Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq3 122 3e-22 >seq3 Length=33601328 Score = 122 bits (134), Expect = 3e-22 Identities = 172/242 (71%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 451208 CAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTT 451267 ||||| | || || || || | ||| | ||| ||| |||||| | ||||| ||||| Sbjct 573447 CAAGTGGAATACAAGGGCGAGAAGAAATCGTTTTTTCCAGAAGAAGTCTCATCAATGGTG 573388 Query 451268 CTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTA 451327 |||||||||||||| ||||| || ||| || |||| || | |||| || Sbjct 573387 CTTACTAAAATGAAGGAAACTGCTGAAGCTTACCTTGGAAAGAATATTGCAAATGCGGTT 573328 Query 451328 ATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACAT 451387 || || || || || || || |||||| | || || || || || || |||||||| Sbjct 573327 ATAACAGTACCTGCGTACTTTAATGATTCTCAGCGTCAGGCCACAAAGGATGCAGGTGCA 573268 Query 451388 ATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATAT 451447 ||||||||||||||||| | || || || |||||||| ||||| ||||| | ||||| Sbjct 573267 ATTGCTGGTTTAAATGTGTTGCGTATCATCAATGAACCGACAGCTGCTGCAATTGCATAC 573208 Query 451448 GG 451449 || Sbjct 573207 GG 573206 Score = 105 bits (116), Expect = 3e-17 Identities = 331/507 (65%), Gaps = 12/507 (2%) Strand=Plus/Minus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTT-C 452049 || || || |||||||| |||||||| |||||||| ||||| || || || ||| | Sbjct 572667 AACCCCGACGAAGCTGTCGCATATGGCGCTGCAGTGCAAGCGGCAATCTTACAAGGAGAC 572608 Query 452050 AGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGT 452109 | || || | ||| | || || | ||||| ||||| || || | ||| | Sbjct 572607 ACATCG-GAGGCGGTGCAGGATTTACTTTTGCTGGATGTTACACCACTGTCGTTAGGAAT 572549 Query 452110 TGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAA 452169 ||||| || || ||| | ||||| | | || || ||| || |||| || || Sbjct 572548 CGAAACGGCCGGAGGAGTCATGACCGTTCTGATCAAGCGAAATACCACTATACCGACGAA 572489 Query 452170 AAAGAGTCAAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTT 452229 | | |||||||| | |||| || || ||||| || || |||||||| || Sbjct 572488 GCAAACCCAAACATTCACTACATACTCGGACAATCAACCTGGGGTTCTAATTCAAGTATT 572429 Query 452230 TGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTT--ACTCTTTCA 452287 |||||||||||| || ||||| ||| || ||| || || ||||| |||| | Sbjct 572428 TGAAGGAGAACGCGCTATGACGAAAGACAACAATCTTCTTGGTAAATTTGAACTCAGTGG 572369 Query 452288 AACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCA 452347 | |||| || ||| | ||| || || ||||| | || | ||| ||||||| Sbjct 572368 TA--TTCCACCCGCTCCACGTGGAGTACCGCAGATTGAGGTCACATTCGATATTGATGCT 572311 Query 452348 AATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAA---ATT 452404 || ||||| | ||||| ||| |||| ||||| || ||| ||||| || Sbjct 572310 AACGGTATCATGAATGTATCTGCTATTGAGAAATCGACTAACAAA---GAAAATCGGATA 572254 Query 452405 ACAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAA 452464 ||||||||||| ||||| ||| || ||| || || || || ||||| |||| Sbjct 572253 ACAATTACTAACGATAAGGGACGTCTAAGTAAGGAGGACATCGATCGTATGGTTAATGAG 572194 Query 452465 GCAGAAAAATTCAAGGATGATGATGAA 452491 |||||||| ||| |||| |||||| Sbjct 572193 GCAGAAAAGTTCCGCAATGAGGATGAA 572167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975713311907708