Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq3 95.1 1e-14
seq2 95.1 1e-14
seq4 87.8 2e-12
>seq3
Length=33601328
Score = 95.1 bits (104), Expect = 1e-14
Identities = 67/77 (87%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 57002 ATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 57061
||||||||| || | | |||||||||| ||||||||||||||||||||| ||||| ||
Sbjct 10193309 ATTTTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGAC 10193250
Query 57062 CACTATACTACCGAGGA 57078
|||||||||| ||||||
Sbjct 10193249 CACTATACTATCGAGGA 10193233
Score = 89.7 bits (98), Expect = 6e-13
Identities = 78/96 (81%), Gaps = 1/96 (1%)
Strand=Plus/Plus
Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063
|| |||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||
Sbjct 4940272 TTCCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCA 4940331
Query 57064 CTATACTACCGAGGA-TTGAATATATAACTTGAATA 57098
|||||||| |||||| ||| || || |||||||
Sbjct 4940332 CTATACTATCGAGGACTTGTGTAAGTAGATTGAATA 4940367
Score = 87.8 bits (96), Expect = 2e-12
Identities = 76/93 (82%), Gaps = 1/93 (1%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 4942511 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 4942452
Query 57067 TACTACCGAGGA-TTGAATATATAACTTGAATA 57098
||||| |||||| ||| || || |||||||
Sbjct 4942451 TACTATCGAGGACTTGCGTAAGTAGATTGAATA 4942419
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 9903783 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 9903842
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 9903843 TACTATCGAGGA 9903854
>seq2
Length=51801758
Score = 95.1 bits (104), Expect = 1e-14
Identities = 67/77 (87%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062
|||||||| || | | |||||||||| ||||||||||||||||||||| ||||| |||
Sbjct 9499167 TTTTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACC 9499226
Query 57063 ACTATACTACCGAGGAT 57079
||||||||| |||||||
Sbjct 9499227 ACTATACTATCGAGGAT 9499243
Score = 89.7 bits (98), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 9499597 TCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 9499538
Query 57066 ATACTACCGAGGAT 57079
|||||| |||||||
Sbjct 9499537 ATACTATCGAGGAT 9499524
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 19880245 CTCCCCGACGGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 19880304
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 19880305 TACTATCGAGGA 19880316
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 9499922 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 9499981
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 9499982 TACTATCGAGGA 9499993
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 9500525 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 9500584
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 9500585 TACTATCGAGGA 9500596
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 9501245 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 9501304
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 9501305 TACTATCGAGGA 9501316
Score = 86.0 bits (94), Expect = 7e-12
Identities = 66/77 (86%), Gaps = 1/77 (1%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 9501873 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 9501814
Query 57067 TACTACCGAGGA-TTGA 57082
||||| |||||| ||||
Sbjct 9501813 TACTATCGAGGACTTGA 9501797
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 19883274 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 19883215
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 19883214 TACTATCGAGGA 19883203
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 19884587 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 19884646
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 19884647 TACTATCGAGGA 19884658
>seq4
Length=34682002
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 20242061 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 20242002
Query 57067 TACTACCGAGGAT 57079
||||| |||||||
Sbjct 20242001 TACTATCGAGGAT 20241989
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543211435177840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |