Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq3 244 1e-59
seq1 145 8e-30
seq2 116 4e-21
>seq3
Length=33601328
Score = 244 bits (270), Expect = 1e-59
Identities = 313/429 (73%), Gaps = 2/429 (0%)
Strand=Plus/Minus
Query 132711 CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATT 132770
||| || || ||||||| || ||||| ||||||||||| || |||||| |||||||||
Sbjct 22123659 CAGCTCCACCAGCAGCCGATCCGCCACAAACTCGATGTACTGGGACATGAGTTCGCAATT 22123600
Query 132771 AAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGC 132830
| |||| || | || ||||| |||| ||| || || |||||||| || |||||
Sbjct 22123599 CATGCCCAACATATCGACTGGCAGTGCTTTGGTCAGGAACTCCTGCTCGATTGCAACCGC 22123540
Query 132831 GTCGGTGACGATTTCCCTAACGCGCGC-CGCGCTCGGCCGTTGCACCAAATGCTTGAACA 132889
|| || || ||| | || ||| |||| | ||| || | || || ||||||||
Sbjct 22123539 ATCCCGGATAATGTCCGTCACACGCTTGCGCGAT-GGCTTCTGTATCAGATACTTGAACA 22123481
Query 132890 TCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAG 132949
| | || ||||||||||||||||| || || || | || || | || ||| ||| |
Sbjct 22123480 TGAGACAGGCAAAGTCGCAATGCAAACCTTCATCGCGCGAGATCAACTCATTGGAGAACG 22123421
Query 132950 TCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAA 133009
|||| || ||||| ||||| || || || ||||| || ||||| || || ||||| |
Sbjct 22123420 TCAAACCCGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGCCGCAAAGCTGCCGCTGA 22123361
Query 133010 AGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGC 133069
|||||| ||||||||| || ||||| ||||| | ||||||||| | |||| | ||||
Sbjct 22123360 AGAAGATGCCCTCGACAGCTGCGAACGCCACGATACGCTCGCCGTAGTTGGCCTTCTTGC 22123301
Query 133070 TGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGG 133129
| | ||||||| || |||||| || ||||| || || ||||||| ||| |||||||
Sbjct 22123300 TCGAGATCCAGTTCATCGCCCAGTCCGCCTTACGCTTCACACACGGCAGCGTCTCGATGG 22123241
Query 133130 CGTTCAACA 133138
| || ||||
Sbjct 22123240 CATTGAACA 22123232
Score = 163 bits (180), Expect = 3e-35
Identities = 195/262 (74%), Gaps = 2/262 (1%)
Strand=Plus/Minus
Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226
||| |||||||| || ||| ||||| || ||| ||||| ||||| ||||| || ||
Sbjct 22123133 GTATGTGTCGATAAGCAGCGAGTACATCTCGCTGTGCACGTTTTCCATAGCGATCTGGAA 22123074
Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286
|| || || || || ||||| |||||| || || || ||| || |||||||||||
Sbjct 22123073 ACCATAGAAACAGCGAGCCTCCGTCACCTGAACCTCCTGGCTGAACCGTTCGACCAGATT 22123014
Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346
|||||| ||||| || ||| |||||| || ||||| ||||| ||| ||| || || ||
Sbjct 22123013 TTCGTTCACGATACCATCGGAGGCGGCAAAGAAGGCGAGCACATGCGAGATAAAGTGACG 22122954
Query 133347 CTCGTTGTCGTTCAAGCGC-TCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGA 133405
|||| | ||| ||||| |||||||| | ||||||| || || || ||||| ||||
Sbjct 22122953 CTCGCTCGGCTTC-AGCGCATCCCAGTCTTTCATGTCCTTAGATAGATCGACCTCTTCGA 22122895
Query 133406 CGGTCCAAAACGACGCCTCGGC 133427
| ||||| || || || |||||
Sbjct 22122894 CCGTCCAGAAAGAAGCTTCGGC 22122873
>seq1
Length=37976048
Score = 145 bits (160), Expect = 8e-30
Identities = 161/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| ||||| |||||||| || ||||||||| | || |||||| || |
Sbjct 21735487 ATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATCACCCTTGAGGTCGAGCCCTCG 21735428
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | | || | || |||| ||||| ||||| ||||| | || ||
Sbjct 21735427 GATACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCGCCGGATCAG 21735368
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| ||||| | ||| ||||| |||||||| |||| || ||||| ||||||||||
Sbjct 21735367 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAAGACGGACGTACCCTGTCCGACTACAAC 21735308
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||| ||||| ||||||| || ||||||||||
Sbjct 21735307 ATCCAGAAGGAGTCGACGCTTCACCTGGTGCTGCG 21735273
Score = 145 bits (160), Expect = 8e-30
Identities = 163/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|||||||| || ||||| ||||||||||| ||||| |||||||| |||| |||||| |
Sbjct 36315557 AAAATGCAGATTTTCGTGAAAACGCTCACCGGCAAGACCATCACACTCGAGGTCGAGCCA 36315616
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
| |||| | | | | | || | || |||| ||||| |||||||| ||| | ||
Sbjct 36315617 TCGGACACCATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCCCCAGAT 36315676
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||||| || || | ||| ||||| |||||||| || | || ||||| ||||||
Sbjct 36315677 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTTTCGGACTAC 36315736
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||||| ||||| |||| |||||| | || |||||
Sbjct 36315737 AACATCCAGAAGGAGTCGACCCTGCATCTTGTACTGCG 36315774
>seq2
Length=51801758
Score = 116 bits (128), Expect = 4e-21
Identities = 166/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| || || || || || || |||||||| | || |||||| |
Sbjct 21000606 AACATGCAGATTTTCGTGAAGACCCTGACAGGAAAGACCATCACTCTGGAGGTCGAGCCA 21000547
Query 38301 ACCGACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
| || | | || |||| | || | ||| || | ||||| || || |||||| | ||
Sbjct 21000546 TCGGATACGATTGAGAACG-TGAAGGCAAAGATTCAGGACAAGGAAGGCATTCCCCCAGA 21000488
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
|| ||||| || || | ||| || || |||||||| || | ||||| || ||||||
Sbjct 21000487 TCAGCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAGGATGGTCGCACGCTGTCCGACTA 21000428
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||||| ||||| | |||||||| ||||| || ||| || | || ||
Sbjct 21000427 CAACATCCAGAAGGAGTCTACGCTGCACTTGGTCCTACGTCTGCGTGGTGG 21000377
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500171543315840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |