Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 4e-15 seq1 93.3 5e-14 >seq2 Length=51801758 Score = 96.9 bits (106), Expect = 4e-15 Identities = 120/159 (75%), Gaps = 4/159 (3%) Strand=Plus/Plus Query 15042 TGCGCACGCCCGAGATTGGCGACAAGTTTTGCTCTGGT-ATGGCGCAAAAGGGCACGTGC 15100 |||||| || ||||||| ||||||||| ||| | | ||| || || ||||||||| Sbjct 48853899 TGCGCATCCCGCAGATTGGAGACAAGTTTGCTTCTCGCCACGGC-CAGAAAGGCACGTGC 48853957 Query 15101 GGCATGATTTTCCCCCAGGAAGACATGCCCTTTAC-CGCGTCAGGCATGACGCCCGACAT 15159 || || | || ||||| || ||||| || || ||| |||||| ||||| ||||| Sbjct 48853958 GGTATTCAGTACCGGCAGGAGGATATGCCGTTCACGTGCG-AAGGCATCACGCCGGACAT 48854016 Query 15160 TATCATCAACCCCAACTGCATCCCGTCCCGCATGACCAT 15198 |||||||||||| || ||| |||||||| |||||||| Sbjct 48854017 TATCATCAACCCGCACGCCATTCCGTCCCGTATGACCAT 48854055 >seq1 Length=37976048 Score = 93.3 bits (102), Expect = 5e-14 Identities = 142/200 (71%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 126179 TGGTGTAAATGTAGCGGGGAGCTGCCGAA-TCCTTGCCTCCCTCCAACCGCGTGCCAAAC 126237 ||||| | ||||| || || ||| || |||||||| ||| ||||||||| |||||| Sbjct 21028757 TGGTGAAGATGTAACGCGG-GCTAGCGCTGTCCTTGCCGCCCGTCAACCGCGTACCAAAC 21028815 Query 126238 TGACCGTCCGGCTCCAACAACTGCACATTGTTGGCTCCCACAAAGTCCTGCGCAAACTTG 126297 |||||| |||| | || || | | |||||| || ||||||| ||| || | ||| Sbjct 21028816 TGACCGCCCGGGTACAGCAGATTGATGTTGTTGCTGCCGACAAAGTTCTGGGCCAGATTG 21028875 Query 126298 ACAATGGTCTCGCACAGGTTCTGCTCGCCGTGCTTGTAGTCGGTCTGCTCGGCCACGTAG 126357 | ||||| |||||| ||||||||| || | ||| ||| | || ||||| | Sbjct 21028876 ATGATGGTGCTGCACAGCGACTGCTCGCCATGATGGTAAGCGGACATTTCCGCCACCGAA 21028935 Query 126358 CCGCTCAGCTGCGCAACCTT 126377 ||| |||||| || ||||| Sbjct 21028936 CCGGCCAGCTGGGCCACCTT 21028955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611390463877600