Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq3 158 1e-33
seq4 111 2e-19
seq5 102 9e-17
>seq3
Length=33601328
Score = 158 bits (174), Expect = 1e-33
Identities = 285/417 (68%), Gaps = 0/417 (0%)
Strand=Plus/Minus
Query 92926 ATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTAC 92985
||| || ||||| || |||||||| ||||| | || |||||||| || | | | ||
Sbjct 22123641 ATCCGCCACAAACTCGATGTACTGGGACATGAGTTCGCAATTCATGCCCAACATATCGAC 22123582
Query 92986 AGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTAT 93045
|| || || | ||||| ||| || | ||||||| |||| || || | || || |
Sbjct 22123581 TGGCAGTGCTTTGGTCAGGAACTCCTGCTCGATTGCAACCGCATCCCGGATAATGTCCGT 22123522
Query 93046 TACTCTACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAGTCGGT 93105
|| | | | ||| || |||| | ||| ||| |||| | || |||||||||
Sbjct 22123521 CACACGCTTGCGCGATGGCTTCTGTATCAGATACTTGAACATGAGACAGGCAAAGTCGCA 22123462
Query 93106 ATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCC 93165
||| |||||||| || || || |||||||||||| ||| || ||||| || | ||| ||
Sbjct 22123461 ATGCAAACCTTCATCGCGCGAGATCAACTCATTGGAGAACGTCAAACCCGGCATCAGGCC 22123402
Query 93166 TCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGC 93225
|| ||||| ||||| || || | ||||| || || || || || || || || ||
Sbjct 22123401 ACGCTTCTTCAGCCAGAAGATGGCCGCAAAGCTGCCGCTGAAGAAGATGCCCTCGACAGC 22123342
Query 93226 TGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGC 93285
||| || ||||| ||||| ||| | | || || || || |||||| || | ||
Sbjct 22123341 TGCGAACGCCACGATACGCTCGCCGTAGTTGGCCTTCTTGCTCGAGATCCAGTTCATCGC 22123282
Query 93286 CCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATC 93342
||| || || || ||| | ||| || || || ||||| || || || ||| ||||
Sbjct 22123281 CCAGTCCGCCTTACGCTTCACACACGGCAGCGTCTCGATGGCATTGAACAGGAAATC 22123225
Score = 127 bits (140), Expect = 2e-24
Identities = 199/282 (71%), Gaps = 2/282 (1%)
Strand=Plus/Minus
Query 93344 CGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACA 93403
|| || | || ||| || |||||||| ||||| | ||| || ||||| || || ||
Sbjct 22123153 CGTTCTTTCGGATCCCGAATGTATGTGTCGATAAGCAGCGAGTACATCTCGCTGTGCACG 22123094
Query 93404 TTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGA 93463
|| ||||| || || ||||| || |||||||| | ||| ||||| | ||| || || ||
Sbjct 22123093 TTTTCCATAGCGATCTGGAAACCATAGAAACAGCGAGCCTCCGTCACCTGAACCTCCTGG 22123034
Query 93464 GAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAAT 93523
|| | || || |||||||| || || ||||||||||| || ||||| || || |
Sbjct 22123033 CTGAACCGTTCGACCAGATTTTCGTTCACGATACCATCGGAGGCGGCAAAGAAGGCGAGC 22122974
Query 93524 ATATGCTTTATAAAATGTTTCTC-ATCATCTTTAAGCTTATCCCAATCGGATAGATCTTT 93582
| |||| ||||| || ||| || | || ||| |||||| || | || ||
Sbjct 22122973 ACATGCGAGATAAAGTGACGCTCGCTCGGC-TTCAGCGCATCCCAGTCTTTCATGTCCTT 22122915
Query 93583 TGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624
|| |||||||| |||||||| ||||| || || ||||| ||
Sbjct 22122914 AGATAGATCGACCTCTTCGACCGTCCAGAAAGAAGCTTCGGC 22122873
>seq4
Length=34682002
Score = 111 bits (122), Expect = 2e-19
Identities = 76/85 (89%), Gaps = 2/85 (2%)
Strand=Plus/Minus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
||||||| |||||||| |||||||||||||||||||||| |||||||||| ||||||
Sbjct 1023924 AGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTAAGGGAGC 1023865
Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347
||||||||||||||||| ||||||
Sbjct 1023864 GTGGGTTCGAACCCCACTTCTGACA 1023840
>seq5
Length=12318379
Score = 102 bits (112), Expect = 9e-17
Identities = 76/87 (87%), Gaps = 3/87 (3%)
Strand=Plus/Plus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAG--C 126322
||||||| |||||||||||| |||||||||||||||||| |||||||| | ||| |
Sbjct 6114072 AGTCAGGATGGCCGAGTGGT-TAAGGCGCCAGATTTAAGCTCTGGTTCTCGTAAGAGATC 6114130
Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349
||||||||||||||||| |||||||||
Sbjct 6114131 GTGGGTTCGAACCCCACTCCTGACAAA 6114157
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556859400887240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |