Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq1 210 2e-49
seq2 98.7 8e-16
>seq1
Length=37976048
Score = 210 bits (232), Expect = 2e-49
Identities = 1044/1640 (64%), Gaps = 28/1640 (2%)
Strand=Plus/Plus
Query 128775 CGACTTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACAT 128834
||| ||||| |||||||| | ||| || | | |||||||| ||||| ||||| |||||
Sbjct 148841 CGATTTGTCAACGGTAAACTGAATCGCATTAACAGCCGGCTTCGTGCGTAAATAATACAT 148900
Query 128835 GCCTGTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGT 128894
|||||||| | || | ||||| || | ||||| | || | ||||| |
Sbjct 148901 CCCTGTTTTAAGGCCCATCTTCCAGCCGTAGAAATGAATTGATGTTAGTTTACCGTAGTT 148960
Query 128895 GGGTTGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGC 128954
|| | | | |||||| || || || |||||||||||| | || ||||||||
Sbjct 148961 TGGCTCAGCTACGTGAATATTGAAAGACTGCGATTGATCAATAAATGCCCCTCGATCGGC 149020
Query 128955 AGCCATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTCAC 129014
||||| ||| || |||||||| |||||||| ||||||||||| || | | |
Sbjct 149021 CGCCATTTTAATGCAAGTTTTCACTGATATTTCCCAGACCGTTTTGTACAGATTGCGTAT 149080
Query 129015 GTGTTTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTTTCG 129074
||||| || ||||| || || || || | || |||| || | || ||||||
Sbjct 149081 GTGTTGCGGAATTTCCTCTATATTTTGTATTGATCCATTGTGGGCCAAGATCTTGTTTTT 149140
Query 129075 CATCTGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTTTATTAC 129134
||| | || | | | | || | ||| ||| | ||| | | || | ||
Sbjct 149141 CATTTCATCATCCCAGAGCTCCAACTCAGTCAGATCCTTTAGCAAATGATGATTCACCAC 149200
Query 129135 TTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAACGA 129194
|||||| || || | | || | || ||| | ||| ||| |||| || || ||
Sbjct 149201 TTGAAATTCTCCTGAGAGCACCCTACGGTTGTAGACGTTTGATGTGTACGGTTCGAAAGA 149260
Query 129195 TTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCACGCAAAGCGA 129254
|| |||||||| | ||||| || || | ||||| ||||| ||| | |||||
Sbjct 149261 CTCGTTGTTGCCGAGGATTTGGGCAGTCGAAGCGGTTGGCATAGGAGCTAGTAGCAGCGA 149320
Query 129255 GTTTCGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAGTCCCACATCGATGT 129314
|| |||||||||| | ||| | ||| || | || | ||| | ||||| |||
Sbjct 149321 ATTACGCAAACCGTACGTAGCAATTTTTTTCTTAAGTTCAGCCCAATTCCACAATTCTGT 149380
Query 129315 GGGTGTGTGATTCCACAAGTCGTATTGCAATATACCCAAACTGGCGGGACTGGAAAAGTA 129374
||| | | ||||| |||||||| | || || || | || || | ||
Sbjct 149381 GGGCTTCCTGTCCCACATATCGTATTGAAGAATTCCTCTGCTAACCGGGCTTCCATCATA 149440
Query 129375 GGAATCGTGCACGCCGT-AAGCTTTTGCCAATTCGCAACTCGCTTCCAATGCGCCAAAAT 129433
| |||| || | |||| ||||| ||||| || ||||| | ||| || ||||
Sbjct 149441 TGTTTCGTATGGACCATCAAGCGCA-GCCAACTCGCAGCTTGCTTCAAGTGCCCCGAAAT 149499
Query 129434 AAATTGTTTCGGCAATTTTGGTG-TTCAACACTTTGGCCTGGTCGCTTTCGTACGGCATA 129492
|||| ||||| |||| | || || |||| | ||| | || ||||| || ||
Sbjct 149500 AAATGGTTTCAAACATTT-GTTGATTTAACAACTGGGCTTCTTCACTTTCATAAGGATGG 149558
Query 129493 CGCAACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACCGATGGGTCGATGTTTT 129552
