Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 1e-14 >seq1 Length=37976048 Score = 95.1 bits (104), Expect = 1e-14 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 95093 CGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGT 95152 ||||||| | || || ||||| || || || || || || ||||| ||||||||||||| Sbjct 149319 CGCTGCTACTAGCTCCTATGCCAACCGCTTCGACTGCCCAAATCCTCGGCAACAACGAGT 149260 Query 95153 CGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATT 95207 | |||||||| | ||| || ||||| |||||| | |||||||| | || ||||| Sbjct 149259 CTTTCGAACCGTACACATCAAACGTCTACAACCGTAGGGTGCTCTCAGGAGAATT 149205 Score = 93.3 bits (102), Expect = 4e-14 Identities = 453/715 (63%), Gaps = 8/715 (1%) Strand=Plus/Minus Query 93928 CCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTC 93987 ||||| |||| || || |||||| |||| | || ||| |||| ||||||| | Sbjct 150469 CCACAACTGTCGTCCTGCTTCCTGCTGACAATGTCGGACGATAGCATCGAGGGAATTTAC 150410 Query 93988 GACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTC 94047 || | ||||| | ||||| ||||| |||| || || || || || | | ||| Sbjct 150409 GATACTCTCAAACAGTGTGCATTGATCTCTAAATCGGCCGGTGGCATAGGTCTTAATGTG 150350 Query 94048 CACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTC 94107 || | | || | || | || || || || ||||| | |||||||| | Sbjct 150349 CATTGTATTAGAGCTAAAGGAACATATATAGCAGGAACGAATGGTATATCCAACGGGTTA 150290 Query 94108 GTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGG 94167 || |||||||| || |||| |||||| | ||||| |||||||||||||||||| | | Sbjct 150289 GTACCTATGCTGCGTGTCTACAACAATACAGCGCGTTACGTGGACCAGGGTGGTAACAAG 150230 Query 94168 AGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATC 94227 | || | || || | ||| | ||||| ||||| | ||| | | || | Sbjct 150229 CGACCTGGGGCATTTGCTATTTATTTGGAGCCATGGCATGGGGATATATTTGAGTTTTTG 150170 Query 94228 GACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTC 94287 ||||| ||||||| || || || || | || |||||| | ||||||||||| Sbjct 150169 GACCTTAAAAAGAACACGGGAAAAGAAGAGGTCCGCGCTAGAGACATGTTCTACGCTCTG 150110 Query 94288 TGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGT 94347 ||| | || || | || ||| | || ||||| |||| |||||| | | || Sbjct 150109 TGGATTCCTGATTTGTTCATGCAGCGTGTCGAAGCAAACGAAATGTGGAGTTTAATGTGC 150050 Query 94348 CCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCT 94407 ||| | || ||||| || |||| || || || | || || | | || || Sbjct 150049 CCCCACGATTGTCCTGGTTTGTCGGAGACATGGGGTGAGGAGTTCCAAAAACTCTACACT 149990 Query 94408 CGTTACGAATCGC-AGGGCAAGGCCA---GGAAGGTTATGGATGCTAGGAAGCTGTGGGA 94463 | |||| | ||| |||| || | |||||| || || || | ||||| Sbjct 149989 GGCTACG-AGCGCGAGGGTCGTTTCACGCGACAGGTTAAGG-CGCAAG--ATTTGTGGTT 149934 Query 94464 TCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGT 94523 ||| | || ||||| ||||| || ||| ||||| | | ||| || | Sbjct 149933 CGCCATCATAGAGTCGCAGGTTGAGACTGGAGTGCCTTACATGCTCTACAAAGATGCGTG 149874 Query 94524 CAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGA 94583 ||| ||| ||||| || || | || ||||||| | || || ||||||||||| Sbjct 149873 CAATCGAAAGAGTAACCAACAAAACGTTGGAACGATCAAGTGTTCAAACCTGTGCACCGA 149814 Query 94584 GATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATC 94638 ||||| || || |||| || || |||||||||||||| |||| ||| ||| Sbjct 149813 AATTGTGGAATACTCTTCAAAAGATGAAATTGCTGTGTGTAATCTGGCCTCGATC 149759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494721957007960