Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq2 102 2e-18 >seq2 Length=51801758 Score = 102 bits (112), Expect = 2e-18 Identities = 215/317 (68%), Gaps = 13/317 (4%) Strand=Plus/Minus Query 3169 CAAAACTCTTACGCCTACAAATACTTTGGCTGCGAGCTGCTAAACTTTGTCAACGTTGTC 3228 || |||| ||||||| | | |||| ||||||| |||| ||||| || ||||| || Sbjct 3603946 CACAACTTCTACGCCTTCCGGTTCTTTTTCTGCGAGGTGCTCAACTTCGTGAACGTGCTC 3603887 Query 3229 GCACAGATATGCTTCATGAATGCCTTTATAGGCGAAGACTTTTTGTTGTACGGAATCTAT 3288 | ||||| | ||||||| || ||| | | || || || | ||||| | | || Sbjct 3603886 GGTCAGATCTACTTCATGGATTTCTTCCTGGACGGCGAGTTCTCCACCTACGGCAGCGAT 3603827 Query 3289 GT--TACCTTCTTCAACCAG---GAAGCCGCCCATCCGAACATGACGAACCCCATGAAGC 3343 || | | || ||| | || ||| ||| || | | ||| || ||| || Sbjct 3603826 GTGGTGCGTT--TCACCGAGATGGAA-----CCAGAGGAGCGCGGCGATCCG-ATGGCGC 3603775 Query 3344 GAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGG 3403 | |||||||| | |||| ||||| || |||||||||||||| ||||| | || Sbjct 3603774 GCGTCTTTCCGAAGGTCACCAAGTGTACCTTCCACAAATACGGTCCATCGGGAAGCGTGC 3603715 Query 3404 AAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTT 3463 | || | ||| || |||||| | | ||| ||| | |||||||| ||||||||| | | Sbjct 3603714 AGAAGTTCGACGGTCTCTGCGTGTTACCGCTCAACATTGTCAACGAAAAGATCTACGTGT 3603655 Query 3464 TCCTCTGGTTCTGGTTC 3480 |||| |||||||||||| Sbjct 3603654 TCCTGTGGTTCTGGTTC 3603638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12479972563500