|||| || | || | || |||| ||||| | || | ||| || || || ||
Sbjct 149559 CGCATCAAGATGAAAGCATCTGCCATGCCTTGCACTCCGATACCTATCGGACGGTGGCGC 149618
Query 129553 CTATTGGATT--TTTG-TGCCGACAACAAGGGATAGTAGTTGATGTCTATAATTTTGTTT 129609
|||| ||| |||| | ||| | || |||||||||||||| || || ||||||||
Sbjct 149619 ATATTAGATCGCTTTGCTTCCGGGA-CA--GGATAGTAGTTGATATCGATGATTTTGTTC 149675
Query 129610 AAATTCTTGACCACAATTTTCGTTACGTATTTTAACATTTCAAAATTGTACTCGCCTAC- 129668
| |||| ||| |||| | ||| | |||| | | | |||| ||| |||
Sbjct 149676 AGATTCCGAGTAACAGTTTTGGCTACCTCCTTTAGCTTCGCGAAATCGTATG----TACG 149731
Query 129669 ATCGATGTCGACAAATTGATTGACACAAATCGAGGCCAAATTGCAGACGGCACTTTCGTT 129728
|||| | ||||| || | | |||||||||| ||| || || ||| |||| |
Sbjct 149732 ATCGGGTTTTACAAACATGTTTAGAGCGATCGAGGCCAGATTACACACAGCAATTTCATC 149791
Query 129729 TTTGTCACTGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCAAATG 129788
||| | ||| || |||||||||| ||||| || | || || || || | |
Sbjct 149792 TTTTGAAGAGTATTCCACAATTTCGGTGCACAGGTTTGAACACTTGATCGTTCCAACGTT 149851
Query 129789 CTTTTGATTACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTTTC 129848
| ||| ||||| || ||||| ||||||||||| | |||||| ||| || || ||
Sbjct 149852 TTGTTGGTTACTCTTTCGATTGCACGCATCTTTGTAGAGCATGTAAGGCACTCCAGTCTC 149911
Query 129849 GACTTGCGTTTCGACAATGGTCCTGAACAAGTCTCGAGCCTTGATCTGTCTTACAAATTT 129908
|| |||| || | |||| |||| ||| | ||||| | ||||| ||
Sbjct 149912 AACCTGCGACTCTATGATGGCGAACCACAAATCTTGCGCCTTAACCTGTCGCGTGAAACG 149971
Query 129909 GCCACATTTCTCGTATGCCACA-TACAGTTGTTCAAATTC-TGAGCCG-TGTACGGTGTC 129965
|| |||||| |||| || |||| || || || | | || ||| | | |
Sbjct 149972 ACCCTCGCGCTCGTA-GCCAGTGTAGAGTTTTTGGAACTCCTCACCCCATGT-CTCCGAC 150029
Query 129966 GAGCAACGGCGATTCACGCGGACACATCAAACTCCACATTCCATCCGCTTCGACTCGTTT 130025
| | | | | || | | || ||||| |||||||||||| | | |||||||| || |
Sbjct 150030 AAACCAGGACAAT-CGTGGGGGCACATTAAACTCCACATTTCGTTTGCTTCGACACGCTG 150088
Query 130026 CATAAACAAATCGGGTACCCACAGGGCGTACAACAAATCTC--GCGCTTTTCTATCCTCG 130083
||| |||||||| || | |||||| ||||| |||| |||| |||| | || ||
Sbjct 150089 CATGAACAAATCAGGAATCCACAGAGCGTAGAACATGTCTCTAGCGCGGACC--TCTTCT 150146
Query 130084 GCACCCATGTTACGTTTCAGTTCAAGGAAATCGTAAATGTCGGCGTGCCACGGTTCAACA 130143
||| |||| ||| || || | || || | || || | ||||| || || | |
Sbjct 150147 TTTCCCGTGTTCTTTTTAAGGTCCAAAAACTCAAATATATCCCCATGCCATGGCTCCAAA 150206
Query 130144 TAAATTGCCATTGCGCCCTTCCGTTTG---CCCCCTTGGTCAACGTGGCGCACGGCATTG 130200
||||| || | ||| || || ||| || || ||||| |||| ||| | | ||||
Sbjct 150207 TAAATAGCAAATGCCCCAGGTCGCTTGTTACCACCCTGGTCCACGTAACGCGCTGTATTG 150266
Query 130201 TTGTAGACTCGCAACATTGCCTCCAATCCGTTGGCCGTGCCGTTTGTGCTCTCAATGAAA 130260
|||||||| |||| ||| | | || ||||||| | || || || | | || |
Sbjct 150267 TTGTAGACACGCAGCATAGGTACTAACCCGTTGGATATACCATTCGTTCCTGCTATATAT 150326
Query 130261 CTGCCACGAGCCCGAACGTTATGAACGCTTAGACCTATGCCGCCGCCAAATTTTGATATC 130320
| || ||| | || ||| || | ||||||||||| ||| | |||| || |||
