Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq1 131 2e-25
seq2 116 4e-21
>seq1
Length=37976048
Score = 131 bits (144), Expect = 2e-25
Identities = 162/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| |||||| || | || |||||| ||||| ||||||||||| || || || ||
Sbjct 21735273 CGCAGCACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTACGTCCG 21735332
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| || ||||||||||||||||| || | |||||||| || | ||| | || |||||||
Sbjct 21735333 TCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGCGGAATGCCCTCCTTG 21735392
Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558
||| |||||| ||| | || | | ||| || | || || || | ||||||
Sbjct 21735393 TCCTGGATCTTGGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTGATG 21735452
Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGCAC 46600
|| || ||||| || ||||| || ||||| ||||| |||||
Sbjct 21735453 GTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCGTGCAC 21735494
Score = 129 bits (142), Expect = 7e-25
Identities = 163/223 (73%), Gaps = 6/223 (3%)
Strand=Plus/Minus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| || ||||||| || |||||| ||||| |||||||| || || || || |
Sbjct 36315774 CGCAGTACAAGATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCA 36315715
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| || ||||||||||||||||| |||| |||||||| || | || | | |||||||
Sbjct 36315714 TCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATTCCCTCCTTG 36315655
Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGAT---TCCACATCCACCGTG 46555
||| ||||||| ||| | || | | ||||| |||| || || || | |||
Sbjct 36315654 TCCTGGATCTTCGCCTTCACATTCTCGATGGTGTC---CGATGGCTCGACCTCGAGTGTG 36315598
Query 46556 ATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGC 46598
||||| ||||| || |||||||| || || || ||||||||||
Sbjct 36315597 ATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATTTTGC 36315555
>seq2
Length=51801758
Score = 116 bits (128), Expect = 4e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| || || ||||| || || || |||| || |||||||||||||||||
Sbjct 36664883 CTCCTTCTGGATGTTATAATCGGACAGGGTACGTCCGTCCTCCAGCTGCTTGCCGGCGAA 36664824
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
||||| |||||||| || | || | || |||||||||| |||||| ||| | |
Sbjct 36664823 GATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTT 36664764
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | | || || | ||||| |||| |||||||| ||||| |||| || || ||
Sbjct 36664763 CTCGATGGTATCCGAAGGCTCCACCTCCAGAGTGATGGTCTTGCCAGTCAAGGTCTTCAC 36664704
Query 46582 AAAGATTTGCAT 46593
||||| |||||
Sbjct 36664703 GAAGATCTGCAT 36664692
Score = 102 bits (112), Expect = 9e-17
Identities = 153/216 (71%), Gaps = 6/216 (3%)
Strand=Plus/Plus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|||| |||| ||| |||||| ||||| ||||||||||| || ||||| | || ||
Sbjct 21000395 ACCAAGTGCAGCGTAGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGACCATCCTCC 21000454
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|||||||| || ||||| || | |||||||| || | || | || |||||||||
Sbjct 21000455 AGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGA 21000514
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGAT---TCCACATCCACCGTGATGGTT 46561
||||| ||| | || | | ||| || |||| || || |||| ||||||||
Sbjct 21000515 ATCTTTGCCTTCACGTTCTCAATCGTATC---CGATGGCTCGACCTCCAGAGTGATGGTC 21000571
Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597
|| || ||||| || || || || || ||||| |||
Sbjct 21000572 TTTCCTGTCAGGGTCTTCACGAAAATCTGCATGTTG 21000607
Score = 87.8 bits (96), Expect = 2e-12
Identities = 166/238 (70%), Gaps = 11/238 (5%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|||||| | | ||||| || ||||| | ||| |||| |||| |||| ||
Sbjct 21004559 CCTCCTTTCAGTCGCAAAACAAGATGAATGGTAGAACCCTTGATGATACTGTATTCTTCC 21004500
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| ||||| | || || ||||||||||| ||||| |||| |||||| || | |||
Sbjct 21004499 AGGGTGCGACCATCTTCTAGCTGCTTGCCCGCGAAGATCATGCGCTGTTGAT---TCGGT 21004443
Query 46487 ACGCTCTCCT--TGTCCAT-GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCT--CGATT 46541
| |||||| || ||| ||||| ||||| | || | ||| |||||| || ||
Sbjct 21004442 GGGATCTCCTCACGTTCATCGATCTGTTTCTTCACACTCTCGACC--GTCGCTTCCGGTT 21004385
Query 46542 CCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT-TTTGC 46598
|| ||||| | ||||| ||||| |||| | |||| |||||||| ||||| |||||
Sbjct 21004384 CCGTGTCCACAGCAATGGTCTTGCCGGTCAACATTTTCACAAAGATCTGCATGTTTGC 21004327
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565236979838520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |