%), Gaps = 37/1069 (3%) Strand=Plus/Minus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 ||||| ||||| || || || ||| | |||||||||||||| || || ||| | | || Sbjct 150619 ATTGTAGAACGGCCACAACACATGCTCATGCGTGTTGCTATCGGCATACATGGTGCAGAC 150560 Query 363502 GTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACG 363561 ||||||| || ||||| || || || | || || || || ||||||||| || Sbjct 150559 ATTGATGCTGCAATTGAGACGTACAACTTGCTGTCTGAGCGATACTTTACGCACGCCTCG 150500 Query 363562 CCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAA 363621 ||||| |||| ||| | ||||| ||||| |||| || ||||| || || | | Sbjct 150499 CCAACCATGTTTGCTGCAGCAACTCAACGACCACAACTGTCGTCCTGCTTCCTGCTGACA 150440 Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||| ||||||| ||||||||| || | || || || || | ||||| | || || Sbjct 150439 ATGTCGGACGATAGCATCGAGGGAATTTACGATACTCTCAAACAGTGTGCATTGATCTCT 150380 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACA--GAACAGTTACA 363739 || || || || || ||| | | || | || | || | ||||| || | Sbjct 150379 AAATCGGCCGGTGGCATAGGTCTTAATGTGCATTGTATTAGAGCTAAAGGAACA--TATA 150322 Query 363740 TTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAAT 363798 | || || | || ||| || || ||| | || || ||||| ||||| | ||||| Sbjct 150321 TAGCAGGAACGAATGGTATA-TCCAACGGGTTAGTACCTATGCTGCGTGTCTACAACAAT 150263 Query 363799 ACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTC 363858 || ||| | ||||| ||||||||||| ||||| ||||| |||||||| ||| | Sbjct 150262 ACAGCGCGTTACGTGGACCAGGGTGGTAACAAGCGACCTGGGGCATTTGCTATTTATTTG 150203 Query 363859 GAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAG 363918 ||||| |||| ||||| ||||||||| | || || || |||||||||||||| Sbjct 150202 GAGCCATGGCATGGGGATATATTTGAGTTTTTGGACCTTAAAAAGAACACGGGAAAAGAA 150143 Query 363919 GAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGC 363978 || | || || | || ||||||| || || ||| || |||| || ||| |||| Sbjct 150142 GAGGTCCGCGCTAGAGACATGTTCTACGCTCTGTGGATTCCTGATTTGTTCATGCAGCGT 150083 Query 363979 GTGGAGGCAGGTAAGAATTGGTCACTCT--TTTGCCCACACGAATGTCCAGGTCTTTCCG 364036 || || ||| | ||| || | | | | ||||| ||||| ||||| ||| | || | Sbjct 150082 GTCGAAGCAA--ACGAAATGTGGAGTTTAATGTGCCCCCACGATTGTCCTGGTTTGTCGG 150025 Query 364037 ATGTATGGGGTGACGACTATGTTGC------TCTATACGAAAAGTATGAATCGGAGGGAA 364090 | ||||||||| || ||| | |||| || || | ||| | Sbjct 150024 AGACATGGGGTGAGGA----GTTCCAAAAACTCTACAC--------TGGCTACGAGCGCG 149977 Query 364091 AGGCTCGTAA-----GACAA-TTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGC 364144 ||| |||| |||| || || || | | ||||| |||||||| || |||| Sbjct 149976 AGGGTCGTTTCACGCGACAGGTTAAGGCGCAAGATTTGTGGTTCGCCATCATAGAGTCGC 149917 Query 364145 AGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACC 364204 || ||||||| ||| || || ||| | ||||||||| ||||||| || ||| |||| Sbjct 149916 AGGTTGAGACTGGAGTGCCTTACATGCTCTACAAAGATGCGTGCAATCGAAAGAGTAACC 149857 Query 364205 AGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCG 364264 | || || |||| || || || ||||| || ||||| ||| | |||||| | Sbjct 149856 AACAAAACGTTGGAACGATCAAGTGTTCAAACCTGTGCACCGAAATTGTGGAATACTCTT 149797 Query 364265 CTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAA- 364323 | || || | ||| || ||||| || || |||||||| || |||||||||| Sbjct 149796 CAAAAGATGAAATTGCTGTGTGTAATCTGGCCTCGATCGCTCTAAACATGTTTGTAAAAC 149737 Query 364324 --GATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATC 364381 ||| |||| | || | | | || | || ||| || | || |||| | |||| Sbjct 149736 CCGATCGTACATACGATTTCGCGAAGCTAAAGGAGGTAGCCAAAACTGTTACTCGGAATC 149677 Query 364382 TCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGC 364441 | |||| | ||||| | || || ||||| | || ||||| |||| |||||||||| Sbjct 149676 TGAACAAAATCATCGATATCAACTACTATCCTGTCCCGGAAGCAAAGCGATCTAATATGC 149617 Query 364442 GTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTAT 364490 | || || ||||| ||| | || || || ||| | || || | ||| || Sbjct 149616 GCCACCGTCCGATAGGTATCGGAGTGCAAGGCATGGCAGATGCTTTCAT 149568 Score = 147 bits (162), Expect = 6e-30 Identities = 282/411 (69%), Gaps = 6/411 (1%) Strand=Plus/Minus Query 364749 AGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACC 364808 ||| || ||||| || ||||| ||||| || |||||||| |||||||||| |||||||| Sbjct 149309 AGCTCCTATGCCAACCGCTTCGACTGCCCAAATCCTCGGCAACAACGAGTCTTTCGAACC 149250 Query 364809 GTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAA 364868 || ||| || | || || |||| || || |||||||||| || || ||| | Sbjct 149249 GTACACATCAAACGTCTACAACCGTAGGGTGCTCTCAGGAGAATTTCAAGTGGTGAATCA 149190 Query 364869 GTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATAT 364928 | | | |||||||| | || | ||| |||| ||| ||||| ||| | || Sbjct 149189 TCATTTGCTAAAGGATCTGACTGAGTTGGAGCTCTGGGATGATGAAATGAAAAACAAGAT 149130 Query 364929 CATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCC-TA 364987 | | ||| ||||| || | || || || | | |||| || | | | || | Sbjct 149129 CTTGGCCCACAATGGATCAATACAAAATATAGAGGAAATTCCGCAACACAT-ACGCAATC 149071 Query 364988 TTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCG 365047 | |||||||| || |||||||| || || |||| |||| | |||||||||||||| | Sbjct 149070 TGTACAAAACGGTCTGGGAAATATCAGTGAAAACTTGCATTAAAATGGCGGCCGATCGAG 149011 Query 365048 GTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGA--CTCAGCCAACCTCCGC 365105 | || ||||| ||| ||||| || || |||||| | || |||||| || || Sbjct 149010 GGGCATTTATTGATCAATCGCAGTCTTTCAA--TATTCACGTAGCTGAGCCAAACTACGG 148953 Query 365106 CAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 || || ||||| || ||||||||||| ||||| || ||||| ||||| Sbjct 148952 TAAACTAACATCAATTCATTTCTACGGCTGGAAGATGGGCCTTAAAACAGG 148902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303350243457182