Sbjct 150327 GTTCCTTTAGCTCTAATACAATGCACATTAAGACCTATGCCACCGGCCGATTTAGAGATC 150386
Query 130321 AACGCGCAATCGCGTAGCGTTTCATAAATGCCAACGATACTGTCTTCTTTAATGTTTAGG 130380
|| || || | || || || ||||| || |||| || || || || | ||
Sbjct 150387 AATGCACACTGTTTGAGAGTATCGTAAATTCCCTCGATGCTATCGTCCGACATTGTCAGC 150446
Query 130381 AGGAAACACGAGGCCAATTG 130400
||||| || || | || |||
Sbjct 150447 AGGAAGCAGGACGACAGTTG 150466
Score = 111 bits (122), Expect = 1e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|| ||||| ||||| || ||||| | ||||| || || |||| || || || || |
Sbjct 36315557 AAAATGCAGATTTTCGTGAAAACGCTCACCGGCAAGACCATCACACTCGAGGTCGAGCCA 36315616
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| || ||| | || || | || || || || ||||||||||| || || || |||
Sbjct 36315617 TCGGACACCATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCCCCAGAT 36315676
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || ||||| || || |||||||| ||| | |||||| ||| ||| | || || |||
Sbjct 36315677 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTTTCGGACTAC 36315736
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| || || || || ||| | ||| | || ||||| | || || |||
Sbjct 36315737 AACATCCAGAAGGAGTCGACCCTGCATCTTGTACTGCGACTTCGTGGTGGT 36315787
Score = 100 bits (110), Expect = 2e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| || || || ||||| | || ||||| || |||| ||||| || || || |
Sbjct 21735488 GATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATCACCCTTGAGGTCGAGCCCTC 21735429
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
||||| | || || | || || || || ||||||||||| ||||| || |||||
Sbjct 21735428 GGATACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCGCCGGATCA 21735369
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|| ||||| || || |||||||| ||| | || || || ||| | ||||| |||||
Sbjct 21735368 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAAGACGGACGTACCCTGTCCGACTACAA 21735309
Query 22398 CATTCAAAAAGAATCCAC 22415
||| || || || || ||
Sbjct 21735308 CATCCAGAAGGAGTCGAC 21735291
>seq2
Length=51801758
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || || || || || || ||||||| || ||||| | |
Sbjct 36664692 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTGGAGCCTTCG 36664751
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | || | | || || || || ||||||||||| ||||| || |||||
Sbjct 36664752 GATACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCAGATCAG 36664811
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||| | || || |||||||| ||| | ||||| || ||| | |||||||| |||
Sbjct 36664812 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGTACCCTGTCCGATTATAAC 36664871
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || || || ||| | || || || | || |||| || ||
Sbjct 36664872 ATCCAGAAGGAGTCGACCCTGCACTTGGTCCTCCGTCTGCGTGGTGG 36664918
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419726971797565
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |