Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq2 111 1e-19
seq1 91.5 1e-13
>seq2
Length=51801758
Score = 111 bits (122), Expect = 1e-19
Identities = 168/239 (70%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 114145 ATTTACAAATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGT 114204
||| | | || || ||||| || | | || || || | |||||| || || || ||||
Sbjct 21000366 ATTAATACATTCCACCACGCAGACGTAGGACCAAGTGCAGCGTAGACTCCTTCTGGATGT 21000425
Query 114205 TGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTT 114264
|||| ||| || || ||| ||| || || || || |||||| |||| |||||||| |
Sbjct 21000426 TGTAGTCGGACAGCGTGCGACCATCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCT 21000485
Query 114265 GGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGG 114324
| || || ||||||||||| ||||| ||||||| || | | |||| || || |
Sbjct 21000486 GATCTGGGGGAATGCCTTCCTTGTCCTGAATCTTTGCCTTCACGTTCTCAATCGTATCCG 21000545
Query 114325 TGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
| ||||| |||| || | || || || ||||| || || || ||||||||||||
Sbjct 21000546 ATGGCTCGACCTCCAGAGTGATGGTCTTTCCTGTCAGGGTCTTCACGAAAATCTGCATG 21000604
>seq1
Length=37976048
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| ||||| || | || || | || | ||| || || || || |||||||| |||
Sbjct 21735260 ACCACCACGGAGGCGCAGCACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGA 21735319
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
|| ||||| ||||| || || || || ||| ||||||||||||| || ||||| ||
Sbjct 21735320 CAGGGTACGTCCGTCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGG 21735379
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
|||||| || ||||| ||||| || | | || | || || | || |||||
Sbjct 21735380 AATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTATCCGAGGGCTCGAC 21735439
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | ||| | || || || || || ||||| || || ||||||||
Sbjct 21735440 CTCAAGGGTGATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 21735487
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 114154 TACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGC 114213
|||| ||||| |||| || || | ||| | || || || || || |||||||| ||
Sbjct 36315788 TACCACCACGAAGTCGCAGTACAAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCG 36315729
Query 114214 TCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAG 114273
| ||||| ||| || || || || || ||| |||| |||||||| || || || |
Sbjct 36315728 AAAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGG 36315669
Query 114274 GAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGA 114333
| || || || ||||| ||||| || | | || | |||||| | | ||||
Sbjct 36315668 GGATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATGGTGTCCGATGGCTCGA 36315609
Query 114334 CGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
| || | || | || |||||||| || ||||| || |||||||||||
Sbjct 36315608 CCTCGAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 36315560
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420133370802012
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |