Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1 149 6e-31 seq2 104 2e-17 >seq1 Length=37976048 Score = 149 bits (164), Expect = 6e-31 Identities = 863/1372 (63%), Gaps = 28/1372 (2%) Strand=Plus/Plus Query 154071 GTGAACGGCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATA 154130 ||| |||| ||||| || ||||||||||| | ||||| || || | || || |||||| Sbjct 149244 GTGTACGGTTCGAAAGACTCGTTGTTGCCGAGGATTTGGGCAGTCGAAGCGGTTGGCATA 149303 Query 154131 TACGCCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCAATTTTAAATCTGCC 154190 || | | || || || |||||||||| | ||||| || | || ||| Sbjct 149304 GGAGCTAGTAGCAGCGAATTACGCAAACCGTACGTAGCAATTTTTTTCTTAAGTTCAGCC 149363 Query 154191 CAATTCCACAAGTTGGTAGGTTGCACGTTCCACATGTCGTATTGCAAAACACCCAAACTC 154250 ||||||||||| | || || | | || |||||| |||||||| | || || || Sbjct 149364 CAATTCCACAATTCTGTGGGCTTCCTGTCCCACATATCGTATTGAAGAATTCCTCTGCTA 149423 Query 154251 GCCGGACTGTCACTATAACTAGAGTACGGCCCGTTCAGTTTTGCCAAGTCGCAACTGGCT 154310 |||| || || ||| | ||| || || | || ||||| ||||| || ||| Sbjct 149424 ACCGGGCTTCCATCATATGTTTCGTATGGACCATCAAGCGCAGCCAACTCGCAGCTTGCT 149483 Query 154311 TCTAACGCCGCATAGTATACGGTTTCGGCAATTTGTTTGTTTAACATTTTGGCTTTGTCA 154370 || | ||| | | || | |||||| ||||||| ||||||| | ||||| ||| Sbjct 149484 TCAAGTGCCCCGAAATAAATGGTTTCAAACATTTGTTGATTTAACAACTGGGCTTCTTCA 149543 Query 154371 CTTTCGTACGGCAATCCCAATATACAAAAAGCATCGGCGAGCCCTTGAATGCCCACTCCA 154430 ||||| || || | || | |||||||| || | ||||| | || | || Sbjct 149544 CTTTCATAAGGATGGCGCATCAAGATGAAAGCATCTGCCATGCCTTGCACTCCGATACCT 149603 Query 154431 ACGGGTCTGTGTTTTAAATTCGATTCTTTGGCAGCCTCCAGAGGATAATAATTGATATCG 154490 | || | ||| | ||| ||| || || || | |||||| || ||||||||| Sbjct 149604 ATCGGACGGTGGCGCATATTAGATCGCTTTGCTTCCGGGACAGGATAGTAGTTGATATCG 149663 Query 154491 ATAATTTTATTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA-TGCGACAAAATC 154549 || ||||| || | | || | ||||| Sbjct 149664 ATGATTTTGTTCAGATTCCGAGTAACAGTTTTGGCTACCTCCTTTAGCTTCG-CGAAATC 149722 Query 154550 AAAC--AC--TCCGCTTTTAATAAAACGATTTACACACACAGACGCCAAGTTGCAAACGG 154605 | || || | ||||| || | | |||| | | || |||| || || || | Sbjct 149723 GTATGTACGATCGGGTTTTACAAACATG-TTTAGAGCGATCGAGGCCAGATTACACACAG 149781 Query 154606 CAATTTCTTCAGAACTACTGTATTGCACAATTTCTGCGCACAAATTACTGCATCGAATGG 154665 ||||||| || | ||||| ||||||||| | ||||| || || || | Sbjct 149782 CAATTTCATCTTTTGAAGAGTATTCCACAATTTCGGTGCACAGGTTTGAACACTTGATCG 149841 Query 154666 TGCCCAGGTTTTTCTGATT-CGATTT-GATGTTGCATGCGTCTTTGTACAAAATGTACGG 154723 | || | ||||| || || | ||| ||| |||| || |||||||| | ||||| || Sbjct 149842 TTCCAACGTTTTGTTGGTTACTCTTTCGAT--TGCACGCATCTTTGTAGAGCATGTAAGG 149899 Query 154724 GGTGCCCGTTTCCACTTGGGTTTCAATAATTGTGCGAAACAGACTTC--GCGCCTCAACT 154781 || || || || || | || || || | |||| || | || |||||| ||| Sbjct 149900 CACTCCAGTCTCAACCTGCGACTCTATGATGG--CGAACCACAAATCTTGCGCCTTAACC 149957 Query 154782 TGACAAGTAAATCGATTTTCGCTCTCATATTGTTCGTACAGTTTTTCAAACTCTAAACTG 154841 || | || || ||| |||| ||| || ||| ||||||| ||||| || Sbjct 149958 TGTCGCGTGAAACGACCCTCGCGCTCGTAGCCAGTGTAGAGTTTTTGGAACTCCTCACCC 150017 Query 154842 TACACGTCCGACAAACCGGGACAGCGGTCGGGACACATCAATGACCACATTTCGTTTTGT 154901 | ||||||||||| ||||| || ||| ||||| || ||||||||||||| | Sbjct 150018 CATGTCTCCGACAAACCAGGACAATCGTGGGGGCACATTAAACTCCACATTTCGTTTGCT 150077 Query 154902 TGTACGCGTTTCATAAACAAATCCGGCACCCACAAAGCGTACAACAAATCACGCGCCTTT 154961 | || || | ||| |||||||| || | ||||| |||||| |||| || | || Sbjct 150078 TCGACACGCTGCATGAACAAATCAGGAATCCACAGAGCGTAGAACATGTCTCTAGCGCGG 150137 Query 154962 TTGTCTTCAGCGCCCATGTTTCGCTTTAA-ATTCAAAAAATCATATATGTCGGCGTGCCA 155020 ||||| ||| || ||| ||||| | |||||| ||| |||| || | ||||| Sbjct 150138 ACCTCTTCTTTTCCCGTG-TTCTTTTTAAGGTCCAAAAACTCAAATATATCCCCATGCCA 150196 Query 155021 CGGCTCTAAATATACGGCCATCGCGCC--TTTGCGT-TTTCCTCCTTGATCCACGTGACG 155077 ||||| ||||| | || | || || | || | || || || || ||||||| ||| Sbjct 150197 TGGCTCCAAATAAATAGCAAATGCCCCAGGTCGCTTGTTACCACCCTGGTCCACGTAACG 150256 Query 155078 CACACAATTATTGTACACGCGCAACAATGGTTCCACGCCGCTGGCCGTGCCGTTGGTGCC 155137 | | ||| ||||| || |||| || ||| | | ||| ||| | || || || || Sbjct 150257 CGCTGTATTGTTGTAGACACGCAGCATAGGTACTAACCCGTTGGATATACCATTCGTTCC 150316 Query 155138 ACGTATCGCGCTGCCGCGAGCACGCGCTTTATGAACATTAACGCCCAAACCTCCGCCGTA 155197 ||| | || ||| | ||| ||||||| || | || ||| | | Sbjct 150317 TGCTATATATGTTCCTTTAGCTCTAATACAATGCACATTAAGACCTATGCCACCGGCCGA 150376 Query 155198 TTTAGATAT--TTGCGCACAGTCCGCCAAAGTTTCGTACATTCCTTTGATGCTGTCTTCT 155255 |||||| || ||| ||| || | | ||| ||||| ||||| | |||||| || || Sbjct 150377 TTTAGAGATCAATGCACACTGTTTG--AGAGTATCGTAAATTCCCTCGATGCTATCGTCC 150434 Query 155256 TTCAACGTCAACAAGAAACACGAAGATAATTGAGGTTGAGGGCAGCCGGCCGCAAATAAT 155315 || |||| || ||| || || || | ||| ||| | | | || ||||| | Sbjct 150435 GACATTGTCAGCAGGAAGCAGGACGACAGTTGTGGTCGTTGAGTTGCTGCAGCAAACATG 150494 Query 155316 GTAGGACTAGCGTGTGTAAACATTTTGTT--GGCGGTTAAGTTGTAAGTTTCGATGGCGG 155373 || || ||||| ||||| | | | | | | | |||||||| || || || || | Sbjct 150495 GTTGGCGAGGCGTGCGTAAA-GTATCGCTCAGACAG-CAAGTTGTACGTCTCAATTGCAG 150552 Query 155374 CGTCAATGTCACGACCGTGTATACCGATCGCCACGCGCATCAGCATGTGTTG 155425 | |||||||| ||| ||||| ||||| || || ||||| ||||||||||| Sbjct 150553 CATCAATGTCTGCACCATGTATGCCGATAGCAACACGCATGAGCATGTGTTG 150604 Score = 116 bits (128), Expect = 4e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| || |||| |||||| || || || |||||||| || | | ||| || ||||| Sbjct 21735276 AGCACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGTCCGTCT 21735335 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||||||||| | ||||| |||||||| || || ||||| || || || || Sbjct 21735336 TCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGAATGCCCTCCTTGTCC 21735395 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| ||| | ||||| || || || || | || | |||| Sbjct 21735396 TGGATCTTGGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTGATGGTC 21735455 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || | ||||| ||||| || ||||| Sbjct 21735456 TTACCCGTGAGGGTTTTGACGAAGATCTGCAT 21735487 Score = 105 bits (116), Expect = 7e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | || || || ||||| | ||||| || || || |||||||| || | Sbjct 36315787 ACCACCACGAAGTCGCAGTACAAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 36315728 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| || | || || |||||||||||||| | || || |||||||| || || || Sbjct 36315727 AAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGG 36315668 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||||| || || || || || || ||| ||| ||| | || || | || || Sbjct 36315667 GATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATGGTGTCCGATGGCTCGAC 36315608 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | || | |||||||||||| | ||||| |||||||| |||||||| Sbjct 36315607 CTCGAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATTTT 36315557 >seq2 Length=51801758 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || || ||||| ||||| | | ||| || |||| || |||||||||||| Sbjct 36664888 GTCGACTCCTTCTGGATGTTATAATCGGACAGGGTACGTCCGTCCTCCAGCTGCTTGCCG 36664829 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || | |||||||| || |||||||| || || || || || || || ||| Sbjct 36664828 GCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTC 36664769 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | ||||| | ||||| || | ||| | ||||||||| ||||| || Sbjct 36664768 ACGTTCTCGATGGTATCCGAAGGCTCCACCTCCAGAGTGATGGTCTTGCCAGTCAAGGTC 36664709 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 36664708 TTCACGAAGATCTGCAT 36664692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499643544642440