Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20albimanus_20[genbank_20GCA_5F000349125.2_202017-08-01] 201 sequences; 173,339,239 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1 134 2e-26 >seq1 Length=37976048 Score = 134 bits (148), Expect = 2e-26 Identities = 728/1158 (63%), Gaps = 28/1158 (2%) Strand=Plus/Plus Query 106167 CAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCAT 106226 ||||||| || ||||| || || || | || ||| ||||||||||| || | || Sbjct 149464 CAGCCAACTCGCAGCTTGCTTCAAGTGCCCCGAAATAAATGGTTTCAAACATTTGTTGAT 149523 Query 106227 TCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGA 106286 | | | || |||||| || ||| | | | ||| ||| || || |||| || | Sbjct 149524 TTAACAACTGGGCTTCTTCACTTTCATAAGGATGGCGCATCAAGATGAAAGCATCTGCCA 149583 Query 106287 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA- 106345 ||||| || || | ||| || || | ||| ||||||||||| |||| | || Sbjct 149584 TGCCTTGCACTCCGATACCTATCGGACGGTGGCGCATATTAGA---TCGCTTTGCTTCCG 149640 Query 106346 --ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 106403 || ||||| | || | || |||| | ||| ||||| |||||| | || | | Sbjct 149641 GGACAGGATAGTAGTTGATATCGATGATTTTGTTCAGATTCCGAGTAACAGTTTTGGCTA 149700 Query 106404 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGG 106463 || | || || | |||| | || ||| || || ||| || | || | Sbjct 149701 CCTCCTTTAGCTTCGCGAAATCGTATGTACGA---TCGGGTTTTACAAACATGTTTAGAG 149757 Query 106464 CGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTG 106523 |||| || |||| ||| || ||||| | ||||| || | ||| || | |||||| | Sbjct 149758 CGATCGAGGCCAGATTACACACAGCAATTTCATCTTTTGAAGAGTATTCCACAATTTCGG 149817 Query 106524 TACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACG 106583 | |||| ||| |||| ||| ||||| || | || | ||||||||||||| ||||||| Sbjct 149818 TGCACAGGTTTGAACACTTGATCGTTCCAACGTTTTGTTGGTTACTCTTTCGATTGCACG 149877 Query 106584 CATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCC 106643 |||| |||||||||||||| ||| || ||||| ||| |||| | || || || Sbjct 149878 CATCTTTGTAGAGCATGTAAGGCACTCCAGTCTCAACCTGCGACTCTATGATGGCGAACC 149937 Query 106644 ACACATC-GGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAG 106702 ||| ||| ||| || | | ||| || || ||||| |||||| |||||| Sbjct 149938 ACAAATCTTGCGCCTTAACCTGTCGCG-TGAAACGACCCTCGCGCTCGTAGCCAGTGTAG 149996 Query 106703 AGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAA 106762 || || |||||||||||| | || || | ||| || | || || || | Sbjct 149997 AGTTTTTGGAACTCCTCACCCCATGTCTCCGACAAACCAGGACAATCGTGGGGGCACATT 150056 Query 106763 AGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGAT 106822 | | ||| | | || || |||| |||||| | || ||||||||||| | Sbjct 150057 AAACTCCACATTTCGTTTGCTTCGACACGCTGCATGAACAAATCAGGAATCCACAGAGCG 150116 Query 106823 GAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAAC 106882 | || | |||||| || ||||||| | || ||| | | || | ||| Sbjct 150117 TAGAACATGTCTCTAGCGCGGACCTCTTCTTTTCCCGTGTTCTTTTTAAGGTCCAAAAAC 150176 Query 106883 TCCATGATATCCGCGTGCCATGGCTCAAGATA------GACTGCGATAGATCCCTTTCGA 106936 || | |||||| | ||||||||||| | ||| | ||| || || ||| | Sbjct 150177 TCAAATATATCCCCATGCCATGGCTCCAAATAAATAGCAAATGCCCCAGGTCGCTTGTTA 150236 Query 106937 CGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATA 106996 ||| | || | || || |||||||| ||| | || || ||||| || | | Sbjct 150237 ---CCACCCTGGTCCACGTAACGCGCTGTATTGTTGTAGACACGCAGCATAGGTACTAAC 150293 Query 106997 CCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATG 107056 || | ||| |||||| || || ||| | | || ||||| | | ||| | Sbjct 150294 CCGTTGGATATACCATTCGTTCCTGCTATATATGTTCCTTTAGCTCTAATACAATGCACA 150353 Query 107057 TGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAG 107116 | | || || || || ||| | || ||||| ||||||| | ||||| | || Sbjct 150354 TTAAGACCTATGCCACCGGCCGATTTAGAGATCAATGCACACTGTTTGAGAGTATCGTAA 150413 Query 107117 ATACCGTTGATTGAGTCCTCC----TTGTTGGCGATAAGGAAGCAACTGGACATCTGCGG 107172 || || | ||| || ||| |||| || |||||||| |||| || || Sbjct 150414 ATTCCCTCGATGCTATCGTCCGACATTGTCAGC----AGGAAGCAGGACGACAGTTGTGG 150469 Query 107173 TCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACAT 107232 || | | || | ||| || | |||||| | ||||| | || | | |||| Sbjct 150470 TCGTTGAGTTGCTGCAGCAAACATGGTTGGCGAGGCGTGCGTAAAGTATCGCTCAGACAG 150529 Query 107233 CTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACG 107292 | || ||| ||||| | ||| |||||||||| | || || |||||||| || ||||| Sbjct 150530 CAAGTTGTACGTCTCAATTGCAGCATCAATGTCTGCACCATGTATGCCGATAGCAACACG 150589 Query 107293 CATAAACATGTATTGGGG 107310 ||| | ||||| ||| || Sbjct 150590 CATGAGCATGTGTTGTGG 150607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979317673240