Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq3 113 4e-20 seq1 96.9 3e-15 >seq3 Length=33601328 Score = 113 bits (124), Expect = 4e-20 Identities = 198/284 (70%), Gaps = 6/284 (2%) Strand=Plus/Minus Query 37827 ACGCACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAGATGCAT 37886 || |||||| | |||||||| |||| || | ||| | ||| || || |||||||| Sbjct 31446264 ACCCACGATGACCTGTGGAACTCGGCCCAGCTACAGATGGTGAAGGAAGGCAAGATGCAC 31446205 Query 37887 CAGTATATGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCTCAGACC 37946 | | |||||||||| ||| |||||||| | || ||| || | || | || Sbjct 31446204 GGATTTCTGCGCATGTACTGGGCGAAGAAAATCCTCGAGTGGACTAA--ATCGCCGGAAG 31446147 Query 37947 --GCGCTCAACTACGCCATTTATCTCAATGATAAGTACAGCTTGGACGGGCGTGATCCCA 38004 |||||| | ||| || || ||||| ||| ||||||||||||||||| ||||| | Sbjct 31446146 AGGCGCTCGAGACCGCTATCTACCTCAACGATCGCTACAGCTTGGACGGGCGCGATCCGA 31446087 Query 38005 ACGGTTACGTCGGCTGTTTGTGGTCTATATGCGGGC-TACACGATAGAGCCTGGCGCGAG 38063 |||| ||||| || || ||||||| || || ||| | || ||| | ||| ||| Sbjct 31446086 ACGGGTACGTTGGTTGCATGTGGTCGAT-CGCTGGCATCCATGATCAGGGTTGGAAGGAG 31446028 Query 38064 ATTCCCATTTACGGCAAGATTCGGTACATGAACTACAACGGATG 38107 |||| ||||||||| || |||||||||||| | ||||| Sbjct 31446027 CGCGAAATTTTCGGCAAGATCCGCTACATGAACTACGAAGGATG 31445984 >seq1 Length=37976048 Score = 96.9 bits (106), Expect = 3e-15 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || ||||||||||| |||||||| ||||||||| |||||||| || | || || Sbjct 21735270 AGGCGCAGCACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGT 21735329 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 |||| |||| ||||||||||| || || || |||||||||||| ||| | || ||| Sbjct 21735330 CCGTCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGAATGCCCTCC 21735389 Query 34030 TTGTCC 34035 |||||| Sbjct 21735390 TTGTCC 21735395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397061427321202