Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq2 113 3e-20 >seq2 Length=51801758 Score = 113 bits (124), Expect = 3e-20 Identities = 174/246 (71%), Gaps = 2/246 (1%) Strand=Plus/Plus Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399 ||||| || || || || |||||||| || ||| ||||| ||| | ||||||||| Sbjct 40156446 GCCGGCTTTGGGGTAACTGCCGGCGTTCACCGGCTGTGGTGCCATCGCTCGTACAAGGCC 40156505 Query 108400 ACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATC 108459 | ||||| | | ||||| | |||| |||| | || || || ||||| ||| Sbjct 40156506 AAGCTGCCGTTGCGCATCATCCTGATGTGCTGCTACTCGATCGCGGGCCAAAACACGATC 40156565 Query 108460 CCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACAC-GACGGCCGACCC 108518 | ||||| | |||||| | | |||||||||||||| || || ||||| || || Sbjct 40156566 TACGACTGGGTCCGGGATCACCGCATCCACCACAAGTACTCGGAAACGGACGG-TGATCC 40156624 Query 108519 ACACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGA 108578 ||||||||| ||| |||| ||| || | ||||||| || ||||| ||| | |||| | Sbjct 40156625 ACACAACGCGAACCGGGGCTTCCTGTACGCGCACGTTGGCTGGCTGATGCTCCGCAAGCA 40156684 Query 108579 CCCCGA 108584 |||||| Sbjct 40156685 CCCCGA 40156690 Score = 93.3 bits (102), Expect = 3e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 108883 GCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCC 108942 ||| | ||||| ||||||||||||||||||||||||||||| | ||||||||||| ||| Sbjct 40158269 GCTATGGGCGAAGGATGGCACAACTACCACCACGTGTTCCCGTGGGACTACAAGGCGGCC 40158328 Query 108943 GAGTTGGGGAACGACT 108958 ||| |||| ||| ||| Sbjct 40158329 GAGCTGGGCAACTACT 40158344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381771864775944