Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1 154 1e-32 seq3 131 2e-25 seq2 125 7e-24 >seq1 Length=37976048 Score = 154 bits (170), Expect = 1e-32 Identities = 1104/1756 (63%), Gaps = 34/1756 (2%) Strand=Plus/Plus Query 144740 GCTGGCTTGGTGCGCAAATAGTACATGCCCGTTTTGAGTCCCGAGCGCCAAGTGTAGTCG 144799 || ||||| ||||| ||||| ||||| || ||||| || ||| ||| |||| Sbjct 148875 GCCGGCTTCGTGCGTAAATAATACATCCCTGTTTTAAGGCCCATCTTCCAGCCGTAGAAA 148934 Query 144800 TGTATCGACGTCATCAGAGCGTACGTGGGCTCCGCCACAAACAAATTTAGCGATTGGCTT 144859 || || || || | | |||| | ||||| || || | ||| | || || | Sbjct 148935 TGAATTGATGTTAGTTTACCGTAGTTTGGCTCAGCTACGTGAATATTGAAAGACTGCGAT 148994 Query 144860 TGATCAATGAAAGCGTTGCGGTCGGCGGCCATCTCAATCATACGTTTGCATTTC-ATTTC 144918 |||||||| || || || ||||| ||||| | ||| | |||| || | ||||| Sbjct 148995 TGATCAATAAATGCCCCTCGATCGGCCGCCATTTTAATGCAA-GTTTTCACTGATATTTC 149053 Query 144919 CCAAGCGGTCTTGTACAAA---CGTTTAATGTGGTCCGGAATGCCGTCAATCGCCTGAAT 144975 ||| | || ||||||| | ||| ||||| | |||||| | || || || || Sbjct 149054 CCAGACCGTTTTGTACAGATTGCGT---ATGTGTTGCGGAATTTCCTCTATATTTTGTAT 149110 Query 144976 CGACCCCTTGTGCGCAAATATGGCGTTCCGCATTTCGGACGTGTACAGTTTTAACTTGAT 145035 || || ||||| || || || ||| |||||| | || | |||| | Sbjct 149111 TGATCCATTGTGGGCCAAGATCTTGTTTTTCATTTCATCATCCCAGAGCTCCAACTCAGT 149170 Query 145036 CAAGTCGTCAATTAAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAA 145095 || || | | || | ||||| || || ||||| || || | | ||| | ||| Sbjct 149171 CAGATCCTTTAGCAAATGATGATTCACCACTTGAAATTCTCCTGAGAGCACCCTACGGTT 149230 Query 145096 ATACACGTTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGT 145155 || ||||| || ||| | ||||| ||||||||||| ||||| |||||||| || |||| Sbjct 149231 GTAGACGTTTGATGTGTACGGTTCGAAAGACTCGTTGTTGCCGAGGATTTGGGCAGTCGA 149290 Query 145156 TGCGGTGGGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTC 145215 ||||| ||||| || | | | ||||| |||| |||| | | || | || Sbjct 149291 AGCGGTTGGCATAGGAGCTAGTAGCAGCGAATTACGCAAACCGTACGTAGCAATTTTTTT 149350 Query 145216 CTTTAGCGTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAA 145275 ||| || | |||||| ||| | || ||| || ||||||||| ||||| || | Sbjct 149351 CTTAAGTTCAGCCCAATTCCACAATTCTGTGGGCTTCCTGTCCCACATATCGTATTGAAG 149410 Query 145276 AATGCCCTCGCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCC-CAAGTTTTGGCGA 145334 ||| || ||| | ||||| || | | | | ||| || |||| | | | Sbjct 149411 AATTCCTCTGCTAACCGGGCTTCCATCATATGTTTCGTATGGACCATCAAGCGCAGCCAA 149470 Query 145335 GCTCGCAACTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCA 145394 |||||| || || || || || ||||||||||| || || ||||| || | || Sbjct 149471 -CTCGCAGCTTGCTTCAAGTGCCCCGAAATAAATGGTTTCAAACATTTGTTGATTTAACA 149529 Query 145395 GCATCGCTTCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCT 145454 | ||||| || || || || || ||||| || | |||||||| || | || | Sbjct 149530 ACTGGGCTTCTTCACTTTCATAAGGATGGCGCATCAAGATGAAAGCATCTGCCATGCCTT 149589 Query 145455 GTATTCCCACGCCGATGGGCCGATGTTTCATGTT-GCTCATCCTCGCCGACTCGATAGGA 145513 | | ||| | || || || || || ||| || | || | | || | || |||| Sbjct 149590 GCACTCCGATACCTATCGGACGGTGGCGCATATTAGATCG-CTTTGCTTCCGGGACAGGA 149648 Query 145514 TATCGATTACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTA-ATGTGCCG 145572 || || ||||| ||||| |||| || || | || | |||| | | | Sbjct 149649 TAGTAGTTGATATCGATGATTTTGTTCAGATTCCG-AGTAACAGTTTTGGCTACCTCCTT 149707 Query 145573 CAACTTTTCAAAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGA 145632 | ||| | || || | | ||| || | ||| | | || |||||||| Sbjct 149708 TAGCTTCGCGAAATCGTATGTACGATCGGGTTTTACAA-ACATGTTTAGA--GCGATCGA 149764 Query 145633 CGCCAAATTACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAA 145692 |||| |||||| || || | || || ||||| || || |||| ||||| Sbjct 149765 GGCCAGATTACACACAGCAATTTCATCTTTTGAAGAGTATTCCACAATTTCGGTGCACAG 149824 Query 145693 ATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTT 145752 || ||| ||||| ||||| | ||||| || ||||| || | |||||||| || || Sbjct 149825 GTTTGAACACTTGATCGTTCCAACGTTTTGTTGGTTACTCTTTCGATTGCACGCATCTTT 149884 Query 145753 GTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGAT--AAAACGGTGCAAG 145810 |||||||||||| || | |||||||| ||||||| ||| | ||| ||| ||| Sbjct 149885 GTAGAGCATGTAAGGCACTCCAGTCTCAACCTGCGACTCTATGATGGCGAAC--CACAAA 149942 Query 145811 TCCTGCGCACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCC 145870 || ||||| ||||| || | | || ||||| ||||| ||||||| | Sbjct 149943 TCTTGCGCCTTAACCTGTCGCGTGAAACGACCCTCGCGCTCGTAGCCAGTGTAGAGTTTT 150002 Query 145871 TCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGAC 145930 | ||| | ||| | || |||| || ||||| | || ||| ||||| | | Sbjct 150003 TGGAACTCCTCACCCCATGTCTCCGACAAACCAGGACAATCGTGGGGGCACATTAAACTC 150062 Query 145931 CATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATC 145990 || | |||| || | ||| |||| ||| |||||||| || | |||||| ||||| | | Sbjct 150063 CACATTTCGTTTGCTTCGACACGCTGCATGAACAAATCAGGAATCCACAGAGCGTAGAAC 150122 Query 145991 AAGTCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACACT-ATA 146049 | ||| | || | || || ||| || ||| || || | | ||| | | Sbjct 150123 ATGTCTCTAGCGCGGACCTCTTCTTTTCCCGTG-TTCTTTTTAAGGTCCAAAAACTCAAA 150181 Query 146050 GATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTTG---CCACC 146106 || ||| | ||||| || || | ||| | || | || || ||| ||| ||||| Sbjct 150182 TATATCCCCATGCCATGGCTCCAAATAAATAGCAAATGCCCCAGGTCGCTTGTTACCACC 150241 Query 146107 CTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGC 146166 ||||||||||| ||| | | ||||| |||| |||| ||| || | | ||| ||| Sbjct 150242 CTGGTCCACGTAACGCGCTGTATTGTTGTAGACACGCAGCATAGGTACTAACCCGTTGGA 150301 Query 146167 TACGCCGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCC 146226 || || ||||| ||| || || | | | ||||| ||||| | || Sbjct 150302 TATACCATTCGTTCCTGCTATATATGTTCCTTTAGCTCTAATACAATGCACATTAAGACC 150361 Query 146227 GAGACCGCCGCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTC 146286 | || ||| | | || || || || || | ||| || ||||| || || || Sbjct 150362 TATGCCACCGGCCGATTTAGAGATCAATGCACACTGTTTGAGAGTATCGTAAATTCCCTC 150421 Query 146287 AATGCTATCGCTTCGA-ATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCG--GCGT 146343 ||||||||| | ||| || ||||| ||||| || ||| || | ||| | || Sbjct 150422 GATGCTATCG-TCCGACATTGTCAGCAGGAAGCAGGACGACAGTTGTG--GTCGTTGAGT 150478 Query 146344 CCCCGCCGAGAACAACGTCGGGCTCGCGTGCGTAAA-CATTTTTCGGCTCATCATCCGAT 146402 | || | |||| || || ||||||||||| || || | || || | Sbjct 150479 TGCTGCAGCAAACATGGTTGGCGAGGCGTGCGTAAAGTATCGCTCAG-ACAGCAAGTTGT 150537 Query 146403 ACGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCA 146462 |||| || || || | | |||||| | ||||| ||||| | ||| || |||||||||| Sbjct 150538 ACGTCTCAATTGCAGCATCAATGTCTGCACCATGTATGCCGATAGCAACACGCATGAGCA 150597 Query 146463 TGTGTTGGGGCCGCTC 146478 ||||||| ||||| || Sbjct 150598 TGTGTTGTGGCCGTTC 150613 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | |||||||| | || | ||||||||||| || |||||||| ||| | Sbjct 21735261 CCACCACGGAGGCGCAGCACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAC 21735320 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||| || ||||||||||| ||| |||| | ||||||||| ||||| || Sbjct 21735321 AGGGTACGTCCGTCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGA 21735380 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | ||| | ||||| | || ||||| Sbjct 21735381 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 21735440 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| ||||| || || ||||| ||||| |||||||| Sbjct 21735441 TCAAGGGTGATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 21735487 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| || | ||| | |||||||||||| || |||||||| || Sbjct 36315786 CCACCACGAAGTCGCAGTACAAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 36315727 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| ||||||||||| ||| |||| | ||||||||| || || ||| Sbjct 36315726 AGGGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGG 36315667 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| ||| ||| | | ||| | || || | | ||||| Sbjct 36315666 ATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATGGTGTCCGATGGCTCGACC 36315607 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || ||||| || ||||| |||||||||||||| Sbjct 36315606 TCGAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 36315560 >seq3 Length=33601328 Score = 131 bits (144), Expect = 2e-25 Identities = 263/387 (68%), Gaps = 5/387 (1%) Strand=Plus/Plus Query 46108 GACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGTATGGTGGCC 46167 |||||||||||||| |||||| |||| | || | | || ||||||||| ||||| Sbjct 22123276 GACTGGGCGATGAACTGGATCTCGAGCAAGAAGGCCAACTACGGCGAGCGTATCGTGGCG 22123335 Query 46168 TTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACATCAAA 46227 || || ||| |||||| |||| || ||||| ||||| |||||||| | | || Sbjct 22123336 TTCGCAGCTGTCGAGGGCATCTTCTTCAGCGGCAGCTTTGCGGCCATCTTCTGGCTGAAG 22123395 Query 46228 ACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGGGC 46287 | ||| | ||||| || ||||||| ||| ||| |||| |||||||| || || Sbjct 22123396 AAGCGTGGCCTGATGCCGGGTTTGACGTTCTCCAATGAGTTGATCTCGCGCGATGAAGGT 22123455 Query 46288 CTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACAAGCTTGCGCCC 46347 ||||| |||||||| |||||| | || || || | |||| ||| | Sbjct 22123456 TTGCATTGCGACTTTGCCTGTCTCATGTTCAAGTATC---TGATACAGAAGCCATCGCGC 22123512 Query 46348 GACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTACGGCC 46407 | ||| | ||| || ||| ||||| || || ||| ||||||| | || Sbjct 22123513 AAGCGTGTGACGGACATTATCCGGGATGCGGTTGCAATCGAGCAGGAGTTCCTGACCAAA 22123572 Query 46408 GCACTGCCCGCTGCCCTGCTGGGCATGAA-CGCACAGTCAATGTGCGACTACATCGAGTT 46466 |||||||| | | || |||||||||| || | || |||| | | ||||||||||| Sbjct 22123573 GCACTGCCAGTCGATATGTTGGGCATGAATTGCGAACTC-ATGTCCCAGTACATCGAGTT 22123631 Query 46467 TGTAGCGGACCGACTGCTCGTGCAGCT 46493 ||| ||||| || ||||| ||| |||| Sbjct 22123632 TGTGGCGGATCGGCTGCTGGTGGAGCT 22123658 >seq2 Length=51801758 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || || || | |||||||||||| || ||||| |||||| | Sbjct 36664918 CCACCACGCAGACGGAGGACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATAATCGGAC 36664859 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| ||||||||||| ||| |||| ||||||||||| || ||||| Sbjct 36664858 AGGGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGAGGA 36664799 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | ||| | ||||| | | ||| | Sbjct 36664798 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTATCCGAAGGCTCCACC 36664739 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || | || || ||||| |||||||| Sbjct 36664738 TCCAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 36664692 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || || || | || |||||||| || |||||||| ||| | Sbjct 21000377 CCACCACGCAGACGTAGGACCAAGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGGAC 21000436 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| |||||||| || ||| |||| | ||||||||| || || || Sbjct 21000437 AGCGTGCGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGGGGA 21000496 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| ||| | | ||| || | | ||| | ||||| | | ||||| Sbjct 21000497 ATGCCTTCCTTGTCC-TGAATCTTTGCCTTCACGTTCTCAATCGTATCCGATGGCTCGAC 21000555 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | ||| || || || || || || ||||||||||||||| Sbjct 21000556 CTCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCATG 21000604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472011614067840