Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1 107 2e-18 >seq1 Length=37976048 Score = 107 bits (118), Expect = 2e-18 Identities = 434/677 (64%), Gaps = 15/677 (2%) Strand=Plus/Plus Query 113954 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATG 114013 ||||| || || || |||| ||||| || | ||||||||| || || || || ||||| Sbjct 149244 GTGTACGGTTCGAAAGACTCGTTGTTGCCGAGGATTTGGGCAGTCGAAGCGGTTGGCATA 149303 Query 114014 GGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCC 114073 || || | || || ||||| | ||| | ||| || ||| || | || Sbjct 149304 GGAGCTAGTAGCAGCGAATTACGCAAACCGTACGTAGCAATTTTTTTCTTAAGTTCAGCC 149363 Query 114074 CAGT--CGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCT-TGG 114130 || | | | || | | | || || | ||||||||| | || || || ||| || Sbjct 149364 CAATTCCACAATTCTG--TGGGCTTCCTGTCCCACATATCGTATTGAAGAATTCCTCTGC 149421 Query 114131 GAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTC 114190 | | ||| ||| ||| |||| |||||||| || |||| | | ||||| ||| |||| Sbjct 149422 TAACCGGGCT-TCCATCATATGTTTCGTATGGACCATCAAGCGCAGCCAACTCGCAGCTT 149480 Query 114191 GCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCG 114250 || || || || || ||| || || ||||| || | ||| | || ||| || Sbjct 149481 GCTTCAAGTGCCCCGAAATAAATGGTTTCAAACATTTGTTGATTTAACAACTGGGCTTCT 149540 Query 114251 TCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 114310 || ||| | | | || ||| || || |||| || | ||||| || |||| Sbjct 149541 TCACTTTCATAAGGATGGCGCATCAAGATGAAAGCATCTGCCATGCCTTGCACTCCGATA 149600 Query 114311 CCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTC 114367 || || || || || | ||||||||| ||| | ||| || ||||| | || Sbjct 149601 CCTATCGGACGGTGGCGCATATTAGA---TCGCTTTGCTTCCGGGACAGGATAGTAGTTG 149657 Query 114368 CTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCG 114427 ||||||| | | || ||||| || ||| || | | || | ||||| || Sbjct 149658 ATATCGATGATTTTGTTCAGATTCCGAGTAACAGTTTTGGCTACCTCCTTTAGCTTCGCG 149717 Query 114428 TAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTA 114487 |||| | | ||| || || ||| || | || ||||| || ||||||||| Sbjct 149718 AAATCGTATGTACGA---TCGGGTTTTACAAACATGTTTAGAGCGATCGAGGCCAGATTA 149774 Query 114488 CACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTC 114547 ||||||| | ||||| || || ||| || | |||||| || |||| ||||||| | Sbjct 149775 CACACAGCAATTTCATCTTTTGAAGAGTATTCCACAATTTCGGTGCACAGGTTTGAACAC 149834 Query 114548 TTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATG 114607 || || || || | ||| | ||| || |||| || |||||||| ||||| |||||| Sbjct 149835 TTGATCGTTCCAACGTTTTGTTGGTTACTCTTTCGATTGCACGCATCTTTGTAGAGCATG 149894 Query 114608 TATGGCGTCCCCGTCTC 114624 || ||| || ||||| Sbjct 149895 TAAGGCACTCCAGTCTC 149911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352099149080