Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1 107 2e-18 >seq1 Length=37976048 Score = 107 bits (118), Expect = 2e-18 Identities = 441/689 (64%), Gaps = 15/689 (2%) Strand=Plus/Plus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 |||| ||| | ||||| || || || |||| ||||| || | ||||||||| || || Sbjct 149232 TAGACGTTTGATGTGTACGGTTCGAAAGACTCGTTGTTGCCGAGGATTTGGGCAGTCGAA 149291 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022 || || ||||| || || | || || || || | ||| | ||| || | Sbjct 149292 GCGGTTGGCATAGGAGCTAGTAGCAGCGAATTACGCAAACCGTACGTAGCAATTTTTTTC 149351 Query 116023 TTGAGGGCGTCCCAGT--CGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGA 116080 || || | |||| | | | || | | | || || ||||||||||| | || | Sbjct 149352 TTAAGTTCAGCCCAATTCCACAATTCTG--TGGGCTTCCTGTCCCACATATCGTATTGAA 149409 Query 116081 GGATACCT-TGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCC 116139 | || ||| || | | ||| ||| ||| |||| || ||||| || |||| | | ||| Sbjct 149410 GAATTCCTCTGCTAACCGGGCT-TCCATCATATGTTTCGTATGGACCATCAAGCGCAGCC 149468 Query 116140 AATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATT 116199 || ||| |||| || || || || || ||| || || ||||| || | ||| | Sbjct 149469 AACTCGCAGCTTGCTTCAAGTGCCCCGAAATAAATGGTTTCAAACATTTGTTGATTTAAC 149528 Query 116200 GCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCT 116259 || ||| || || ||| | | | || ||| || || |||| || | ||| Sbjct 149529 AACTGGGCTTCTTCACTTTCATAAGGATGGCGCATCAAGATGAAAGCATCTGCCATGCCT 149588 Query 116260 TGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACG 116316 || || |||| || || || || || | ||||||||| ||| | ||| || Sbjct 149589 TGCACTCCGATACCTATCGGACGGTGGCGCATATTAGA---TCGCTTTGCTTCCGGGACA 149645 Query 116317 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 116376 ||||| | || ||||||| | | || ||||| || ||| || | | || Sbjct 149646 GGATAGTAGTTGATATCGATGATTTTGTTCAGATTCCGAGTAACAGTTTTGGCTACCTCC 149705 Query 116377 TGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATT 116436 | ||||| || |||| | | ||| || || ||| || | || ||||| Sbjct 149706 TTTAGCTTCGCGAAATCGTATGTACGA---TCGGGTTTTACAAACATGTTTAGAGCGATC 149762 Query 116437 GACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACAC 116496 || |||||||||||||||| | ||||| || || ||| || | |||||| || ||| Sbjct 149763 GAGGCCAGATTACACACAGCAATTTCATCTTTTGAAGAGTATTCCACAATTTCGGTGCAC 149822 Query 116497 AAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 116556 | ||||||| ||| || || || | ||| | ||| || |||| || |||||||| Sbjct 149823 AGGTTTGAACACTTGATCGTTCCAACGTTTTGTTGGTTACTCTTTCGATTGCACGCATCT 149882 Query 116557 TTGTAGAGCATATATGGCGTCCCCGTCTC 116585 ||||||||||| || ||| || ||||| Sbjct 149883 TTGTAGAGCATGTAAGGCACTCCAGTCTC 149911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613505658563160