Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq1 266 8e-66
>seq1
Length=37976048
Score = 266 bits (294), Expect = 8e-66
Identities = 705/1069 (66%), Gaps = 37/1069 (3%)
Strand=Plus/Minus
Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501
||||| ||||| || || || ||| | |||||||||||||| || || ||| | | ||
Sbjct 150619 ATTGTAGAACGGCCACAACACATGCTCATGCGTGTTGCTATCGGCATACATGGTGCAGAC 150560
Query 363502 GTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACG 363561
||||||| || ||||| || || || | || || || || ||||||||| ||
Sbjct 150559 ATTGATGCTGCAATTGAGACGTACAACTTGCTGTCTGAGCGATACTTTACGCACGCCTCG 150500
Query 363562 CCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAA 363621
||||| |||| ||| | ||||| ||||| |||| || ||||| || || | |
Sbjct 150499 CCAACCATGTTTGCTGCAGCAACTCAACGACCACAACTGTCGTCCTGCTTCCTGCTGACA 150440
Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681
||| ||||||| ||||||||| || | || || || || | ||||| | || ||
Sbjct 150439 ATGTCGGACGATAGCATCGAGGGAATTTACGATACTCTCAAACAGTGTGCATTGATCTCT 150380
Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACA--GAACAGTTACA 363739
|| || || || || ||| | | || | || | || | ||||| || |
Sbjct 150379 AAATCGGCCGGTGGCATAGGTCTTAATGTGCATTGTATTAGAGCTAAAGGAACA--TATA 150322
Query 363740 TTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAAT 363798
| || || | || ||| || || ||| | || || ||||| ||||| | |||||
Sbjct 150321 TAGCAGGAACGAATGGTATA-TCCAACGGGTTAGTACCTATGCTGCGTGTCTACAACAAT 150263
Query 363799 ACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTC 363858
|| ||| | ||||| ||||||||||| ||||| ||||| |||||||| ||| |
Sbjct 150262 ACAGCGCGTTACGTGGACCAGGGTGGTAACAAGCGACCTGGGGCATTTGCTATTTATTTG 150203
Query 363859 GAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAG 363918
||||| |||| ||||| ||||||||| | || || || ||||||||||||||
Sbjct 150202 GAGCCATGGCATGGGGATATATTTGAGTTTTTGGACCTTAAAAAGAACACGGGAAAAGAA 150143
Query 363919 GAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGC 363978
|| | || || | || ||||||| || || ||| || |||| || ||| ||||
Sbjct 150142 GAGGTCCGCGCTAGAGACATGTTCTACGCTCTGTGGATTCCTGATTTGTTCATGCAGCGT 150083
Query 363979 GTGGAGGCAGGTAAGAATTGGTCACTCT--TTTGCCCACACGAATGTCCAGGTCTTTCCG 364036
|| || ||| | ||| || | | | | ||||| ||||| ||||| ||| | || |
Sbjct 150082 GTCGAAGCAA--ACGAAATGTGGAGTTTAATGTGCCCCCACGATTGTCCTGGTTTGTCGG 150025
Query 364037 ATGTATGGGGTGACGACTATGTTGC------TCTATACGAAAAGTATGAATCGGAGGGAA 364090
| ||||||||| || ||| | |||| || || | ||| |
Sbjct 150024 AGACATGGGGTGAGGA----GTTCCAAAAACTCTACAC--------TGGCTACGAGCGCG 149977
Query 364091 AGGCTCGTAA-----GACAA-TTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGC 364144
||| |||| |||| || || || | | ||||| |||||||| || ||||
Sbjct 149976 AGGGTCGTTTCACGCGACAGGTTAAGGCGCAAGATTTGTGGTTCGCCATCATAGAGTCGC 149917
Query 364145 AGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACC 364204
|| ||||||| ||| || || ||| | ||||||||| ||||||| || ||| ||||
Sbjct 149916 AGGTTGAGACTGGAGTGCCTTACATGCTCTACAAAGATGCGTGCAATCGAAAGAGTAACC 149857
Query 364205 AGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCG 364264
| || || |||| || || || ||||| || ||||| ||| | |||||| |
Sbjct 149856 AACAAAACGTTGGAACGATCAAGTGTTCAAACCTGTGCACCGAAATTGTGGAATACTCTT 149797
Query 364265 CTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAA- 364323
| || || | ||| || ||||| || || |||||||| || ||||||||||
Sbjct 149796 CAAAAGATGAAATTGCTGTGTGTAATCTGGCCTCGATCGCTCTAAACATGTTTGTAAAAC 149737
Query 364324 --GATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATC 364381
||| |||| | || | | | || | || ||| || | || |||| | ||||
Sbjct 149736 CCGATCGTACATACGATTTCGCGAAGCTAAAGGAGGTAGCCAAAACTGTTACTCGGAATC 149677
Query 364382 TCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGC 364441
| |||| | ||||| | || || ||||| | || ||||| |||| ||||||||||
Sbjct 149676 TGAACAAAATCATCGATATCAACTACTATCCTGTCCCGGAAGCAAAGCGATCTAATATGC 149617
Query 364442 GTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTAT 364490
| || || ||||| ||| | || || || ||| | || || | ||| ||
Sbjct 149616 GCCACCGTCCGATAGGTATCGGAGTGCAAGGCATGGCAGATGCTTTCAT 149568
Score = 147 bits (162), Expect = 6e-30
Identities = 282/411 (69%), Gaps = 6/411 (1%)
Strand=Plus/Minus
Query 364749 AGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACC 364808
||| || ||||| || ||||| ||||| || |||||||| |||||||||| ||||||||
Sbjct 149309 AGCTCCTATGCCAACCGCTTCGACTGCCCAAATCCTCGGCAACAACGAGTCTTTCGAACC 149250
Query 364809 GTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAA 364868
|| ||| || | || || |||| || || |||||||||| || || ||| |
Sbjct 149249 GTACACATCAAACGTCTACAACCGTAGGGTGCTCTCAGGAGAATTTCAAGTGGTGAATCA 149190
Query 364869 GTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATAT 364928
| | | |||||||| | || | ||| |||| ||| ||||| ||| | ||
Sbjct 149189 TCATTTGCTAAAGGATCTGACTGAGTTGGAGCTCTGGGATGATGAAATGAAAAACAAGAT 149130
Query 364929 CATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCC-TA 364987
| | ||| ||||| || | || || || | | |||| || | | | || |
Sbjct 149129 CTTGGCCCACAATGGATCAATACAAAATATAGAGGAAATTCCGCAACACAT-ACGCAATC 149071
Query 364988 TTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCG 365047
| |||||||| || |||||||| || || |||| |||| | |||||||||||||| |
Sbjct 149070 TGTACAAAACGGTCTGGGAAATATCAGTGAAAACTTGCATTAAAATGGCGGCCGATCGAG 149011
Query 365048 GTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGA--CTCAGCCAACCTCCGC 365105
| || ||||| ||| ||||| || || |||||| | || |||||| || ||
Sbjct 149010 GGGCATTTATTGATCAATCGCAGTCTTTCAA--TATTCACGTAGCTGAGCCAAACTACGG 148953
Query 365106 CAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
|| || ||||| || ||||||||||| ||||| || ||||| |||||
Sbjct 148952 TAAACTAACATCAATTCATTTCTACGGCTGGAAGATGGGCCTTAAAACAGG 148902
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303350243457182
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |