Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01]
201 sequences; 173,339,239 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq3 122 3e-22
>seq3
Length=33601328
Score = 122 bits (134), Expect = 3e-22
Identities = 172/242 (71%), Gaps = 0/242 (0%)
Strand=Plus/Minus
Query 451208 CAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTT 451267
||||| | || || || || | ||| | ||| ||| |||||| | ||||| |||||
Sbjct 573447 CAAGTGGAATACAAGGGCGAGAAGAAATCGTTTTTTCCAGAAGAAGTCTCATCAATGGTG 573388
Query 451268 CTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTA 451327
|||||||||||||| ||||| || ||| || |||| || | |||| ||
Sbjct 573387 CTTACTAAAATGAAGGAAACTGCTGAAGCTTACCTTGGAAAGAATATTGCAAATGCGGTT 573328
Query 451328 ATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACAT 451387
|| || || || || || || |||||| | || || || || || || ||||||||
Sbjct 573327 ATAACAGTACCTGCGTACTTTAATGATTCTCAGCGTCAGGCCACAAAGGATGCAGGTGCA 573268
Query 451388 ATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATAT 451447
||||||||||||||||| | || || || |||||||| ||||| ||||| | |||||
Sbjct 573267 ATTGCTGGTTTAAATGTGTTGCGTATCATCAATGAACCGACAGCTGCTGCAATTGCATAC 573208
Query 451448 GG 451449
||
Sbjct 573207 GG 573206
Score = 105 bits (116), Expect = 3e-17
Identities = 331/507 (65%), Gaps = 12/507 (2%)
Strand=Plus/Minus
Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTT-C 452049
|| || || |||||||| |||||||| |||||||| ||||| || || || ||| |
Sbjct 572667 AACCCCGACGAAGCTGTCGCATATGGCGCTGCAGTGCAAGCGGCAATCTTACAAGGAGAC 572608
Query 452050 AGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGT 452109
| || || | ||| | || || | ||||| ||||| || || | ||| |
Sbjct 572607 ACATCG-GAGGCGGTGCAGGATTTACTTTTGCTGGATGTTACACCACTGTCGTTAGGAAT 572549
Query 452110 TGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAA 452169
||||| || || ||| | ||||| | | || || ||| || |||| || ||
Sbjct 572548 CGAAACGGCCGGAGGAGTCATGACCGTTCTGATCAAGCGAAATACCACTATACCGACGAA 572489
Query 452170 AAAGAGTCAAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTT 452229
| | |||||||| | |||| || || ||||| || || |||||||| ||
Sbjct 572488 GCAAACCCAAACATTCACTACATACTCGGACAATCAACCTGGGGTTCTAATTCAAGTATT 572429
Query 452230 TGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTT--ACTCTTTCA 452287
|||||||||||| || ||||| ||| || ||| || || ||||| |||| |
Sbjct 572428 TGAAGGAGAACGCGCTATGACGAAAGACAACAATCTTCTTGGTAAATTTGAACTCAGTGG 572369
Query 452288 AACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCA 452347
| |||| || ||| | ||| || || ||||| | || | ||| |||||||
Sbjct 572368 TA--TTCCACCCGCTCCACGTGGAGTACCGCAGATTGAGGTCACATTCGATATTGATGCT 572311
Query 452348 AATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAA---ATT 452404
|| ||||| | ||||| ||| |||| ||||| || ||| ||||| ||
Sbjct 572310 AACGGTATCATGAATGTATCTGCTATTGAGAAATCGACTAACAAA---GAAAATCGGATA 572254
Query 452405 ACAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAA 452464
||||||||||| ||||| ||| || ||| || || || || ||||| ||||
Sbjct 572253 ACAATTACTAACGATAAGGGACGTCTAAGTAAGGAGGACATCGATCGTATGGTTAATGAG 572194
Query 452465 GCAGAAAAATTCAAGGATGATGATGAA 452491
|||||||| ||| |||| ||||||
Sbjct 572193 GCAGAAAAGTTCCGCAATGAGGATGAA 572167
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975713311907708
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |