Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq1 136 6e-27
seq3 129 9e-25
>seq1
Length=37976048
Score = 136 bits (150), Expect = 6e-27
Identities = 331/499 (66%), Gaps = 2/499 (0%)
Strand=Plus/Plus
Query 203833 CTTCGTCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTA 203892
||||| ||||| || || |||||||| || || || || ||| | | | | ||| ||
Sbjct 148838 CTTCGATTTGTCAACGGTAAACTGAATCGCATTAACAGCCGGCTTCGTGCGTAAATAATA 148897
Query 203893 CATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCAC 203952
||| || || || |||||| ||| ||| ||||| | || || || | ||||| |
Sbjct 148898 CATCCCTGTTTTAAGGCCCATCTTCCAGCCGTAGAAATGAATTGATGTTAGTTTACCGTA 148957
Query 203953 GTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATC 204012
||| || || || | |||||| || | |||||| ||| || || || | | | |||||
Sbjct 148958 GTTTGGCTCAGCTACGTGAATATTGAAAGACTGCGATTGATCAATAAATGCCCCTCGATC 149017
Query 204013 TGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCT 204072
|| ||||| || || || ||| || || ||||| ||||| ||| ||| | |
Sbjct 149018 GGCCGCCATTTTAATGCAAGTTTTCACTGATATTTCCCAGACCGTTTTGTACAGATTGCG 149077
Query 204073 GGTGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCA 204131
||||||| || | || || | | || || || || |||| ||||| | |
Sbjct 149078 TATGTGTTGCGGAATTTCCTCT-ATATTTTGTATTGATCCATTGTGGGCCAAGATCTTGT 149136
Query 204132 TCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGA 204191
| || | || || |||| | ||||| |||| ||| | || || | || |
Sbjct 149137 TTTTCATTTCATCATCCCAGAGCTCCAACTCAGTCAGATCCTTTAGCAAATGATGATTCA 149196
Query 204192 TGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGA 204251
| ||||| ||||| || ||||||| ||| || | | ||| ||| | |||||||
Sbjct 149197 CCACTTGAAATTCTCCTGAGAGCACCCTACGGTTGTAGACGTTTGATGTGTACGGTTCGA 149256
Query 204252 ACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCA 204311
| | |||||||||||||| || || || || || || ||||| ||||| || ||||
Sbjct 149257 AAGACTCGTTGTTGCCGAGGATTTGGGCAGTCGAAGCGGTTGGCATAGGAGCTAGTAGCA 149316
Query 204312 GGGAGTTGCGCACACCGTA 204330
| || || |||| ||||||
Sbjct 149317 GCGAATTACGCAAACCGTA 149335
>seq3
Length=33601328
Score = 129 bits (142), Expect = 9e-25
Identities = 227/330 (69%), Gaps = 3/330 (1%)
Strand=Plus/Minus
Query 159741 CCGCCAGCAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCC 159800
|| |||||| || || |||||||| |||||||| |||| | || || || || |
Sbjct 22123654 CCACCAGCAGCCGATCCGCCACAAACTCGATGTACTGGGACATGAGTTCGCAATTCATGC 22123595
Query 159801 CCAGCAGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGG 159860
||| || || || || |||| | ||| ||||||| ||| || | ||||| ||
Sbjct 22123594 CCAACATATCGACTGGCAGTGCTTTGGTCAGGAACTCCTGCTCGATTGCAACCGCATCCC 22123535
Query 159861 TCACAATCTGCGAGACACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGA 159920
| ||| | || ||||| | | | ||||| | || | | ||| |||| ||
Sbjct 22123534 GGATAATGTCCGTCACACGCTTGCGCGATGGCTT---CTGTATCAGATACTTGAACATGA 22123478
Query 159921 GGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGA 159980
| || ||||||||||| |||| || || || || ||||| ||||| ||||| | | |
Sbjct 22123477 GACAGGCAAAGTCGCAATGCAAACCTTCATCGCGCGAGATCAACTCATTGGAGAACGTCA 22123418
Query 159981 GGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAA 160040
|||||||| | |||||| || ||||| || ||||||||||| ||||| || |
Sbjct 22123417 AACCCGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGCCGCAAAGCTGCCGCTGAAGA 22123358
Query 160041 AGATCCCCTCCACGGCCGCAAACGCCACGA 160070
|||| ||||| || || || ||||||||||
Sbjct 22123357 AGATGCCCTCGACAGCTGCGAACGCCACGA 22123328
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795153202172560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |