Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq3 159 3e-34
seq1 82.4 8e-11
>seq3
Length=33601328
Score = 159 bits (176), Expect = 3e-34
Identities = 303/439 (69%), Gaps = 13/439 (3%)
Strand=Plus/Plus
Query 52305 CTGCTGAATGCGTTCGAGCACG-TGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAA 52363
||| | ||||| ||||| ||| ||||||| || ||||| | ||||| |||||
Sbjct 22123231 CTGTTCAATGCCATCGAG-ACGCTGCCGTGTGTGAAGCGTAAGGCGGACTGGGCGATGAA 22123289
Query 52364 GTGGATCGAGAGCGACACCGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGA 52423
|||||| |||| | | |||| | |||||| || ||||| ||||| |||||
Sbjct 22123290 CTGGATCTCGAGCAAGAAGGCCAACTACGGCGAGCGTATCGTGGCGTTCGCAGCTGTCGA 22123349
Query 52424 GGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAAT 52483
|||| | || || |||||||||||| |||||||| | | || | | ||| | ||
Sbjct 22123350 GGGCATCTTCTTCAGCGGCAGCTTTGCGGCCATCTTCTGGCTGAAGAAGCGTGGCCTGAT 22123409
Query 52484 GCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTT 52543
||| || |||||||| ||| |||||||| |||||||| ||||| |||| |||||
Sbjct 22123410 GCCGGGTTTGACGTTCTCCAATGAGTTGATCTCGCGCGATGAAGGTTTGCATTGCGACTT 22123469
Query 52544 TGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGA- 52602
||| || ||| | |||| | | || ||| | ||| || | |||
Sbjct 22123470 TGCCTGTCTCATGTTCAAGTATC-TGATACAGAA-----GCCATCGCGCAAGCGTGTGAC 22123523
Query 52603 --GCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGT 52660
||| || ||| ||||| || ||||| ||||||| | || || ||||| ||
Sbjct 22123524 GGACATTATCCGGGATGCGGTTGCAATCGAGCAGGAGTTCCTGACCAAAGCACTGCCAGT 22123583
Query 52661 CGAGCTGCTGGGCATGAA-CGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATC 52719
||| || |||||||||| ||| | | ||||| | ||||||||||||||||||||||||
Sbjct 22123584 CGATATGTTGGGCATGAATTGCGAACT-CATGTCCCAGTACATCGAGTTTGTGGCGGATC 22123642
Query 52720 GTCTGTTGGTGCAGCTCGG 52738
| ||| ||||| |||| ||
Sbjct 22123643 GGCTGCTGGTGGAGCTGGG 22123661
>seq1
Length=37976048
Score = 82.4 bits (90), Expect = 8e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459
|||| || | ||| | | | |||||||| || ||||||||||| | |||||
Sbjct 36315774 CGCAGTACAAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCA 36315715
Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519
||||| || || || |||| |||| |||||||| || || || || || || || |||
Sbjct 36315714 TCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATTCCCTCCTTG 36315655
Query 138520 TCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGC 138579
|| ||| || || | | || | |||||| | | ||| ||||||| || |
Sbjct 36315654 TCCTGGATCTTCGCCTTCACATTCTCGATGGTGTCCGATGGCTCGACCTCGAGTGTGATG 36315595
Query 138580 GTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| || || || || ||||| || |||||||||||
Sbjct 36315594 GTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 36315560
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496261153140720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |