Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1 127 5e-24 >seq1 Length=37976048 Score = 127 bits (140), Expect = 5e-24 Identities = 172/237 (73%), Gaps = 12/237 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || |||| ||||| ||||| | || || || ||||| || ||||| | Sbjct 36315786 CCACCACGAAGTCGCAGTACAAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 36315727 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || || || || || || | || || || ||||||||||||||||| || |||| Sbjct 36315726 AGGGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTG---ATCTGGG 36315670 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT--- 288420 |||||||| || || |||||||| ||||| ||||| || || || | || |||| Sbjct 36315669 GGGATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATGGTGTC---CGATGGC 36315613 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || || ||||| ||||| ||||| ||||| || || || ||||| ||||||||| || Sbjct 36315612 TCGACCTCGAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATTTTG 36315556 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || |||| ||| || || ||||| || ||||||| Sbjct 21735261 CCACCACGGAGGCGCAGCACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAC 21735320 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || ||||||||||| | || || || |||||||| |||||||| ||| || Sbjct 21735321 AGGGTACGTCCGTCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGA 21735380 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || || ||||| || || || | ||| | || || Sbjct 21735381 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 21735440 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || || || || |||||||| |||||||| Sbjct 21735441 TCAAGGGTGATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 21735487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179651362021278