Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1 178 2e-39 >seq1 Length=37976048 Score = 178 bits (196), Expect = 2e-39 Identities = 791/1235 (64%), Gaps = 36/1235 (3%) Strand=Plus/Minus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 ||||| ||||| ||||||| || || ||||| || ||||| | ||| |||||| ||| Sbjct 150607 CCACAACACATGCTCATGCGTGTTGCTATCGGCATACATGGTGCAGACATTGATGCTGCA 150548 Query 111672 TTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 | ||||| ||| || | |||| | | || || | ||||| | |||||| | || Sbjct 150547 ATTGAGACGTACAACTTGCTGTCTGAGCGATACTTT-ACGCACGCCTCGCCAACCATGTT 150489 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 || | || | | |||| ||| |||| || ||||| | ||| ||| || Sbjct 150488 TGCTGCAGCAACTCAACGACCACAACTGTCGTCCTGCTTCCTGCTGACAATGTCGGACGA 150429 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 | ||| | || ||||||| ||||||| | ||||| ||||| || | ||| || Sbjct 150428 TAGCATCGAGGGAATTTACGATACTCTCAAACAGTGTGCATTGATCTCTAAATCGGCCGG 150369 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAG-AGGTACA 111908 ||| || || | | | ||| | | ||||| || || | ||| ||| ||| || Sbjct 150368 TGGCATAGGTCTTAATGTGCATTGTATTAGAGCTAA--AGGAACATATATAGCAGGAACG 150311 Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968 |||||| ||| | || | | || ||||| || || | ||| |||||||| || Sbjct 150310 AATGGTATATCCAACGGGTTAGTACCTATGCTGCGTGTCTACAACAATACAGCGCGTTAC 150251 Query 111969 GTAAACCAAGCTGGGCGTCGCAAGGGATCTATCGCAGTC------TATCTTGAGCCATGG 112022 || |||| | ||| | |||| || || ||| | ||| | ||||||||| Sbjct 150250 GTGGACCAGGGTGG---TAACAAGCGACCTGGGGCATTTGCTATTTATTTGGAGCCATGG 150194 Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CGC 112080 || | |||||| | ||||| | || | ||| || | || |||| ||| Sbjct 150193 CATGGGGATATATTTGAGTTTTTGGACCTTAAAAAGAACACGGGAAAAGAAGAGGTCCGC 150134 Query 112081 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 112140 | | | || | |||| |||||| |||||||| ||| | |||||| || | || || | Sbjct 150133 GCTA--GAGACATGTTCTACGCTCTGTGGATTCCTGATTTGTTCATGCAGCGTGTCGAAG 150076 Query 112141 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGG 112200 | | | ||| | | | || || || | || ||| | || || | || Sbjct 150075 CAAACGAAATGTGGAGTTTAATGTGCCCCCACGATTGTCCTGGTTTGTCGGAGACATGGG 150016 Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGG 112260 |||||||||| || |||||||| |||||| || |||| || ||||| | Sbjct 150015 GTGAGGAGTTCCAAAAACTCTACACTGGCTACGAGCGCGAGGGTCGTTTCAC-GCGACAG 149957 Query 112261 TGCCAGCTGCC-GATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 112319 || || ||| ||||| || || | |||| || |||||||| || Sbjct 149956 GTTAAGGCGCAAGATTTGTGGTTCGCCATCATAGAGTCGCAGGTTGAGACTGGAGTGCCT 149897 Query 112320 TATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 112379 || ||||| |||||||| || || || | ||||||||| ||| | || | || |||| Sbjct 149896 TACATGCTCTACAAAGATGCGTGCAATCGAAAGAGTAACCAACAAAACGTTGGAACGATC 149837 Query 112380 AAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 112439 ||| |||| ||||| || || ||||| |||||| | |||||||| | |||||| Sbjct 149836 AAGTGTTCAAACCTGTGCACCGAAATTGTGGAATACTCTTCAAAAGATGAAATTGCTGTG 149777 Query 112440 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGAT 112499 ||||| || || || |||||||| || || ||| | || || |||| ||| Sbjct 149776 TGTAATCTGGCCTCGATCGCTCTAAACATGTTTGTAAAACCCGA---TCGTACATACGAT 149720 Query 112500 TATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGAT 112559 | | || || | || || | |||||||| || || || |||| | | || ||| Sbjct 149719 TTCGCGAAGCTAAAGGAGGTAGCCAAAACTGTTACTCGGAATCTGAACAAAATCATCGAT 149660 Query 112560 AGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGT 112619 | || | || || || | || |||||||||| | |||||||| || ||| Sbjct 149659 ATCAACTACTATCCTGTCCCGGAAGCAAAGCGATCTAATATGCGCCACCGTCCGATAGGT 149600 Query 112620 CTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGT-CGCCACGCATTTGATTCCGA 112678 |||| || ||||| | || |||| |||| |||| | ||||| | | ||| || Sbjct 149599 ATCGGAGTGCAAGGCATGGCAGATGCTTTCA-TCTTGATGCGCCATCCTTATGAAAGTGA 149541 Query 112679 CGAAGCGAAG----GAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTG 112734 ||||| || ||||||| | || ||||| || || ||| || || |||| Sbjct 149540 AGAAGCCCAGTTGTTAAATCAA----CAAATGTTTGAAACCATTTATTTCGGGGCACTTG 149485 Query 112735 AGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAG 112794 | || || | |||||||| | | ||||||||||||| ||||| | ||| || || | Sbjct 149484 AAGCAAGCTGCGAGTTGGCTGCGCTTGATGGTCCATACGAAACATATGATGG-AAGCCCG 149426 Query 112795 CTTCACA-AGGGGTGCTTCAATTTGATATGTGGGA 112828 || || ||| | ||||||| ||||||||||| Sbjct 149425 GTTAGCAGAGGAATTCTTCAATACGATATGTGGGA 149391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620740840384720